RNA–Protein interactions for RNA: ENST00000355311.9

EBF3-201, Transcript of early B cell factor 3, humanhuman

APPRIS ALT1 TSL 5 BASIC

Gene EBF3, Length 2,993 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
EBF3-201ENST00000355311 AGO4Q9HCK5 861 aaKnown RBP14.8□□□□□ -0.04
EBF3-201ENST00000355311 CTNNAL1Q9UBT7 734 aa14.8□□□□□ -0.04
EBF3-201ENST00000355311 PI4K2BG5E9Z4 385 aa14.8□□□□□ -0.04
EBF3-201ENST00000355311 CSDE1O75534 798 aaKnown RBP14.8□□□□□ -0.04
EBF3-201ENST00000355311 ZBTB48P10074 688 aaPredicted RBP14.8□□□□□ -0.04
EBF3-201ENST00000355311 GBP2P32456 591 aaPredicted RBP14.8□□□□□ -0.04
EBF3-201ENST00000355311 RPL21P46778 160 aaKnown RBP14.8□□□□□ -0.04
EBF3-201ENST00000355311 SYCP2LQ5T4T6 812 aa14.8□□□□□ -0.04
EBF3-201ENST00000355311 CCDC137Q6PK04 289 aaKnown RBP14.8□□□□□ -0.04
EBF3-201ENST00000355311 RNF207Q6ZRF8 634 aa14.8□□□□□ -0.04
EBF3-201ENST00000355311 TMC3Q7Z5M5 1100 aa14.8□□□□□ -0.04
EBF3-201ENST00000355311 JAMLQ86YT9 394 aa14.8□□□□□ -0.04
EBF3-201ENST00000355311 CCDC50Q8IVM0 306 aa14.8□□□□□ -0.04
EBF3-201ENST00000355311 HERPUD2Q9BSE4 406 aa14.8□□□□□ -0.04
EBF3-201ENST00000355311 C10orf88Q9H8K7 445 aa14.8□□□□□ -0.04
EBF3-201ENST00000355311 TMBIM4Q9HC24 238 aa14.8□□□□□ -0.04
EBF3-201ENST00000355311 KMT5AQ9NQR1 393 aa14.8□□□□□ -0.04
EBF3-201ENST00000355311 DMAC2Q9NW81 257 aa14.8□□□□□ -0.04
EBF3-201ENST00000355311 SUCLA2Q9P2R7 463 aaPredicted RBP14.8□□□□□ -0.04
EBF3-201ENST00000355311 TRPC6Q9Y210 931 aa14.8□□□□□ -0.04
EBF3-201ENST00000355311 SIPA1L1O43166 1804 aa14.8□□□□□ -0.04
EBF3-201ENST00000355311 ZNF862O60290 1169 aa14.79□□□□□ -0.04
EBF3-201ENST00000355311 SLC15A2Q16348 729 aa14.79□□□□□ -0.04
EBF3-201ENST00000355311 PRELID2Q8N945 189 aa14.79□□□□□ -0.04
EBF3-201ENST00000355311 WHAMMQ8TF30 809 aa14.79□□□□□ -0.04
EBF3-201ENST00000355311 ACCSQ96QU6 501 aa14.79□□□□□ -0.04
EBF3-201ENST00000355311 RNF14Q9UBS8 474 aa14.79□□□□□ -0.04
EBF3-201ENST00000355311 ANKRD62A6NC57 917 aa14.79□□□□□ -0.04
EBF3-201ENST00000355311 H0YGN5 161 aa14.79□□□□□ -0.04
EBF3-201ENST00000355311 LONRF1Q17RB8 773 aa14.79□□□□□ -0.04
EBF3-201ENST00000355311 SPDYE2Q495Y8 402 aa14.79□□□□□ -0.04
