RNA–Protein interactions for RNA: ENST00000357457.8

COL4A3BP-202, Transcript of collagen type IV alpha 3 binding protein, humanhuman

TSL 5

Gene COL4A3BP, Length 886 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL4A3BP-202ENST00000357457 SPATA31D3P0C874 917 aa9.55□□□□□ -0.88
COL4A3BP-202ENST00000357457 ARL2P36404 184 aa9.55□□□□□ -0.88
COL4A3BP-202ENST00000357457 MLH1P40692 756 aa9.55□□□□□ -0.88
COL4A3BP-202ENST00000357457 SCNN1GP51170 649 aa9.55□□□□□ -0.88
COL4A3BP-202ENST00000357457 STARD6P59095 220 aa9.55□□□□□ -0.88
COL4A3BP-202ENST00000357457 NCBP1Q09161 790 aaKnown RBP9.55□□□□□ -0.88
COL4A3BP-202ENST00000357457 HTR4Q13639 388 aa9.55□□□□□ -0.88
COL4A3BP-202ENST00000357457 USP41Q3LFD5 358 aa9.55□□□□□ -0.88
COL4A3BP-202ENST00000357457 FUT10Q6P4F1 479 aa9.55□□□□□ -0.88
COL4A3BP-202ENST00000357457 SPATA31D4Q6ZUB0 917 aa9.55□□□□□ -0.88
COL4A3BP-202ENST00000357457 NEK8Q86SG6 692 aa9.55□□□□□ -0.88
COL4A3BP-202ENST00000357457 PALB2Q86YC2 1186 aa9.55□□□□□ -0.88
COL4A3BP-202ENST00000357457 C1orf210Q8IVY1 113 aa9.55□□□□□ -0.88
COL4A3BP-202ENST00000357457 GPR152Q8TDT2 470 aa9.55□□□□□ -0.88
COL4A3BP-202ENST00000357457 RMDN1Q96DB5 314 aa9.55□□□□□ -0.88
COL4A3BP-202ENST00000357457 BORCS6Q96GS4 357 aa9.55□□□□□ -0.88
COL4A3BP-202ENST00000357457 ZFP42Q96MM3 310 aa9.55□□□□□ -0.88
COL4A3BP-202ENST00000357457 AIFM3Q96NN9 605 aa9.55□□□□□ -0.88
COL4A3BP-202ENST00000357457 MTRQ99707 1265 aa9.55□□□□□ -0.88
COL4A3BP-202ENST00000357457 PHF20Q9BVI0 1012 aa9.55□□□□□ -0.88
COL4A3BP-202ENST00000357457 SLKQ9H2G2 1235 aaPredicted RBP9.55□□□□□ -0.88
COL4A3BP-202ENST00000357457 ZSWIM4Q9H7M6 989 aa9.55□□□□□ -0.88
COL4A3BP-202ENST00000357457 CA14Q9ULX7 337 aa9.55□□□□□ -0.88
COL4A3BP-202ENST00000357457 SIT1Q9Y3P8 196 aa9.55□□□□□ -0.88
COL4A3BP-202ENST00000357457 HES2Q9Y543 173 aa9.55□□□□□ -0.88
COL4A3BP-202ENST00000357457 ZFP37Q9Y6Q3 630 aaPredicted RBP9.55□□□□□ -0.88
COL4A3BP-202ENST00000357457 NCOR2Q9Y618 2525 aa9.55□□□□□ -0.88
COL4A3BP-202ENST00000357457 CACNA1BQ00975 2339 aa9.55□□□□□ -0.88
COL4A3BP-202ENST00000357457 TRIP11Q15643 1979 aa9.54□□□□□ -0.88
COL4A3BP-202ENST00000357457 A0A1B0GUA9 196 aa9.54□□□□□ -0.88
COL4A3BP-202ENST00000357457 CPLX1O14810 134 aa9.54□□□□□ -0.88
COL4A3BP-202ENST00000357457 ZMYND10O75800 440 aa9.54□□□□□ -0.88
