RNA–Protein interactions for RNA: ENST00000357732.8

RTN4-204, Transcript of reticulon 4, humanhuman

TSL 1 (best) BASIC

Gene RTN4, Length 2,390 nt, Biotype protein coding, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RTN4-204ENST00000357732 CHURC1Q8WUH1 139 aa18.96■□□□□ 0.63
RTN4-204ENST00000357732 DYDC1Q8WWB3 177 aa18.96■□□□□ 0.63
RTN4-204ENST00000357732 KIFAP3Q92845 792 aa18.96■□□□□ 0.63
RTN4-204ENST00000357732 ZNF622Q969S3 477 aaKnown RBP eCLIP18.96■□□□□ 0.632e-35■□□□□ 10.6
RTN4-204ENST00000357732 VEZTQ9HBM0 779 aa18.96■□□□□ 0.63
RTN4-204ENST00000357732 HERC5Q9UII4 1024 aaKnown RBP18.96■□□□□ 0.63
RTN4-204ENST00000357732 COQ4Q9Y3A0 265 aa18.96■□□□□ 0.63
RTN4-204ENST00000357732 LYPLA2O95372 231 aa18.96■□□□□ 0.63
RTN4-204ENST00000357732 SGPL1O95470 568 aa18.96■□□□□ 0.63
RTN4-204ENST00000357732 P4HBP07237 508 aaKnown RBP18.96■□□□□ 0.63
RTN4-204ENST00000357732 GCLMP48507 274 aa18.96■□□□□ 0.63
RTN4-204ENST00000357732 FMO1Q01740 532 aa18.96■□□□□ 0.63
RTN4-204ENST00000357732 LMNB2Q03252 620 aa18.96■□□□□ 0.63
RTN4-204ENST00000357732 PTK6Q13882 451 aa18.96■□□□□ 0.63
RTN4-204ENST00000357732 CEP128Q6ZU80 1094 aa18.96■□□□□ 0.63
RTN4-204ENST00000357732 BANK1Q8NDB2 785 aa18.96■□□□□ 0.63
RTN4-204ENST00000357732 PSPC1Q8WXF1 523 aaKnown RBP18.96■□□□□ 0.63
RTN4-204ENST00000357732 ARHGEF2Q92974 986 aaKnown RBP18.96■□□□□ 0.63
RTN4-204ENST00000357732 MASTLQ96GX5 879 aa18.96■□□□□ 0.63
RTN4-204ENST00000357732 SNF8Q96H20 258 aa18.96■□□□□ 0.63
RTN4-204ENST00000357732 TDRD3Q9H7E2 651 aaKnown RBP18.96■□□□□ 0.63
RTN4-204ENST00000357732 SLX4Q8IY92 1834 aa18.96■□□□□ 0.62
RTN4-204ENST00000357732 ECE2O60344 883 aa18.95■□□□□ 0.62
RTN4-204ENST00000357732 ALADP13716 330 aa18.95■□□□□ 0.62
RTN4-204ENST00000357732 PPARDQ03181 441 aa18.95■□□□□ 0.62
RTN4-204ENST00000357732 TNIP1Q15025 636 aa18.95■□□□□ 0.62
RTN4-204ENST00000357732 GALNTL6Q49A17 601 aa18.95■□□□□ 0.62
RTN4-204ENST00000357732 BBOF1Q8ND07 529 aa18.95■□□□□ 0.62
RTN4-204ENST00000357732 ZNF653Q96CK0 615 aa18.95■□□□□ 0.62
RTN4-204ENST00000357732 MOV10L1Q9BXT6 1211 aaKnown RBP18.95■□□□□ 0.62
RTN4-204ENST00000357732 TMEM117Q9H0C3 514 aa18.95■□□□□ 0.62
RTN4-204ENST00000357732 ACTL7BQ9Y614 415 aa18.95■□□□□ 0.62
RTN4-204ENST00000357732 TTC4O95801 387 aa18.95■□□□□ 0.62
RTN4-204ENST00000357732 GAS8O95995 478 aa18.95■□□□□ 0.62
RTN4-204ENST00000357732 PDE6BP35913 854 aa18.95■□□□□ 0.62
RTN4-204ENST00000357732 SLC1A1P43005 524 aa18.95■□□□□ 0.62
RTN4-204ENST00000357732 SGO2Q562F6 1265 aa18.95■□□□□ 0.62
RTN4-204ENST00000357732 RELL1Q8IUW5 271 aa18.95■□□□□ 0.62
RTN4-204ENST00000357732 IFT74Q96LB3 600 aa18.95■□□□□ 0.62
RTN4-204ENST00000357732 MXRA8Q9BRK3 442 aa18.95■□□□□ 0.62
RTN4-204ENST00000357732 EBF2Q9HAK2 575 aa18.95■□□□□ 0.62
RTN4-204ENST00000357732 ZNF219Q9P2Y4 722 aaPredicted RBP18.95■□□□□ 0.62
RTN4-204ENST00000357732 TMX2Q9Y320 296 aa18.95■□□□□ 0.62
RTN4-204ENST00000357732 ZNF646O15015 1829 aaPredicted RBP18.94■□□□□ 0.62
RTN4-204ENST00000357732 GJB6O95452 261 aa18.94■□□□□ 0.62
RTN4-204ENST00000357732 SLCO1A2P46721 670 aa18.94■□□□□ 0.62
RTN4-204ENST00000357732 GPC3P51654 580 aa18.94■□□□□ 0.62
RTN4-204ENST00000357732 UBXN2AP68543 259 aa18.94■□□□□ 0.62
RTN4-204ENST00000357732 KRT17Q04695 432 aa18.94■□□□□ 0.62