EBF3-201ENST00000355311 EPS8L1Q8TE68 723 aa14.79□□□□□ -0.04
EBF3-201ENST00000355311 ATP8B4Q8TF62 1192 aa14.79□□□□□ -0.04
EBF3-201ENST00000355311 RNF25Q96BH1 459 aaPredicted RBP14.79□□□□□ -0.04
EBF3-201ENST00000355311 CD2APQ9Y5K6 639 aa14.79□□□□□ -0.04
EBF3-201ENST00000355311 NFS1Q9Y697 457 aa14.79□□□□□ -0.04
EBF3-201ENST00000355311 EIF3DO15371 548 aaKnown RBP eCLIP14.79□□□□□ -0.04
EBF3-201ENST00000355311 TMEM253P0C7T8 217 aa14.79□□□□□ -0.04
EBF3-201ENST00000355311 PLS3P13797 630 aa14.79□□□□□ -0.04
EBF3-201ENST00000355311 VCAM1P19320 739 aa14.79□□□□□ -0.04
EBF3-201ENST00000355311 MARK3P27448 753 aa14.79□□□□□ -0.04
EBF3-201ENST00000355311 ORC1Q13415 861 aa14.79□□□□□ -0.04
EBF3-201ENST00000355311 PGM5Q15124 567 aa14.79□□□□□ -0.04
EBF3-201ENST00000355311 STXBP4Q6ZWJ1 553 aa14.79□□□□□ -0.04
EBF3-201ENST00000355311 NIM1KQ8IY84 436 aa14.79□□□□□ -0.04
EBF3-201ENST00000355311 ZNF564Q8TBZ8 553 aaPredicted RBP14.79□□□□□ -0.04
EBF3-201ENST00000355311 R3HDMLQ9H3Y0 253 aa14.79□□□□□ -0.04
EBF3-201ENST00000355311 BRWD3Q6RI45 1802 aa14.78□□□□□ -0.04
EBF3-201ENST00000355311 ICAM1P05362 532 aa14.78□□□□□ -0.04
EBF3-201ENST00000355311 ASNSP08243 561 aa14.78□□□□□ -0.04
EBF3-201ENST00000355311 HSPA9P38646 679 aaKnown RBP14.78□□□□□ -0.04
EBF3-201ENST00000355311 GPC5P78333 572 aa14.78□□□□□ -0.04
EBF3-201ENST00000355311 CETN1Q12798 172 aa14.78□□□□□ -0.04
EBF3-201ENST00000355311 PPP1R7Q15435 360 aa14.78□□□□□ -0.04
EBF3-201ENST00000355311 SNRNP48Q6IEG0 339 aaKnown RBP14.78□□□□□ -0.04
EBF3-201ENST00000355311 SV2AQ7L0J3 742 aa14.78□□□□□ -0.04
EBF3-201ENST00000355311 SYCE1Q8N0S2 351 aa14.78□□□□□ -0.04
EBF3-201ENST00000355311 PPP1R13LQ8WUF5 828 aa14.78□□□□□ -0.04
EBF3-201ENST00000355311 TRIM6Q9C030 488 aaPredicted RBP14.78□□□□□ -0.04
EBF3-201ENST00000355311 CHST7Q9NS84 486 aa14.78□□□□□ -0.04
EBF3-201ENST00000355311 ANAPC7Q9UJX3 599 aa14.78□□□□□ -0.04
EBF3-201ENST00000355311 RARAP10276 462 aa14.78□□□□□ -0.04
EBF3-201ENST00000355311 CD58P19256 250 aa14.78□□□□□ -0.04
EBF3-201ENST00000355311 STYK1Q6J9G0 422 aa14.78□□□□□ -0.04
EBF3-201ENST00000355311 KDM7AQ6ZMT4 941 aa14.78□□□□□ -0.04
EBF3-201ENST00000355311 SLFN11Q7Z7L1 901 aa14.78□□□□□ -0.04
