RNA–Protein interactions for RNA: ENST00000357412.2

LINC01560-201, Transcript of long intergenic non-protein coding RNA 1560, humanhuman

BASIC

Gene LINC01560, Length 1,253 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC01560-201ENST00000357412 EDN1P05305 212 aa11.3□□□□□ -0.6
LINC01560-201ENST00000357412 NPR3P17342 541 aa11.3□□□□□ -0.6
LINC01560-201ENST00000357412 RPL17P18621 184 aaKnown RBP11.3□□□□□ -0.6
LINC01560-201ENST00000357412 NAMPTP43490 491 aa11.3□□□□□ -0.6
LINC01560-201ENST00000357412 CLCN5P51795 746 aa11.3□□□□□ -0.6
LINC01560-201ENST00000357412 TUSC3Q13454 348 aa11.3□□□□□ -0.6
LINC01560-201ENST00000357412 PRPF4BQ13523 1007 aaKnown RBP11.3□□□□□ -0.6
LINC01560-201ENST00000357412 HSP90AA2PQ14568 343 aaPredicted RBP11.3□□□□□ -0.6
LINC01560-201ENST00000357412 NAB2Q15742 525 aa11.3□□□□□ -0.6
LINC01560-201ENST00000357412 EEF1DP3Q658K8 133 aa11.3□□□□□ -0.6
LINC01560-201ENST00000357412 ZBTB8OSQ8IWT0 167 aa11.3□□□□□ -0.6
LINC01560-201ENST00000357412 C4orf32Q8N8J7 132 aa11.3□□□□□ -0.6
LINC01560-201ENST00000357412 FBXO18Q8NFZ0 1043 aa11.3□□□□□ -0.6
LINC01560-201ENST00000357412 ERMNQ8TAM6 284 aa11.3□□□□□ -0.6
LINC01560-201ENST00000357412 RIN2Q8WYP3 895 aaPredicted RBP11.3□□□□□ -0.6
LINC01560-201ENST00000357412 SMG7Q92540 1137 aaKnown RBP11.3□□□□□ -0.6
LINC01560-201ENST00000357412 MYADMQ96S97 322 aa11.3□□□□□ -0.6
LINC01560-201ENST00000357412 KIFC3Q9BVG8 833 aa11.3□□□□□ -0.6
LINC01560-201ENST00000357412 NT5C3AQ9H0P0 336 aa11.3□□□□□ -0.6
LINC01560-201ENST00000357412 C2orf40Q9H1Z8 148 aa11.3□□□□□ -0.6
LINC01560-201ENST00000357412 PLEKHA4Q9H4M7 779 aa11.3□□□□□ -0.6
LINC01560-201ENST00000357412 ZDHHC7Q9NXF8 308 aa11.3□□□□□ -0.6
LINC01560-201ENST00000357412 SNTG2Q9NY99 539 aa11.3□□□□□ -0.6
LINC01560-201ENST00000357412 IGSF9Q9P2J2 1179 aa11.3□□□□□ -0.6
LINC01560-201ENST00000357412 EPS15L1Q9UBC2 864 aa11.3□□□□□ -0.6
LINC01560-201ENST00000357412 ZFHX2Q9C0A1 2572 aaPredicted RBP11.3□□□□□ -0.6
LINC01560-201ENST00000357412 CLUHO75153 1309 aa11.3□□□□□ -0.6
LINC01560-201ENST00000357412 CASTOR2A6NHX0 329 aa11.29□□□□□ -0.6
LINC01560-201ENST00000357412 N4BP3O15049 544 aa11.29□□□□□ -0.6
LINC01560-201ENST00000357412 PI15O43692 258 aa11.29□□□□□ -0.6
LINC01560-201ENST00000357412 NARSO43776 548 aaKnown RBP11.29□□□□□ -0.6
LINC01560-201ENST00000357412 RECQL4O94761 1208 aa11.29□□□□□ -0.6