RTN4-204ENST00000357732 DHX30Q7L2E3 1194 aaKnown RBP eCLIP18.94■□□□□ 0.623e-7■□□□□ 8.1
RTN4-204ENST00000357732 USP37Q86T82 979 aa18.94■□□□□ 0.62
RTN4-204ENST00000357732 NLGN1Q8N2Q7 840 aa18.94■□□□□ 0.62
RTN4-204ENST00000357732 C7orf43Q8WVR3 580 aa18.94■□□□□ 0.62
RTN4-204ENST00000357732 GRAMD1AQ96CP6 724 aa18.94■□□□□ 0.62
RTN4-204ENST00000357732 LGALS13Q9UHV8 139 aa18.94■□□□□ 0.62
RTN4-204ENST00000357732 EXOC7Q9UPT5 735 aa18.94■□□□□ 0.62
RTN4-204ENST00000357732 PTPN22Q9Y2R2 807 aa18.94■□□□□ 0.62
RTN4-204ENST00000357732 ARL2BPQ9Y2Y0 163 aa18.94■□□□□ 0.62
RTN4-204ENST00000357732 COL11A2P13942 1736 aaPredicted RBP18.94■□□□□ 0.62
RTN4-204ENST00000357732 TMEM120BA0PK00 339 aa18.93■□□□□ 0.62
RTN4-204ENST00000357732 ANKRD63C9JTQ0 380 aa18.93■□□□□ 0.62
RTN4-204ENST00000357732 ARP10275 920 aa18.93■□□□□ 0.62
RTN4-204ENST00000357732 CYP11B1P15538 503 aa18.93■□□□□ 0.62
RTN4-204ENST00000357732 GTF2H1P32780 548 aa18.93■□□□□ 0.62
RTN4-204ENST00000357732 SKIV2L2P42285 1042 aaKnown RBP18.93■□□□□ 0.62
RTN4-204ENST00000357732 ECE1P42892 770 aa18.93■□□□□ 0.62
RTN4-204ENST00000357732 KRT39Q6A163 491 aa18.93■□□□□ 0.62
RTN4-204ENST00000357732 ACAD10Q6JQN1 1059 aa18.93■□□□□ 0.62
RTN4-204ENST00000357732 ZNF746Q6NUN9 644 aaPredicted RBP18.93■□□□□ 0.62
RTN4-204ENST00000357732 ENOSF1Q7L5Y1 443 aa18.93■□□□□ 0.62
RTN4-204ENST00000357732 FAM160B2Q86V87 743 aa18.93■□□□□ 0.62
RTN4-204ENST00000357732 CKAP2Q8WWK9 683 aa18.93■□□□□ 0.62
RTN4-204ENST00000357732 TRIM11Q96F44 468 aa18.93■□□□□ 0.62
RTN4-204ENST00000357732 KREMEN1Q96MU8 473 aa18.93■□□□□ 0.62
RTN4-204ENST00000357732 TRAIPQ9BWF2 469 aa18.93■□□□□ 0.62
RTN4-204ENST00000357732 CCDC113Q9H0I3 377 aa18.93■□□□□ 0.62
RTN4-204ENST00000357732 AVENQ9NQS1 362 aaPredicted RBP18.93■□□□□ 0.62
RTN4-204ENST00000357732 AAASQ9NRG9 546 aa18.93■□□□□ 0.62
RTN4-204ENST00000357732 DONSONQ9NYP3 566 aa18.93■□□□□ 0.62
RTN4-204ENST00000357732 TCRBV7S2A1N4TA0A589 114 aa18.93■□□□□ 0.62
RTN4-204ENST00000357732 FAM170AA1A519 330 aa18.93■□□□□ 0.62
RTN4-204ENST00000357732 TP73O15350 636 aa18.93■□□□□ 0.62
RTN4-204ENST00000357732 MYBL1P10243 752 aa18.93■□□□□ 0.62
RTN4-204ENST00000357732 CENPCQ03188 943 aa18.93■□□□□ 0.62
RTN4-204ENST00000357732 PTP4A2Q12974 167 aa18.93■□□□□ 0.62
RTN4-204ENST00000357732 MIER3Q7Z3K6 550 aa18.93■□□□□ 0.62
RTN4-204ENST00000357732 CBWD1Q9BRT8 395 aa18.93■□□□□ 0.62
RTN4-204ENST00000357732 FOXP3Q9BZS1 431 aa18.93■□□□□ 0.62
RTN4-204ENST00000357732 PCIF1Q9H4Z3 704 aa18.93■□□□□ 0.62
RTN4-204ENST00000357732 TRPC5Q9UL62 973 aaPredicted RBP18.93■□□□□ 0.62
RTN4-204ENST00000357732 SBDSQ9Y3A5 250 aaKnown RBP eCLIP18.93■□□□□ 0.62
RTN4-204ENST00000357732 ADGRA3Q8IWK6 1321 aa18.93■□□□□ 0.62
RTN4-204ENST00000357732 CYP26A1O43174 497 aa18.92■□□□□ 0.62
RTN4-204ENST00000357732 SORBS3O60504 671 aa18.92■□□□□ 0.62
RTN4-204ENST00000357732 MMP10P09238 476 aa18.92■□□□□ 0.62
RTN4-204ENST00000357732 NQO1P15559 274 aaKnown RBP18.92■□□□□ 0.62
RTN4-204ENST00000357732 IFNAR2P48551 515 aa18.92■□□□□ 0.62
RTN4-204ENST00000357732 BNIP1Q12981 228 aa18.92■□□□□ 0.62
RTN4-204ENST00000357732 TLDC1Q6P9B6 456 aa18.92■□□□□ 0.62
RTN4-204ENST00000357732 PPM1KQ8N3J5 372 aa18.92■□□□□ 0.62
Retrieved 100 of 20,778 RNA–protein pairs in 18.3 ms