RNA–Protein interactions for RNA: ENST00000358511.10

COL6A6-201, Transcript of collagen type VI alpha 6 chain, humanhuman

APPRIS P1 TSL 5 BASIC

Gene COL6A6, Length 9,581 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL6A6-201ENST00000358511 OCM2P0CE71 109 aa9.25□□□□□ -0.93
COL6A6-201ENST00000358511 OCMP0CE72 109 aaPredicted RBP9.25□□□□□ -0.93
COL6A6-201ENST00000358511 GHRP10912 638 aa9.25□□□□□ -0.93
COL6A6-201ENST00000358511 EIF2B2P49770 351 aaKnown RBP9.25□□□□□ -0.93
COL6A6-201ENST00000358511 SLC29A2Q14542 456 aa9.25□□□□□ -0.93
COL6A6-201ENST00000358511 R3HDM1Q15032 1099 aaKnown RBP9.25□□□□□ -0.93
COL6A6-201ENST00000358511 ZKSCAN4Q969J2 545 aaPredicted RBP9.25□□□□□ -0.93
COL6A6-201ENST00000358511 ICA1Q05084 483 aa9.25□□□□□ -0.93
COL6A6-201ENST00000358511 TMC2Q8TDI7 906 aa9.25□□□□□ -0.93
COL6A6-201ENST00000358511 TMA16Q96EY4 203 aaKnown RBP9.25□□□□□ -0.93
COL6A6-201ENST00000358511 ACSBG1Q96GR2 724 aa9.25□□□□□ -0.93
COL6A6-201ENST00000358511 ACAP3Q96P50 834 aa9.25□□□□□ -0.93
COL6A6-201ENST00000358511 PCIF1Q9H4Z3 704 aa9.25□□□□□ -0.93
COL6A6-201ENST00000358511 RMI1Q9H9A7 625 aa9.25□□□□□ -0.93
COL6A6-201ENST00000358511 GOLGA8RI6L899 631 aa9.25□□□□□ -0.93
COL6A6-201ENST00000358511 BLVRAP53004 296 aa9.25□□□□□ -0.93
COL6A6-201ENST00000358511 PREPLQ4J6C6 727 aaPredicted RBP9.25□□□□□ -0.93
COL6A6-201ENST00000358511 POLE3Q9NRF9 147 aa9.25□□□□□ -0.93
COL6A6-201ENST00000358511 MAGED2Q9UNF1 606 aaPredicted RBP9.25□□□□□ -0.93
COL6A6-201ENST00000358511 MEIS1O00470 390 aa9.25□□□□□ -0.93
COL6A6-201ENST00000358511 AHCYL1O43865 530 aa9.25□□□□□ -0.93
COL6A6-201ENST00000358511 CAND2O75155 1236 aa9.25□□□□□ -0.93
COL6A6-201ENST00000358511 TFAMQ00059 246 aaKnown RBP9.25□□□□□ -0.93
COL6A6-201ENST00000358511 ZYXQ15942 572 aaKnown RBP9.25□□□□□ -0.93
COL6A6-201ENST00000358511 DDB1Q16531 1140 aa9.25□□□□□ -0.93
COL6A6-201ENST00000358511 PFKFB3Q16875 520 aaPredicted RBP9.25□□□□□ -0.93
COL6A6-201ENST00000358511 ANGPTL8Q6UXH0 198 aa9.25□□□□□ -0.93
COL6A6-201ENST00000358511 FRA10AC1Q70Z53 315 aa9.25□□□□□ -0.93
COL6A6-201ENST00000358511 ERICH1Q86X53 443 aa9.25□□□□□ -0.93
COL6A6-201ENST00000358511 CCNYL1Q8N7R7 359 aa9.25□□□□□ -0.93
COL6A6-201ENST00000358511 MDM1Q8TC05 714 aa9.25□□□□□ -0.93