COL4A3BP-202ENST00000357457 ERLIN2O94905 339 aa9.54□□□□□ -0.88
COL4A3BP-202ENST00000357457 DCNP07585 359 aaKnown RBP9.54□□□□□ -0.88
COL4A3BP-202ENST00000357457 SP9P0CG40 484 aa9.54□□□□□ -0.88
COL4A3BP-202ENST00000357457 GLULP15104 373 aa9.54□□□□□ -0.88
COL4A3BP-202ENST00000357457 ARF4P18085 180 aaPredicted RBP9.54□□□□□ -0.88
COL4A3BP-202ENST00000357457 MBTD1Q05BQ5 628 aa9.54□□□□□ -0.88
COL4A3BP-202ENST00000357457 XKR9Q5GH70 373 aa9.54□□□□□ -0.88
COL4A3BP-202ENST00000357457 DCLRE1AQ6PJP8 1040 aa9.54□□□□□ -0.88
COL4A3BP-202ENST00000357457 MAML2Q8IZL2 1156 aaPredicted RBP9.54□□□□□ -0.88
COL4A3BP-202ENST00000357457 KCNG4Q8TDN1 519 aa9.54□□□□□ -0.88
COL4A3BP-202ENST00000357457 DYDC2Q96IM9 177 aa9.54□□□□□ -0.88
COL4A3BP-202ENST00000357457 CPB2Q96IY4 423 aa9.54□□□□□ -0.88
COL4A3BP-202ENST00000357457 NAP1L4Q99733 375 aaKnown RBP9.54□□□□□ -0.88
COL4A3BP-202ENST00000357457 HSD17B14Q9BPX1 270 aa9.54□□□□□ -0.88
COL4A3BP-202ENST00000357457 DDX23Q9BUQ8 820 aaKnown RBP9.54□□□□□ -0.88
COL4A3BP-202ENST00000357457 TM6SF1Q9BZW5 370 aa9.54□□□□□ -0.88
COL4A3BP-202ENST00000357457 PIDD1Q9HB75 910 aa9.54□□□□□ -0.88
COL4A3BP-202ENST00000357457 ARHGEF3Q9NR81 526 aa9.54□□□□□ -0.88
COL4A3BP-202ENST00000357457 ADAM28Q9UKQ2 775 aa9.54□□□□□ -0.88
COL4A3BP-202ENST00000357457 KCNJ14Q9UNX9 436 aa9.54□□□□□ -0.88
COL4A3BP-202ENST00000357457 R4GN57 208 aa9.54□□□□□ -0.88
COL4A3BP-202ENST00000357457 VWA8A3KMH1 1905 aa9.53□□□□□ -0.88
COL4A3BP-202ENST00000357457 CCDC194A0A1B0GVG4 234 aa9.53□□□□□ -0.88
COL4A3BP-202ENST00000357457 INO80B-WBP1J3KQ70 363 aa9.53□□□□□ -0.88
COL4A3BP-202ENST00000357457 CCNT1O60563 726 aaKnown RBP9.53□□□□□ -0.88
COL4A3BP-202ENST00000357457 DGAT1O75907 488 aa9.53□□□□□ -0.88
COL4A3BP-202ENST00000357457 REC8O95072 547 aa9.53□□□□□ -0.88
COL4A3BP-202ENST00000357457 MYBP10242 640 aa9.53□□□□□ -0.88
COL4A3BP-202ENST00000357457 XRCC6P12956 609 aaKnown RBP eCLIP9.53□□□□□ -0.88
COL4A3BP-202ENST00000357457 CREMQ03060 361 aa9.53□□□□□ -0.88
COL4A3BP-202ENST00000357457 GRIK3Q13003 919 aa9.53□□□□□ -0.88
COL4A3BP-202ENST00000357457 TFDP1Q14186 410 aa9.53□□□□□ -0.88
COL4A3BP-202ENST00000357457 CTTNQ14247 550 aaKnown RBP9.53□□□□□ -0.88
COL4A3BP-202ENST00000357457 PPP1R15BQ5SWA1 713 aa9.53□□□□□ -0.88
