RNA–Protein interactions for RNA: ENST00000354848.5

CD46-203, Transcript of CD46 molecule, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene CD46, Length 3,233 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CD46-203ENST00000354848 THAP12O43422 761 aa8.38□□□□□ -1.07
CD46-203ENST00000354848 RNASEH1O60930 286 aaKnown RBP8.38□□□□□ -1.07
CD46-203ENST00000354848 MPP3Q13368 585 aa8.38□□□□□ -1.07
CD46-203ENST00000354848 EPHA7Q15375 998 aa8.38□□□□□ -1.07
CD46-203ENST00000354848 ECM1Q16610 540 aa8.38□□□□□ -1.07
CD46-203ENST00000354848 PDK4Q16654 411 aa8.38□□□□□ -1.07
CD46-203ENST00000354848 P3H1Q32P28 736 aa8.38□□□□□ -1.07
CD46-203ENST00000354848 RBM26Q5T8P6 1007 aaKnown RBP8.38□□□□□ -1.07
CD46-203ENST00000354848 OLFML2BQ68BL8 750 aa8.38□□□□□ -1.07
CD46-203ENST00000354848 PNMA1Q8ND90 353 aa8.38□□□□□ -1.07
CD46-203ENST00000354848 DENND1AQ8TEH3 1009 aa8.38□□□□□ -1.07
CD46-203ENST00000354848 MCUR1Q96AQ8 359 aa8.38□□□□□ -1.07
CD46-203ENST00000354848 MPP4Q96JB8 637 aa8.38□□□□□ -1.07
CD46-203ENST00000354848 EMILIN3Q9NT22 766 aa8.38□□□□□ -1.07
CD46-203ENST00000354848 ARL8BQ9NVJ2 186 aa8.38□□□□□ -1.07
CD46-203ENST00000354848 EURLQ9NYK6 297 aa8.38□□□□□ -1.07
CD46-203ENST00000354848 LRP5O75197 1615 aa8.38□□□□□ -1.07
CD46-203ENST00000354848 PPAN-P2RY11A0A0B4J1V8 794 aaPredicted RBP8.37□□□□□ -1.07
CD46-203ENST00000354848 A0A0J9YVX5 310 aa8.37□□□□□ -1.07
CD46-203ENST00000354848 ZWINTO95229 277 aa8.37□□□□□ -1.07
CD46-203ENST00000354848 GGPS1O95749 300 aa8.37□□□□□ -1.07
CD46-203ENST00000354848 LMNB1P20700 586 aa8.37□□□□□ -1.07
CD46-203ENST00000354848 STAT1P42224 750 aa8.37□□□□□ -1.07
CD46-203ENST00000354848 CD151P48509 253 aa8.37□□□□□ -1.07
CD46-203ENST00000354848 FXR2P51116 673 aaKnown RBP eCLIP8.37□□□□□ -1.07
CD46-203ENST00000354848 THOC5Q13769 683 aaKnown RBP8.37□□□□□ -1.07
CD46-203ENST00000354848 CALCRLQ16602 461 aa8.37□□□□□ -1.07
CD46-203ENST00000354848 TMEM119Q4V9L6 283 aa8.37□□□□□ -1.07
CD46-203ENST00000354848 PLEKHG4Q58EX7 1191 aa8.37□□□□□ -1.07
CD46-203ENST00000354848 SEL1L2Q5TEA6 688 aa8.37□□□□□ -1.07
CD46-203ENST00000354848 NLRP10Q86W26 655 aa8.37□□□□□ -1.07
CD46-203ENST00000354848 KSR1Q8IVT5 923 aa8.37□□□□□ -1.07
CD46-203ENST00000354848 SCYL3Q8IZE3 742 aa8.37□□□□□ -1.07
CD46-203ENST00000354848 ST13P4Q8IZP2 240 aaPredicted RBP8.37□□□□□ -1.07
CD46-203ENST00000354848 NME8Q8N427 588 aa8.37□□□□□ -1.07
CD46-203ENST00000354848 UBL4BQ8N7F7 174 aa8.37□□□□□ -1.07
CD46-203ENST00000354848 PTCD3Q96EY7 689 aaKnown RBP8.37□□□□□ -1.07
CD46-203ENST00000354848 ECSITQ9BQ95 431 aa8.37□□□□□ -1.07
CD46-203ENST00000354848 TAS2R14Q9NYV8 317 aa8.37□□□□□ -1.07
CD46-203ENST00000354848 NINJ2Q9NZG7 142 aa8.37□□□□□ -1.07
CD46-203ENST00000354848 WHRNQ9P202 907 aa8.37□□□□□ -1.07
CD46-203ENST00000354848 PCDH11YQ9BZA8 1340 aa8.37□□□□□ -1.07
CD46-203ENST00000354848 MIF4GDA9UHW6 222 aaKnown RBP8.37□□□□□ -1.07
CD46-203ENST00000354848 AMPD1P23109 780 aa8.37□□□□□ -1.07
CD46-203ENST00000354848 SERPINB3P29508 390 aa8.37□□□□□ -1.07
CD46-203ENST00000354848 GRIA2P42262 883 aa8.37□□□□□ -1.07
CD46-203ENST00000354848 NAPAP54920 295 aa8.37□□□□□ -1.07
CD46-203ENST00000354848 HPCAP84074 193 aa8.37□□□□□ -1.07
CD46-203ENST00000354848 SPARCL1Q14515 664 aa8.37□□□□□ -1.07