EBF3-201ENST00000355311 ZBTB33Q86T24 672 aa14.78□□□□□ -0.04
EBF3-201ENST00000355311 ANKRD42Q8N9B4 389 aa14.78□□□□□ -0.04
EBF3-201ENST00000355311 TCP11Q8WWU5 503 aa14.78□□□□□ -0.04
EBF3-201ENST00000355311 STAMBPL1Q96FJ0 436 aa14.78□□□□□ -0.04
EBF3-201ENST00000355311 MYOZ2Q9NPC6 264 aa14.78□□□□□ -0.04
EBF3-201ENST00000355311 A1CFQ9NQ94 594 aaKnown RBP14.78□□□□□ -0.04
EBF3-201ENST00000355311 FEM1BQ9UK73 627 aa14.78□□□□□ -0.04
EBF3-201ENST00000355311 TTLL13PA6NNM8 815 aa14.77□□□□□ -0.04
EBF3-201ENST00000355311 ENO4A6NNW6 628 aa14.77□□□□□ -0.04
EBF3-201ENST00000355311 FAM107AO95990 144 aa14.77□□□□□ -0.04
EBF3-201ENST00000355311 ZNF131P52739 623 aa14.77□□□□□ -0.04
EBF3-201ENST00000355311 FMO1Q01740 532 aa14.77□□□□□ -0.04
EBF3-201ENST00000355311 MYO1EQ12965 1108 aa14.77□□□□□ -0.04
EBF3-201ENST00000355311 HIBCHQ6NVY1 386 aaPredicted RBP14.77□□□□□ -0.04
EBF3-201ENST00000355311 MICALCLQ6ZW33 695 aa14.77□□□□□ -0.04
EBF3-201ENST00000355311 DPH6Q7L8W6 267 aa14.77□□□□□ -0.04
EBF3-201ENST00000355311 CPLX4Q7Z7G2 160 aa14.77□□□□□ -0.04
EBF3-201ENST00000355311 PNMA8AQ86V59 439 aaPredicted RBP14.77□□□□□ -0.04
EBF3-201ENST00000355311 RAPGEF5Q92565 580 aa14.77□□□□□ -0.04
EBF3-201ENST00000355311 C11orf70Q9BRQ4 267 aa14.77□□□□□ -0.04
EBF3-201ENST00000355311 RNF146Q9NTX7 359 aa14.77□□□□□ -0.04
EBF3-201ENST00000355311 LRRIQ4A6NIV6 560 aa14.77□□□□□ -0.05
EBF3-201ENST00000355311 CYP11B1P15538 503 aa14.77□□□□□ -0.05
EBF3-201ENST00000355311 RRM1P23921 792 aa14.77□□□□□ -0.05
EBF3-201ENST00000355311 BRD2P25440 801 aaKnown RBP14.77□□□□□ -0.05
EBF3-201ENST00000355311 CNTN2Q02246 1040 aa14.77□□□□□ -0.05
EBF3-201ENST00000355311 SLC39A4Q6P5W5 647 aa14.77□□□□□ -0.05
EBF3-201ENST00000355311 CNKSR2Q8WXI2 1034 aa14.77□□□□□ -0.05
EBF3-201ENST00000355311 ERP44Q9BS26 406 aa14.77□□□□□ -0.05
EBF3-201ENST00000355311 ASIC3Q9UHC3 531 aa14.77□□□□□ -0.05
EBF3-201ENST00000355311 TTC7AQ9ULT0 858 aaPredicted RBP14.77□□□□□ -0.05
EBF3-201ENST00000355311 TBX20Q9UMR3 447 aa14.77□□□□□ -0.05
EBF3-201ENST00000355311 CTNND1O60716 968 aaKnown RBP14.76□□□□□ -0.05
EBF3-201ENST00000355311 TCF4P15884 667 aa14.76□□□□□ -0.05
Retrieved 100 of 20,778 RNA–protein pairs in 38.4 ms