COL4A3BP-202ENST00000357457 ZC3H14Q6PJT7 736 aaKnown RBP9.53□□□□□ -0.88
COL4A3BP-202ENST00000357457 CPLX2Q6PUV4 134 aaKnown RBP9.53□□□□□ -0.88
COL4A3BP-202ENST00000357457 SLFN12Q8IYM2 578 aa9.53□□□□□ -0.88
COL4A3BP-202ENST00000357457 HACE1Q8IYU2 909 aa9.53□□□□□ -0.88
COL4A3BP-202ENST00000357457 SUMF1Q8NBK3 374 aa9.53□□□□□ -0.88
COL4A3BP-202ENST00000357457 PJA1Q8NG27 643 aa9.53□□□□□ -0.88
COL4A3BP-202ENST00000357457 ASAP3Q8TDY4 903 aa9.53□□□□□ -0.88
COL4A3BP-202ENST00000357457 RIN2Q8WYP3 895 aaPredicted RBP9.53□□□□□ -0.88
COL4A3BP-202ENST00000357457 SHDQ96IW2 340 aa9.53□□□□□ -0.88
COL4A3BP-202ENST00000357457 B3GALT6Q96L58 329 aa9.53□□□□□ -0.88
COL4A3BP-202ENST00000357457 CLSTN3Q9BQT9 956 aa9.53□□□□□ -0.88
COL4A3BP-202ENST00000357457 RPP25Q9BUL9 199 aaKnown RBP9.53□□□□□ -0.88
COL4A3BP-202ENST00000357457 OSBPL6Q9BZF3 934 aa9.53□□□□□ -0.88
COL4A3BP-202ENST00000357457 NXF3Q9H4D5 531 aaKnown RBP9.53□□□□□ -0.88
COL4A3BP-202ENST00000357457 ANKEF1Q9NU02 776 aa9.53□□□□□ -0.88
COL4A3BP-202ENST00000357457 DLL3Q9NYJ7 618 aa9.53□□□□□ -0.88
COL4A3BP-202ENST00000357457 CDH7Q9ULB5 785 aa9.53□□□□□ -0.88
COL4A3BP-202ENST00000357457 CYP46A1Q9Y6A2 500 aa9.53□□□□□ -0.88
COL4A3BP-202ENST00000357457 NUMBLQ9Y6R0 609 aa9.53□□□□□ -0.88
COL4A3BP-202ENST00000357457 KANSL1LA0AUZ9 987 aa9.52□□□□□ -0.89
COL4A3BP-202ENST00000357457 TADA2AO75478 443 aa9.52□□□□□ -0.89
COL4A3BP-202ENST00000357457 BAG4O95429 457 aaKnown RBP9.52□□□□□ -0.89
COL4A3BP-202ENST00000357457 POU2F2P09086 479 aa9.52□□□□□ -0.89
COL4A3BP-202ENST00000357457 HNRNPA1P09651 372 aaKnown RBP eCLIP9.52□□□□□ -0.89
COL4A3BP-202ENST00000357457 RPL17P18621 184 aaKnown RBP9.52□□□□□ -0.89
COL4A3BP-202ENST00000357457 RFX1P22670 979 aa9.52□□□□□ -0.89
COL4A3BP-202ENST00000357457 GLRA2P23416 452 aa9.52□□□□□ -0.89
COL4A3BP-202ENST00000357457 FSHRP23945 695 aa9.52□□□□□ -0.89
COL4A3BP-202ENST00000357457 AKAP5P24588 427 aa9.52□□□□□ -0.89
COL4A3BP-202ENST00000357457 HOXA9P31269 272 aa9.52□□□□□ -0.89
COL4A3BP-202ENST00000357457 GPC5P78333 572 aa9.52□□□□□ -0.89
COL4A3BP-202ENST00000357457 CYP4A11Q02928 519 aa9.52□□□□□ -0.89
COL4A3BP-202ENST00000357457 CAPSQ13938 189 aa9.52□□□□□ -0.89
COL4A3BP-202ENST00000357457 PUM1Q14671 1186 aaKnown RBP eCLIP9.52□□□□□ -0.893e-6■□□□□ 10.7
Retrieved 100 of 20,778 RNA–protein pairs in 44.2 ms