RNA–Protein interactions for RNA: ENST00000356316.7

CAPN3-204, Transcript of calpain 3, humanhuman

TSL 5 BASIC

Gene CAPN3, Length 1,291 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CAPN3-204ENST00000356316 PDIA5Q14554 519 aa11.77□□□□□ -0.53
CAPN3-204ENST00000356316 FAM187BQ17R55 369 aa11.77□□□□□ -0.53
CAPN3-204ENST00000356316 POTEGQ6S5H5 508 aa11.77□□□□□ -0.53
CAPN3-204ENST00000356316 PALB2Q86YC2 1186 aa11.77□□□□□ -0.53
CAPN3-204ENST00000356316 NOSTRINQ8IVI9 506 aa11.77□□□□□ -0.53
CAPN3-204ENST00000356316 HDAC7Q8WUI4 952 aa11.77□□□□□ -0.53
CAPN3-204ENST00000356316 FZD8Q9H461 694 aa11.77□□□□□ -0.53
CAPN3-204ENST00000356316 PLEKHA4Q9H4M7 779 aa11.77□□□□□ -0.53
CAPN3-204ENST00000356316 RXFP1Q9HBX9 757 aa11.77□□□□□ -0.53
CAPN3-204ENST00000356316 LRWD1Q9UFC0 647 aa11.77□□□□□ -0.53
CAPN3-204ENST00000356316 ADAM28Q9UKQ2 775 aa11.77□□□□□ -0.53
CAPN3-204ENST00000356316 KIF3AQ9Y496 699 aa11.77□□□□□ -0.53
CAPN3-204ENST00000356316 ZMYM2Q9UBW7 1377 aa11.77□□□□□ -0.53
CAPN3-204ENST00000356316 MUC6Q6W4X9 2439 aa11.76□□□□□ -0.53
CAPN3-204ENST00000356316 ACKR2O00590 384 aa11.76□□□□□ -0.53
CAPN3-204ENST00000356316 C1RP00736 705 aa11.76□□□□□ -0.53
CAPN3-204ENST00000356316 PRKCBP05771 671 aa11.76□□□□□ -0.53
CAPN3-204ENST00000356316 THP07101 528 aa11.76□□□□□ -0.53
CAPN3-204ENST00000356316 SPATA31D3P0C874 917 aa11.76□□□□□ -0.53
CAPN3-204ENST00000356316 MYBP10242 640 aa11.76□□□□□ -0.53
CAPN3-204ENST00000356316 GBP2P32456 591 aaPredicted RBP11.76□□□□□ -0.53
CAPN3-204ENST00000356316 NAMPTP43490 491 aa11.76□□□□□ -0.53
CAPN3-204ENST00000356316 TUSC3Q13454 348 aa11.76□□□□□ -0.53
CAPN3-204ENST00000356316 TDGQ13569 410 aa11.76□□□□□ -0.53
CAPN3-204ENST00000356316 HSP90AA2PQ14568 343 aaPredicted RBP11.76□□□□□ -0.53
CAPN3-204ENST00000356316 CDCA2Q69YH5 1023 aaPredicted RBP11.76□□□□□ -0.53
CAPN3-204ENST00000356316 FUT10Q6P4F1 479 aa11.76□□□□□ -0.53
CAPN3-204ENST00000356316 SPATA31D4Q6ZUB0 917 aa11.76□□□□□ -0.53
CAPN3-204ENST00000356316 GPR65Q8IYL9 337 aa11.76□□□□□ -0.53
CAPN3-204ENST00000356316 PRSS33Q8NF86 280 aa11.76□□□□□ -0.53
CAPN3-204ENST00000356316 CMASQ8NFW8 434 aaPredicted RBP11.76□□□□□ -0.53
CAPN3-204ENST00000356316 RIN2Q8WYP3 895 aaPredicted RBP11.76□□□□□ -0.53
