RNA–Protein interactions for RNA: ENST00000354325.2

TRERF1-202, Transcript of transcriptional regulating factor 1, humanhuman

TSL 5 BASIC

Gene TRERF1, Length 4,138 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRERF1-202ENST00000354325 MOXD1Q6UVY6 613 aa13.1□□□□□ -0.31
TRERF1-202ENST00000354325 TPTE2Q6XPS3 522 aa13.1□□□□□ -0.31
TRERF1-202ENST00000354325 LRRC74BQ6ZQY2 392 aa13.1□□□□□ -0.31
TRERF1-202ENST00000354325 KLHL23Q8NBE8 558 aa13.1□□□□□ -0.31
TRERF1-202ENST00000354325 NSL1Q96IY1 281 aa13.1□□□□□ -0.31
TRERF1-202ENST00000354325 MTO1Q9Y2Z2 717 aaKnown RBP13.1□□□□□ -0.31
TRERF1-202ENST00000354325 P4HA2O15460 535 aa13.09□□□□□ -0.31
TRERF1-202ENST00000354325 AP2B1P63010 937 aa13.09□□□□□ -0.31
TRERF1-202ENST00000354325 PTK6Q13882 451 aa13.09□□□□□ -0.31
TRERF1-202ENST00000354325 GPATCH4Q5T3I0 446 aaKnown RBP13.09□□□□□ -0.31
TRERF1-202ENST00000354325 NLRP9Q7RTR0 991 aa13.09□□□□□ -0.31
TRERF1-202ENST00000354325 USP37Q86T82 979 aa13.09□□□□□ -0.31
TRERF1-202ENST00000354325 TRIM42Q8IWZ5 723 aa13.09□□□□□ -0.31
TRERF1-202ENST00000354325 GFM2Q969S9 779 aaKnown RBP13.09□□□□□ -0.31
TRERF1-202ENST00000354325 ERVK-5Q9HDB9 667 aa13.09□□□□□ -0.31
TRERF1-202ENST00000354325 TFCP2L1Q9NZI6 479 aa13.09□□□□□ -0.31
TRERF1-202ENST00000354325 TRIM33Q9UPN9 1127 aa13.09□□□□□ -0.31
TRERF1-202ENST00000354325 NAALADL1Q9UQQ1 740 aa13.09□□□□□ -0.31
TRERF1-202ENST00000354325 LOC102724428A0A0B4J2F2 783 aa13.09□□□□□ -0.31
TRERF1-202ENST00000354325 C2CD2LO14523 706 aa13.09□□□□□ -0.31
TRERF1-202ENST00000354325 ZBTB48P10074 688 aaPredicted RBP13.09□□□□□ -0.31
TRERF1-202ENST00000354325 DESP17661 470 aa13.09□□□□□ -0.31
TRERF1-202ENST00000354325 COPB2P35606 906 aa13.09□□□□□ -0.31
TRERF1-202ENST00000354325 PSMC4P43686 418 aa13.09□□□□□ -0.31
TRERF1-202ENST00000354325 SIK1P57059 783 aa13.09□□□□□ -0.31
TRERF1-202ENST00000354325 KIF22Q14807 665 aa13.09□□□□□ -0.31
TRERF1-202ENST00000354325 NFIL3Q16649 462 aa13.09□□□□□ -0.31
TRERF1-202ENST00000354325 PDK4Q16654 411 aa13.09□□□□□ -0.31
TRERF1-202ENST00000354325 KYNUQ16719 465 aa13.09□□□□□ -0.31
TRERF1-202ENST00000354325 CCDC110Q8TBZ0 833 aa13.09□□□□□ -0.31
TRERF1-202ENST00000354325 DYNLL2Q96FJ2 89 aa13.09□□□□□ -0.31
TRERF1-202ENST00000354325 BTBD10Q9BSF8 475 aa13.09□□□□□ -0.31
TRERF1-202ENST00000354325 KIAA1683Q9H0B3 1180 aa13.09□□□□□ -0.31
TRERF1-202ENST00000354325 RNF8O76064 485 aa13.09□□□□□ -0.31
TRERF1-202ENST00000354325 AP1B1Q10567 949 aa13.09□□□□□ -0.31
TRERF1-202ENST00000354325 KCNK18Q7Z418 384 aa13.09□□□□□ -0.31
TRERF1-202ENST00000354325 GLIS3Q8NEA6 775 aa13.09□□□□□ -0.31
TRERF1-202ENST00000354325 RBM41Q96IZ5 413 aaKnown RBP13.09□□□□□ -0.31
TRERF1-202ENST00000354325 ZNF184Q99676 751 aaPredicted RBP13.09□□□□□ -0.31
TRERF1-202ENST00000354325 NMRK1Q9NWW6 199 aa13.09□□□□□ -0.31
TRERF1-202ENST00000354325 UBR2Q8IWV8 1755 aa13.09□□□□□ -0.31
TRERF1-202ENST00000354325 POTEB3A0JP26 581 aa13.08□□□□□ -0.31
TRERF1-202ENST00000354325 PRPF4O43172 522 aaKnown RBP eCLIP13.08□□□□□ -0.31
