RNA–Protein interactions for RNA: ENST00000354822.6

NKX2-1-201, Transcript of NK2 homeobox 1, humanhuman

TSL 1 (best) BASIC

Gene NKX2-1, Length 2,191 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NKX2-1-201ENST00000354822 TMOD4Q9NZQ9 345 aa23.93■■□□□ 1.42
NKX2-1-201ENST00000354822 ARHGAP28Q9P2N2 729 aa23.93■■□□□ 1.42
NKX2-1-201ENST00000354822 NR2E1Q9Y466 385 aa23.93■■□□□ 1.42
NKX2-1-201ENST00000354822 H0YGN5 161 aa23.92■■□□□ 1.42
NKX2-1-201ENST00000354822 KIAA0391O15091 583 aaKnown RBP23.92■■□□□ 1.42
NKX2-1-201ENST00000354822 COMTP21964 271 aa23.92■■□□□ 1.42
NKX2-1-201ENST00000354822 CHRNA3P32297 505 aa23.92■■□□□ 1.42
NKX2-1-201ENST00000354822 MESDQ14696 234 aa23.92■■□□□ 1.42
NKX2-1-201ENST00000354822 DNAJC21Q5F1R6 531 aaKnown RBP23.92■■□□□ 1.42
NKX2-1-201ENST00000354822 SEL1L2Q5TEA6 688 aa23.92■■□□□ 1.42
NKX2-1-201ENST00000354822 PROCA1Q8NCQ7 364 aaPredicted RBP23.92■■□□□ 1.42
NKX2-1-201ENST00000354822 KCNN1Q92952 543 aa23.92■■□□□ 1.42
NKX2-1-201ENST00000354822 BICD1Q96G01 975 aa23.92■■□□□ 1.42
NKX2-1-201ENST00000354822 TSPYL1Q9H0U9 437 aa23.92■■□□□ 1.42
NKX2-1-201ENST00000354822 RRP15Q9Y3B9 282 aaKnown RBP23.92■■□□□ 1.42
NKX2-1-201ENST00000354822 PPP2R3BQ9Y5P8 575 aa23.92■■□□□ 1.42
NKX2-1-201ENST00000354822 NFS1Q9Y697 457 aa23.92■■□□□ 1.42
NKX2-1-201ENST00000354822 PHIPQ8WWQ0 1821 aa23.92■■□□□ 1.42
NKX2-1-201ENST00000354822 NR1D1P20393 614 aa23.92■■□□□ 1.42
NKX2-1-201ENST00000354822 PEX5P50542 639 aa23.92■■□□□ 1.42
NKX2-1-201ENST00000354822 PRKCEQ02156 737 aa23.92■■□□□ 1.42
NKX2-1-201ENST00000354822 ZNF211Q13398 564 aaPredicted RBP23.92■■□□□ 1.42
NKX2-1-201ENST00000354822 UAP1Q16222 522 aaPredicted RBP23.92■■□□□ 1.42
NKX2-1-201ENST00000354822 PRAMEF18Q5VWM3 479 aa23.92■■□□□ 1.42
NKX2-1-201ENST00000354822 NAA35Q5VZE5 725 aa23.92■■□□□ 1.42
NKX2-1-201ENST00000354822 DUPD1Q68J44 220 aa23.92■■□□□ 1.42
NKX2-1-201ENST00000354822 MYPNQ86TC9 1320 aa23.92■■□□□ 1.42
NKX2-1-201ENST00000354822 SH2D3CQ8N5H7 860 aa23.92■■□□□ 1.42
NKX2-1-201ENST00000354822 ARFGAP2Q8N6H7 521 aa23.92■■□□□ 1.42
NKX2-1-201ENST00000354822 ZNF564Q8TBZ8 553 aaPredicted RBP23.92■■□□□ 1.42
NKX2-1-201ENST00000354822 XPNPEP1Q9NQW7 623 aa23.92■■□□□ 1.42