LINC01560-201ENST00000357412 KIF4AO95239 1232 aa11.29□□□□□ -0.6
LINC01560-201ENST00000357412 PRKCBP05771 671 aa11.29□□□□□ -0.6
LINC01560-201ENST00000357412 MUTP22033 750 aa11.29□□□□□ -0.6
LINC01560-201ENST00000357412 TRAPPC10P48553 1259 aa11.29□□□□□ -0.6
LINC01560-201ENST00000357412 RBM25P49756 843 aaKnown RBP11.29□□□□□ -0.6
LINC01560-201ENST00000357412 FXR2P51116 673 aaKnown RBP eCLIP11.29□□□□□ -0.6
LINC01560-201ENST00000357412 NBR1Q14596 966 aa11.29□□□□□ -0.6
LINC01560-201ENST00000357412 MAPK6Q16659 721 aa11.29□□□□□ -0.6
LINC01560-201ENST00000357412 TTC38Q5R3I4 469 aa11.29□□□□□ -0.6
LINC01560-201ENST00000357412 ELMSAN1Q6PJG2 1045 aa11.29□□□□□ -0.6
LINC01560-201ENST00000357412 PRSS55Q6UWB4 352 aaPredicted RBP11.29□□□□□ -0.6
LINC01560-201ENST00000357412 NOSTRINQ8IVI9 506 aa11.29□□□□□ -0.6
LINC01560-201ENST00000357412 DEPTORQ8TB45 409 aa11.29□□□□□ -0.6
LINC01560-201ENST00000357412 LNX1Q8TBB1 728 aaPredicted RBP11.29□□□□□ -0.6
LINC01560-201ENST00000357412 HASPINQ8TF76 798 aa11.29□□□□□ -0.6
LINC01560-201ENST00000357412 RSAD2Q8WXG1 361 aa11.29□□□□□ -0.6
LINC01560-201ENST00000357412 STAMQ92783 540 aa11.29□□□□□ -0.6
LINC01560-201ENST00000357412 PRKD2Q9BZL6 878 aa11.29□□□□□ -0.6
LINC01560-201ENST00000357412 MFSD1Q9H3U5 465 aa11.29□□□□□ -0.6
LINC01560-201ENST00000357412 POLD4Q9HCU8 107 aa11.29□□□□□ -0.6
LINC01560-201ENST00000357412 PLXNA4Q9HCM2 1894 aa11.29□□□□□ -0.6
LINC01560-201ENST00000357412 SF3B1O75533 1304 aaKnown RBP eCLIP11.29□□□□□ -0.6
LINC01560-201ENST00000357412 KIAA1671Q9BY89 1806 aa11.28□□□□□ -0.6
LINC01560-201ENST00000357412 PROB1E7EW31 1015 aa11.28□□□□□ -0.6
LINC01560-201ENST00000357412 ST18O60284 1047 aa11.28□□□□□ -0.6
LINC01560-201ENST00000357412 GFRA3O60609 400 aa11.28□□□□□ -0.6
LINC01560-201ENST00000357412 ZMYND10O75800 440 aa11.28□□□□□ -0.6
LINC01560-201ENST00000357412 THP07101 528 aa11.28□□□□□ -0.6
LINC01560-201ENST00000357412 LIG1P18858 919 aa11.28□□□□□ -0.6
LINC01560-201ENST00000357412 AOC1P19801 751 aa11.28□□□□□ -0.6
LINC01560-201ENST00000357412 IGFBP6P24592 240 aaPredicted RBP11.28□□□□□ -0.6
LINC01560-201ENST00000357412 GBP2P32456 591 aaPredicted RBP11.28□□□□□ -0.6
LINC01560-201ENST00000357412 HMGN5P82970 282 aaKnown RBP11.28□□□□□ -0.6
LINC01560-201ENST00000357412 CREMQ03060 361 aa11.28□□□□□ -0.6