COL6A6-201ENST00000358511 SLC7A3Q8WY07 619 aa9.25□□□□□ -0.93
COL6A6-201ENST00000358511 TUBE1Q9UJT0 475 aa9.25□□□□□ -0.93
COL6A6-201ENST00000358511 TMEM247A6NEH6 219 aa9.25□□□□□ -0.93
COL6A6-201ENST00000358511 A1BGP04217 495 aa9.25□□□□□ -0.93
COL6A6-201ENST00000358511 DPYDQ12882 1025 aa9.25□□□□□ -0.93
COL6A6-201ENST00000358511 TRADDQ15628 312 aa9.25□□□□□ -0.93
COL6A6-201ENST00000358511 ARL13BQ3SXY8 428 aa9.25□□□□□ -0.93
COL6A6-201ENST00000358511 SCUBE1Q8IWY4 988 aa9.25□□□□□ -0.93
COL6A6-201ENST00000358511 BBS5Q8N3I7 341 aa9.25□□□□□ -0.93
COL6A6-201ENST00000358511 ANKZF1Q9H8Y5 726 aa9.25□□□□□ -0.93
COL6A6-201ENST00000358511 ALG13Q9NP73 1137 aaKnown RBP9.25□□□□□ -0.93
COL6A6-201ENST00000358511 PRR23D1E9PI22 279 aaPredicted RBP9.25□□□□□ -0.93
COL6A6-201ENST00000358511 SPAG6O75602 509 aa9.25□□□□□ -0.93
COL6A6-201ENST00000358511 PRR23D2P0DMB1 279 aaPredicted RBP9.25□□□□□ -0.93
COL6A6-201ENST00000358511 VCAM1P19320 739 aa9.25□□□□□ -0.93
COL6A6-201ENST00000358511 CACNA2D1P54289 1103 aa9.25□□□□□ -0.93
COL6A6-201ENST00000358511 TCP10Q12799 353 aa9.25□□□□□ -0.93
COL6A6-201ENST00000358511 CROCCP3Q8IVE0 287 aa9.25□□□□□ -0.93
COL6A6-201ENST00000358511 RNF217Q8TC41 542 aa9.25□□□□□ -0.93
COL6A6-201ENST00000358511 MARCOQ9UEW3 520 aaPredicted RBP9.25□□□□□ -0.93
COL6A6-201ENST00000358511 SLC13A4Q9UKG4 626 aa9.25□□□□□ -0.93
COL6A6-201ENST00000358511 ERVV-2B6SEH9 535 aa9.24□□□□□ -0.93
COL6A6-201ENST00000358511 TAP1Q03518 808 aa9.24□□□□□ -0.93
COL6A6-201ENST00000358511 JAMLQ86YT9 394 aa9.24□□□□□ -0.93
COL6A6-201ENST00000358511 KIAA0825Q8IV33 1275 aa9.24□□□□□ -0.93
COL6A6-201ENST00000358511 SLC35G2Q8TBE7 412 aa9.24□□□□□ -0.93
COL6A6-201ENST00000358511 MPP4Q96JB8 637 aa9.24□□□□□ -0.93
COL6A6-201ENST00000358511 LBHD1Q9BQE6 289 aaPredicted RBP9.24□□□□□ -0.93
COL6A6-201ENST00000358511 FSD1LQ9BXM9 530 aa9.24□□□□□ -0.93
COL6A6-201ENST00000358511 ATAD3AQ9NVI7 634 aa9.24□□□□□ -0.93
COL6A6-201ENST00000358511 RTN2O75298 545 aa9.24□□□□□ -0.93
COL6A6-201ENST00000358511 SLC4A1P02730 911 aa9.24□□□□□ -0.93
COL6A6-201ENST00000358511 TYK2P29597 1187 aa9.24□□□□□ -0.93
COL6A6-201ENST00000358511 WLSQ5T9L3 541 aa9.24□□□□□ -0.93
COL6A6-201ENST00000358511 EXOC8Q8IYI6 725 aa9.24□□□□□ -0.93