NKX2-1-201ENST00000354822 TRPC6Q9Y210 931 aa23.92■■□□□ 1.42
NKX2-1-201ENST00000354822 RLFQ13129 1914 aa23.91■■□□□ 1.42
NKX2-1-201ENST00000354822 GRIN2DO15399 1336 aa23.91■■□□□ 1.42
NKX2-1-201ENST00000354822 PHF2O75151 1096 aa23.91■■□□□ 1.42
NKX2-1-201ENST00000354822 GBP1P32455 592 aa23.91■■□□□ 1.42
NKX2-1-201ENST00000354822 BIRC3Q13489 604 aa23.91■■□□□ 1.42
NKX2-1-201ENST00000354822 ACAD10Q6JQN1 1059 aa23.91■■□□□ 1.42
NKX2-1-201ENST00000354822 TMC3Q7Z5M5 1100 aa23.91■■□□□ 1.42
NKX2-1-201ENST00000354822 CCDC60Q8IWA6 550 aaPredicted RBP23.91■■□□□ 1.42
NKX2-1-201ENST00000354822 CD101Q93033 1021 aa23.91■■□□□ 1.42
NKX2-1-201ENST00000354822 RUNDC3BQ96NL0 473 aa23.91■■□□□ 1.42
NKX2-1-201ENST00000354822 NUP85Q9BW27 656 aa23.91■■□□□ 1.42
NKX2-1-201ENST00000354822 A1CFQ9NQ94 594 aaKnown RBP23.91■■□□□ 1.42
NKX2-1-201ENST00000354822 WDR81Q562E7 1941 aa23.91■■□□□ 1.42
NKX2-1-201ENST00000354822 DICER1Q9UPY3 1922 aaKnown RBP23.91■■□□□ 1.42
NKX2-1-201ENST00000354822 TULP1O00294 542 aaPredicted RBP23.91■■□□□ 1.42
NKX2-1-201ENST00000354822 PODXLO00592 558 aa23.91■■□□□ 1.42
NKX2-1-201ENST00000354822 EXTL3O43909 919 aa23.91■■□□□ 1.42
NKX2-1-201ENST00000354822 DLATP10515 647 aaKnown RBP23.91■■□□□ 1.42
NKX2-1-201ENST00000354822 CTNNA2P26232 953 aa23.91■■□□□ 1.42
NKX2-1-201ENST00000354822 FMO2Q99518 471 aa23.91■■□□□ 1.42
NKX2-1-201ENST00000354822 ADGRA3Q8IWK6 1321 aa23.9■■□□□ 1.42
NKX2-1-201ENST00000354822 TMEM110-MUSTN1A8MSY1 372 aa23.9■■□□□ 1.42
NKX2-1-201ENST00000354822 SUPT20HL2P0C7V6 817 aa23.9■■□□□ 1.42
NKX2-1-201ENST00000354822 SOX10P56693 466 aa23.9■■□□□ 1.42
NKX2-1-201ENST00000354822 CLDN10P78369 228 aa23.9■■□□□ 1.42
NKX2-1-201ENST00000354822 SUPT20HL1Q3ZLR7 823 aa23.9■■□□□ 1.42
NKX2-1-201ENST00000354822 BCAS4Q8TDM0 211 aa23.9■■□□□ 1.42
NKX2-1-201ENST00000354822 UBLCP1Q8WVY7 318 aaPredicted RBP23.9■■□□□ 1.42
NKX2-1-201ENST00000354822 DDX1Q92499 740 aaKnown RBP23.9■■□□□ 1.42
NKX2-1-201ENST00000354822 ZNF653Q96CK0 615 aa23.9■■□□□ 1.42
NKX2-1-201ENST00000354822 POLR3FQ9H1D9 316 aaPredicted RBP23.9■■□□□ 1.42
NKX2-1-201ENST00000354822 DPH5Q9H2P9 285 aa23.9■■□□□ 1.42
NKX2-1-201ENST00000354822 UTP3Q9NQZ2 479 aaKnown RBP eCLIP23.9■■□□□ 1.42
NKX2-1-201ENST00000354822 GGA3Q9NZ52 723 aa23.9■■□□□ 1.42