LINC01560-201ENST00000357412 NT5DC1Q5TFE4 455 aa11.28□□□□□ -0.6
LINC01560-201ENST00000357412 HAUS3Q68CZ6 603 aa11.28□□□□□ -0.6
LINC01560-201ENST00000357412 GLYCTKQ8IVS8 523 aa11.28□□□□□ -0.6
LINC01560-201ENST00000357412 SLC44A3Q8N4M1 653 aa11.28□□□□□ -0.6
LINC01560-201ENST00000357412 FLCNQ8NFG4 579 aa11.28□□□□□ -0.6
LINC01560-201ENST00000357412 PIK3R5Q8WYR1 880 aa11.28□□□□□ -0.6
LINC01560-201ENST00000357412 KIF2CQ99661 725 aa11.28□□□□□ -0.6
LINC01560-201ENST00000357412 CLSTN3Q9BQT9 956 aa11.28□□□□□ -0.6
LINC01560-201ENST00000357412 TTPALQ9BTX7 342 aa11.28□□□□□ -0.6
LINC01560-201ENST00000357412 BHMT2Q9H2M3 363 aa11.28□□□□□ -0.6
LINC01560-201ENST00000357412 EVPLQ92817 2033 aa11.27□□□□□ -0.61
LINC01560-201ENST00000357412 ADAM12O43184 909 aa11.27□□□□□ -0.61
LINC01560-201ENST00000357412 LAMP2P13473 410 aa11.27□□□□□ -0.61
LINC01560-201ENST00000357412 U2AF2P26368 475 aaKnown RBP eCLIP11.27□□□□□ -0.61
LINC01560-201ENST00000357412 CCT6AP40227 531 aaKnown RBP11.27□□□□□ -0.61
LINC01560-201ENST00000357412 NBL1P41271 181 aa11.27□□□□□ -0.61
LINC01560-201ENST00000357412 TOB1P50616 345 aaPredicted RBP11.27□□□□□ -0.61
LINC01560-201ENST00000357412 PPP2R5AQ15172 486 aa11.27□□□□□ -0.61
LINC01560-201ENST00000357412 TMEM132AQ24JP5 1023 aa11.27□□□□□ -0.61
LINC01560-201ENST00000357412 FAM171A1Q5VUB5 890 aa11.27□□□□□ -0.61
LINC01560-201ENST00000357412 CD300LGQ6UXG3 332 aa11.27□□□□□ -0.61
LINC01560-201ENST00000357412 SIX5Q8N196 739 aa11.27□□□□□ -0.61
LINC01560-201ENST00000357412 KIFAP3Q92845 792 aa11.27□□□□□ -0.61
LINC01560-201ENST00000357412 NXPE3Q969Y0 559 aa11.27□□□□□ -0.61
LINC01560-201ENST00000357412 ADPGKQ9BRR6 497 aa11.27□□□□□ -0.61
LINC01560-201ENST00000357412 PIDD1Q9HB75 910 aa11.27□□□□□ -0.61
LINC01560-201ENST00000357412 FAM120AQ9NZB2 1118 aaKnown RBP eCLIP11.27□□□□□ -0.61
LINC01560-201ENST00000357412 WNT16Q9UBV4 365 aa11.27□□□□□ -0.61
LINC01560-201ENST00000357412 FBXW11Q9UKB1 542 aa11.27□□□□□ -0.61
LINC01560-201ENST00000357412 FBXL21Q9UKT6 434 aa11.27□□□□□ -0.61
LINC01560-201ENST00000357412 KIAA1024Q9UPX6 916 aa11.27□□□□□ -0.61
LINC01560-201ENST00000357412 PTPRZ1P23471 2315 aaPredicted RBP11.26□□□□□ -0.61
LINC01560-201ENST00000357412 KRBA1A5PL33 1030 aa11.26□□□□□ -0.61
LINC01560-201ENST00000357412 ANHXE9PGG2 379 aa11.26□□□□□ -0.61
Retrieved 100 of 20,778 RNA–protein pairs in 38 ms