COL6A6-201ENST00000358511 SLC9A2Q9UBY0 812 aa9.24□□□□□ -0.93
COL6A6-201ENST00000358511 UGGT1Q9NYU2 1555 aa9.24□□□□□ -0.93
COL6A6-201ENST00000358511 NCKAP5LQ9HCH0 1330 aa9.24□□□□□ -0.93
COL6A6-201ENST00000358511 MYO5BQ9ULV0 1848 aa9.24□□□□□ -0.93
COL6A6-201ENST00000358511 DISP1Q96F81 1524 aa9.24□□□□□ -0.93
COL6A6-201ENST00000358511 LZTS3O60299 673 aaPredicted RBP9.24□□□□□ -0.93
COL6A6-201ENST00000358511 CLK1P49759 484 aaKnown RBP9.24□□□□□ -0.93
COL6A6-201ENST00000358511 RUNX1T1Q06455 604 aa9.24□□□□□ -0.93
COL6A6-201ENST00000358511 TFDP2Q14188 446 aa9.24□□□□□ -0.93
COL6A6-201ENST00000358511 SWT1Q5T5J6 900 aaKnown RBP9.24□□□□□ -0.93
COL6A6-201ENST00000358511 ARHGEF1Q92888 912 aaKnown RBP9.24□□□□□ -0.93
COL6A6-201ENST00000358511 TRIM63Q969Q1 353 aa9.24□□□□□ -0.93
COL6A6-201ENST00000358511 TUBGCP3Q96CW5 907 aa9.24□□□□□ -0.93
COL6A6-201ENST00000358511 TMBIM4Q9HC24 238 aa9.24□□□□□ -0.93
COL6A6-201ENST00000358511 TBXAS1P24557 533 aaPredicted RBP9.24□□□□□ -0.93
COL6A6-201ENST00000358511 GYG1P46976 350 aa9.24□□□□□ -0.93
COL6A6-201ENST00000358511 HSPA2P54652 639 aa9.24□□□□□ -0.93
COL6A6-201ENST00000358511 SYN2Q92777 582 aaPredicted RBP9.24□□□□□ -0.93
COL6A6-201ENST00000358511 NEDD4P46934 1319 aa9.24□□□□□ -0.93
COL6A6-201ENST00000358511 A8MXQ7 604 aa9.24□□□□□ -0.93
COL6A6-201ENST00000358511 TLR3O15455 904 aaKnown RBP9.24□□□□□ -0.93
COL6A6-201ENST00000358511 CSPG5O95196 566 aa9.24□□□□□ -0.93
COL6A6-201ENST00000358511 MLH1P40692 756 aa9.24□□□□□ -0.93
COL6A6-201ENST00000358511 ROR2Q01974 943 aaKnown RBP9.24□□□□□ -0.93
COL6A6-201ENST00000358511 SURF1Q15526 300 aa9.24□□□□□ -0.93
COL6A6-201ENST00000358511 LVRNQ6Q4G3 990 aa9.24□□□□□ -0.93
COL6A6-201ENST00000358511 PRUNE1Q86TP1 453 aa9.24□□□□□ -0.93
COL6A6-201ENST00000358511 ZNF184Q99676 751 aaPredicted RBP9.24□□□□□ -0.93
COL6A6-201ENST00000358511 MTA3Q9BTC8 594 aa9.24□□□□□ -0.93
COL6A6-201ENST00000358511 NCAPD2Q15021 1401 aa9.24□□□□□ -0.93
COL6A6-201ENST00000358511 PNMA6FA0A0J9YX94 578 aa9.24□□□□□ -0.93
COL6A6-201ENST00000358511 PSMA4P25789 261 aaKnown RBP9.24□□□□□ -0.93
COL6A6-201ENST00000358511 PLEKHA7Q6IQ23 1121 aa9.24□□□□□ -0.93
COL6A6-201ENST00000358511 CLEC4FQ8N1N0 589 aa9.24□□□□□ -0.93
Retrieved 100 of 20,778 RNA–protein pairs in 60.4 ms