NKX2-1-201ENST00000354822 PCYOX1Q9UHG3 505 aa23.9■■□□□ 1.42
NKX2-1-201ENST00000354822 PCDHA3Q9Y5H8 950 aa23.9■■□□□ 1.42
NKX2-1-201ENST00000354822 COL11A1P12107 1806 aaPredicted RBP23.9■■□□□ 1.42
NKX2-1-201ENST00000354822 KIAA1217Q5T5P2 1943 aa23.89■■□□□ 1.42
NKX2-1-201ENST00000354822 ZNF677Q86XU0 584 aa23.89■■□□□ 1.42
NKX2-1-201ENST00000354822 GPC2Q8N158 579 aa23.89■■□□□ 1.42
NKX2-1-201ENST00000354822 KRT35Q92764 455 aa23.89■■□□□ 1.42
NKX2-1-201ENST00000354822 KLRG1Q96E93 195 aa23.89■■□□□ 1.42
NKX2-1-201ENST00000354822 FAM213AQ9BRX8 229 aa23.89■■□□□ 1.42
NKX2-1-201ENST00000354822 ERVK-5Q9HDB9 667 aa23.89■■□□□ 1.42
NKX2-1-201ENST00000354822 TOPORSQ9NS56 1045 aaPredicted RBP23.89■■□□□ 1.42
NKX2-1-201ENST00000354822 MTUS1Q9ULD2 1270 aa23.89■■□□□ 1.42
NKX2-1-201ENST00000354822 LIG4P49917 911 aa23.89■■□□□ 1.41
NKX2-1-201ENST00000354822 DHX9Q08211 1270 aaKnown RBP23.89■■□□□ 1.41
NKX2-1-201ENST00000354822 C15orf39Q6ZRI6 1047 aa23.89■■□□□ 1.41
NKX2-1-201ENST00000354822 DNERQ8NFT8 737 aa23.89■■□□□ 1.41
NKX2-1-201ENST00000354822 TATDN2Q93075 761 aa23.89■■□□□ 1.41
NKX2-1-201ENST00000354822 FAM107BQ9H098 131 aa23.89■■□□□ 1.41
NKX2-1-201ENST00000354822 SPOPO43791 374 aa23.88■■□□□ 1.41
NKX2-1-201ENST00000354822 PPFIA2O75334 1257 aa23.88■■□□□ 1.41
NKX2-1-201ENST00000354822 ICAM3P32942 547 aa23.88■■□□□ 1.41
NKX2-1-201ENST00000354822 FLT3P36888 993 aa23.88■■□□□ 1.41
NKX2-1-201ENST00000354822 EIF3BP55884 814 aaKnown RBP23.88■■□□□ 1.41
NKX2-1-201ENST00000354822 BPIFB4P59827 614 aa23.88■■□□□ 1.41
NKX2-1-201ENST00000354822 ZNF844Q08AG5 666 aa23.88■■□□□ 1.41
NKX2-1-201ENST00000354822 STRN3Q13033 797 aa23.88■■□□□ 1.41
NKX2-1-201ENST00000354822 STXBP2Q15833 593 aa23.88■■□□□ 1.41
NKX2-1-201ENST00000354822 ADAT2Q7Z6V5 191 aaKnown RBP23.88■■□□□ 1.41
NKX2-1-201ENST00000354822 JAMLQ86YT9 394 aa23.88■■□□□ 1.41
NKX2-1-201ENST00000354822 ATP8B4Q8TF62 1192 aa23.88■■□□□ 1.41
NKX2-1-201ENST00000354822 TRIM51Q9BSJ1 452 aa23.88■■□□□ 1.41
NKX2-1-201ENST00000354822 PLVAPQ9BX97 442 aa23.88■■□□□ 1.41
NKX2-1-201ENST00000354822 ACP6Q9NPH0 428 aa23.88■■□□□ 1.41
NKX2-1-201ENST00000354822 C1orf112Q9NSG2 853 aa23.88■■□□□ 1.41
Retrieved 100 of 20,778 RNA–protein pairs in 17.6 ms