CD46-203ENST00000354848 TMED2Q15363 201 aa8.37□□□□□ -1.07
CD46-203ENST00000354848 SIX1Q15475 284 aaPredicted RBP8.37□□□□□ -1.07
CD46-203ENST00000354848 TMEM266Q2M3C6 531 aa8.37□□□□□ -1.07
CD46-203ENST00000354848 EDRF1Q3B7T1 1238 aa8.37□□□□□ -1.07
CD46-203ENST00000354848 DCAF17Q5H9S7 520 aaPredicted RBP8.37□□□□□ -1.07
CD46-203ENST00000354848 KRT79Q5XKE5 535 aa8.37□□□□□ -1.07
CD46-203ENST00000354848 PHLDB3Q6NSJ2 640 aa8.37□□□□□ -1.07
CD46-203ENST00000354848 KIF6Q6ZMV9 814 aa8.37□□□□□ -1.07
CD46-203ENST00000354848 OTOAQ7RTW8 1153 aa8.37□□□□□ -1.07
CD46-203ENST00000354848 FRMD5Q7Z6J6 570 aa8.37□□□□□ -1.07
CD46-203ENST00000354848 PRUNE1Q86TP1 453 aa8.37□□□□□ -1.07
CD46-203ENST00000354848 NMD3Q96D46 503 aaKnown RBP8.37□□□□□ -1.07
CD46-203ENST00000354848 FNBP1Q96RU3 617 aa8.37□□□□□ -1.07
CD46-203ENST00000354848 ZSWIM1Q9BR11 485 aa8.37□□□□□ -1.07
CD46-203ENST00000354848 DNAJC5Q9H3Z4 198 aa8.37□□□□□ -1.07
CD46-203ENST00000354848 NPHS2Q9NP85 383 aa8.37□□□□□ -1.07
CD46-203ENST00000354848 GCNT4Q9P109 453 aa8.37□□□□□ -1.07
CD46-203ENST00000354848 SUGT1Q9Y2Z0 365 aa8.37□□□□□ -1.07
CD46-203ENST00000354848 COL1A1P02452 1464 aaPredicted RBP8.37□□□□□ -1.07
CD46-203ENST00000354848 CFAP69A5D8W1 941 aa8.37□□□□□ -1.07
CD46-203ENST00000354848 SMCO2A6NFE2 343 aa8.37□□□□□ -1.07
CD46-203ENST00000354848 TMEM221A6NGB7 291 aa8.37□□□□□ -1.07
CD46-203ENST00000354848 PYGMP11217 842 aa8.37□□□□□ -1.07
CD46-203ENST00000354848 FGFR1P11362 822 aa8.37□□□□□ -1.07
CD46-203ENST00000354848 XRCC5P13010 732 aaKnown RBP8.37□□□□□ -1.07
CD46-203ENST00000354848 CACNB1Q02641 598 aaPredicted RBP8.37□□□□□ -1.07
CD46-203ENST00000354848 CBX3Q13185 183 aa8.37□□□□□ -1.07
CD46-203ENST00000354848 GRM4Q14833 912 aa8.37□□□□□ -1.07
CD46-203ENST00000354848 R3HDM1Q15032 1099 aaKnown RBP8.37□□□□□ -1.07
CD46-203ENST00000354848 LARP7Q4G0J3 582 aaKnown RBP eCLIP8.37□□□□□ -1.07
CD46-203ENST00000354848 CFAP157Q5JU67 520 aa8.37□□□□□ -1.07
CD46-203ENST00000354848 VPS52Q8N1B4 723 aa8.37□□□□□ -1.07
CD46-203ENST00000354848 PDCD7Q8N8D1 485 aaKnown RBP8.37□□□□□ -1.07
CD46-203ENST00000354848 MAML1Q92585 1016 aa8.37□□□□□ -1.07
CD46-203ENST00000354848 CLMNQ96JQ2 1002 aa8.37□□□□□ -1.07
CD46-203ENST00000354848 DNAJC1Q96KC8 554 aaKnown RBP8.37□□□□□ -1.07
CD46-203ENST00000354848 PWWP2AQ96N64 755 aa8.37□□□□□ -1.07
CD46-203ENST00000354848 CLIC5Q9NZA1 410 aa8.37□□□□□ -1.07
CD46-203ENST00000354848 ANGPTL2Q9UKU9 493 aa8.37□□□□□ -1.07
CD46-203ENST00000354848 MTMR7Q9Y216 660 aa8.37□□□□□ -1.07
CD46-203ENST00000354848 SLC37A4O43826 429 aa8.36□□□□□ -1.07
CD46-203ENST00000354848 ATP9BO43861 1147 aa8.36□□□□□ -1.07
CD46-203ENST00000354848 RAD21O60216 631 aa8.36□□□□□ -1.07
CD46-203ENST00000354848 ITIH2P19823 946 aa8.36□□□□□ -1.07
CD46-203ENST00000354848 EIF4BP23588 611 aaKnown RBP8.36□□□□□ -1.07
CD46-203ENST00000354848 CRABP2P29373 138 aa8.36□□□□□ -1.07
CD46-203ENST00000354848 KRT17Q04695 432 aa8.36□□□□□ -1.07
CD46-203ENST00000354848 HERC4Q5GLZ8 1057 aaPredicted RBP8.36□□□□□ -1.07
CD46-203ENST00000354848 TCERG1LQ5VWI1 586 aa8.36□□□□□ -1.07
CD46-203ENST00000354848 DUS1LQ6P1R4 473 aaKnown RBP8.36□□□□□ -1.07
CD46-203ENST00000354848 PPP4R3CPQ6ZMV5 832 aa8.36□□□□□ -1.07
Retrieved 100 of 20,778 RNA–protein pairs in 39.7 ms