CAPN3-204ENST00000356316 RABGGTAQ92696 567 aa11.76□□□□□ -0.53
CAPN3-204ENST00000356316 KIFAP3Q92845 792 aa11.76□□□□□ -0.53
CAPN3-204ENST00000356316 CHST7Q9NS84 486 aa11.76□□□□□ -0.53
CAPN3-204ENST00000356316 SNTG2Q9NY99 539 aa11.76□□□□□ -0.53
CAPN3-204ENST00000356316 KIAA1024Q9UPX6 916 aa11.76□□□□□ -0.53
CAPN3-204ENST00000356316 DNM3Q9UQ16 869 aa11.76□□□□□ -0.53
CAPN3-204ENST00000356316 SF3B1O75533 1304 aaKnown RBP eCLIP11.76□□□□□ -0.53
CAPN3-204ENST00000356316 K7ERI5 159 aa11.75□□□□□ -0.53
CAPN3-204ENST00000356316 CENPBP07199 599 aaPredicted RBP11.75□□□□□ -0.53
CAPN3-204ENST00000356316 TIE1P35590 1138 aa11.75□□□□□ -0.53
CAPN3-204ENST00000356316 VCPP55072 806 aaKnown RBP11.75□□□□□ -0.53
CAPN3-204ENST00000356316 ST3GAL1Q11201 340 aa11.75□□□□□ -0.53
CAPN3-204ENST00000356316 ELAVL2Q12926 359 aaKnown RBP11.75□□□□□ -0.53
CAPN3-204ENST00000356316 PDXDC1Q6P996 788 aa11.75□□□□□ -0.53
CAPN3-204ENST00000356316 CEP57Q86XR8 500 aa11.75□□□□□ -0.53
CAPN3-204ENST00000356316 GLYCTKQ8IVS8 523 aa11.75□□□□□ -0.53
CAPN3-204ENST00000356316 RNF168Q8IYW5 571 aaPredicted RBP11.75□□□□□ -0.53
CAPN3-204ENST00000356316 GSTCDQ8NEC7 633 aa11.75□□□□□ -0.53
CAPN3-204ENST00000356316 SMG7Q92540 1137 aaKnown RBP11.75□□□□□ -0.53
CAPN3-204ENST00000356316 ATOH1Q92858 354 aaPredicted RBP11.75□□□□□ -0.53
CAPN3-204ENST00000356316 B3GALT6Q96L58 329 aa11.75□□□□□ -0.53
CAPN3-204ENST00000356316 GPR62Q9BZJ7 368 aa11.75□□□□□ -0.53
CAPN3-204ENST00000356316 BHMT2Q9H2M3 363 aa11.75□□□□□ -0.53
CAPN3-204ENST00000356316 PDZD7Q9H5P4 517 aa11.75□□□□□ -0.53
CAPN3-204ENST00000356316 DDX19AQ9NUU7 478 aaKnown RBP11.75□□□□□ -0.53
CAPN3-204ENST00000356316 FNIP2Q9P278 1114 aa11.75□□□□□ -0.53
CAPN3-204ENST00000356316 IGSF9Q9P2J2 1179 aa11.75□□□□□ -0.53
CAPN3-204ENST00000356316 MTCL1Q9Y4B5 1905 aaKnown RBP11.74□□□□□ -0.53
CAPN3-204ENST00000356316 F8W810 466 aa11.74□□□□□ -0.53
CAPN3-204ENST00000356316 STK25O00506 426 aa11.74□□□□□ -0.53
CAPN3-204ENST00000356316 LAD1O00515 517 aa11.74□□□□□ -0.53
CAPN3-204ENST00000356316 TGM5O43548 720 aa11.74□□□□□ -0.53
CAPN3-204ENST00000356316 EFEMP2O95967 443 aa11.74□□□□□ -0.53
CAPN3-204ENST00000356316 PDGFBP01127 241 aaPredicted RBP11.74□□□□□ -0.53
CAPN3-204ENST00000356316 U2AF2P26368 475 aaKnown RBP eCLIP11.74□□□□□ -0.53
CAPN3-204ENST00000356316 PTGDRQ13258 359 aa11.74□□□□□ -0.53
CAPN3-204ENST00000356316 DCAF4L1Q3SXM0 396 aa11.74□□□□□ -0.53
CAPN3-204ENST00000356316 FAM171A1Q5VUB5 890 aa11.74□□□□□ -0.53
CAPN3-204ENST00000356316 KRT79Q5XKE5 535 aa11.74□□□□□ -0.53
CAPN3-204ENST00000356316 MCTP1Q6DN14 999 aa11.74□□□□□ -0.53
CAPN3-204ENST00000356316 DTHD1Q6ZMT9 781 aa11.74□□□□□ -0.53
CAPN3-204ENST00000356316 SNX29Q8TEQ0 813 aa11.74□□□□□ -0.53
CAPN3-204ENST00000356316 BSNDQ8WZ55 320 aa11.74□□□□□ -0.53
CAPN3-204ENST00000356316 TTPALQ9BTX7 342 aa11.74□□□□□ -0.53
CAPN3-204ENST00000356316 SMOC2Q9H3U7 446 aa11.74□□□□□ -0.53
CAPN3-204ENST00000356316 KCNK12Q9HB15 430 aa11.74□□□□□ -0.53
CAPN3-204ENST00000356316 WDR6Q9NNW5 1121 aaKnown RBP11.74□□□□□ -0.53
CAPN3-204ENST00000356316 ZDHHC7Q9NXF8 308 aa11.74□□□□□ -0.53
CAPN3-204ENST00000356316 FBXL21Q9UKT6 434 aa11.74□□□□□ -0.53
CAPN3-204ENST00000356316 PCDHB8Q9UN66 801 aa11.74□□□□□ -0.53
CAPN3-204ENST00000356316 GDAQ9Y2T3 454 aa11.74□□□□□ -0.53
CAPN3-204ENST00000356316 PLXNA3P51805 1871 aa11.74□□□□□ -0.53
CAPN3-204ENST00000356316 KMT2EQ8IZD2 1858 aa11.74□□□□□ -0.53
CAPN3-204ENST00000356316 C2orf16Q68DN1 1984 aa11.74□□□□□ -0.53
CAPN3-204ENST00000356316 CASTOR2A6NHX0 329 aa11.73□□□□□ -0.53
CAPN3-204ENST00000356316 CCDC169A6NNP5 214 aa11.73□□□□□ -0.53
CAPN3-204ENST00000356316 ST18O60284 1047 aa11.73□□□□□ -0.53
CAPN3-204ENST00000356316 RFPL2O75678 378 aa11.73□□□□□ -0.53
CAPN3-204ENST00000356316 RECQL4O94761 1208 aa11.73□□□□□ -0.53
CAPN3-204ENST00000356316 CLCN5P51795 746 aa11.73□□□□□ -0.53
CAPN3-204ENST00000356316 YARSP54577 528 aaKnown RBP11.73□□□□□ -0.53
CAPN3-204ENST00000356316 TCF15Q12870 199 aa11.73□□□□□ -0.53
CAPN3-204ENST00000356316 ATF7IP2Q5U623 682 aa11.73□□□□□ -0.53
CAPN3-204ENST00000356316 ZNF318Q5VUA4 2279 aa11.73□□□□□ -0.53
CAPN3-204ENST00000356316 ASTLQ6HA08 431 aaPredicted RBP11.73□□□□□ -0.53
CAPN3-204ENST00000356316 C4orf32Q8N8J7 132 aa11.73□□□□□ -0.53
CAPN3-204ENST00000356316 FLCNQ8NFG4 579 aa11.73□□□□□ -0.53
CAPN3-204ENST00000356316 HASPINQ8TF76 798 aa11.73□□□□□ -0.53
Retrieved 100 of 20,778 RNA–protein pairs in 15.3 ms