TRERF1-202ENST00000354325 AKAP3O75969 853 aa13.08□□□□□ -0.31
TRERF1-202ENST00000354325 EPHB2P29323 1055 aa13.08□□□□□ -0.31
TRERF1-202ENST00000354325 PPP1R15BQ5SWA1 713 aa13.08□□□□□ -0.31
TRERF1-202ENST00000354325 POTEBQ6S5H4 581 aa13.08□□□□□ -0.31
TRERF1-202ENST00000354325 ZNF564Q8TBZ8 553 aaPredicted RBP13.08□□□□□ -0.31
TRERF1-202ENST00000354325 SCG3Q8WXD2 468 aaKnown RBP13.08□□□□□ -0.31
TRERF1-202ENST00000354325 GJA10Q969M2 543 aa13.08□□□□□ -0.31
TRERF1-202ENST00000354325 RGPD5Q99666 1765 aa13.08□□□□□ -0.31
TRERF1-202ENST00000354325 ATXN10Q9UBB4 475 aa13.08□□□□□ -0.31
TRERF1-202ENST00000354325 USP21Q9UK80 565 aa13.08□□□□□ -0.31
TRERF1-202ENST00000354325 PCDHA3Q9Y5H8 950 aa13.08□□□□□ -0.31
TRERF1-202ENST00000354325 DLEC1Q9Y238 1755 aa13.08□□□□□ -0.32
TRERF1-202ENST00000354325 GLI3P10071 1580 aa13.08□□□□□ -0.32
TRERF1-202ENST00000354325 CAPN9O14815 690 aa13.08□□□□□ -0.32
TRERF1-202ENST00000354325 ZNF76P36508 570 aa13.08□□□□□ -0.32
TRERF1-202ENST00000354325 SLC1A1P43005 524 aa13.08□□□□□ -0.32
TRERF1-202ENST00000354325 CACNB1Q02641 598 aaPredicted RBP13.08□□□□□ -0.32
TRERF1-202ENST00000354325 DNAJC3Q13217 504 aa13.08□□□□□ -0.32
TRERF1-202ENST00000354325 AP3B2Q13367 1082 aa13.08□□□□□ -0.32
TRERF1-202ENST00000354325 CTTNQ14247 550 aaKnown RBP13.08□□□□□ -0.32
TRERF1-202ENST00000354325 MYCT1Q8N699 235 aa13.08□□□□□ -0.32
TRERF1-202ENST00000354325 ALG3Q92685 438 aa13.08□□□□□ -0.32
TRERF1-202ENST00000354325 MAML3Q96JK9 1138 aa13.08□□□□□ -0.32
TRERF1-202ENST00000354325 MTA2O94776 668 aa13.08□□□□□ -0.32
TRERF1-202ENST00000354325 TJP3O95049 919 aa13.08□□□□□ -0.32
TRERF1-202ENST00000354325 ITGA8P53708 1063 aa13.08□□□□□ -0.32
TRERF1-202ENST00000354325 C7orf43Q8WVR3 580 aa13.08□□□□□ -0.32
TRERF1-202ENST00000354325 ZNF653Q96CK0 615 aa13.08□□□□□ -0.32
TRERF1-202ENST00000354325 RABGAP1Q9Y3P9 1069 aa13.08□□□□□ -0.32
TRERF1-202ENST00000354325 NR2E1Q9Y466 385 aa13.08□□□□□ -0.32
TRERF1-202ENST00000354325 PCDHA2Q9Y5H9 948 aa13.08□□□□□ -0.32
TRERF1-202ENST00000354325 IKBKGQ9Y6K9 419 aa13.08□□□□□ -0.32
TRERF1-202ENST00000354325 TRPM3Q9HCF6 1732 aaPredicted RBP13.07□□□□□ -0.32
TRERF1-202ENST00000354325 EDF1O60869 148 aaKnown RBP13.07□□□□□ -0.32
TRERF1-202ENST00000354325 FOSP01100 380 aaPredicted RBP13.07□□□□□ -0.32
TRERF1-202ENST00000354325 C4orf50Q6ZRC1 276 aa13.07□□□□□ -0.32
TRERF1-202ENST00000354325 RNF168Q8IYW5 571 aaPredicted RBP13.07□□□□□ -0.32
TRERF1-202ENST00000354325 SLC17A8Q8NDX2 589 aa13.07□□□□□ -0.32
TRERF1-202ENST00000354325 STKLD1Q8NE28 680 aa13.07□□□□□ -0.32
TRERF1-202ENST00000354325 TGFBRAP1Q8WUH2 860 aa13.07□□□□□ -0.32
TRERF1-202ENST00000354325 FAM20AQ96MK3 541 aa13.07□□□□□ -0.32
TRERF1-202ENST00000354325 NDE1Q9NXR1 346 aa13.07□□□□□ -0.32
TRERF1-202ENST00000354325 THEGQ9P2T0 379 aa13.07□□□□□ -0.32
TRERF1-202ENST00000354325 STX18Q9P2W9 335 aaKnown RBP13.07□□□□□ -0.32
TRERF1-202ENST00000354325 EIF4E1BA6NMX2 242 aaKnown RBP13.07□□□□□ -0.32
TRERF1-202ENST00000354325 RASA1P20936 1047 aa13.07□□□□□ -0.32
TRERF1-202ENST00000354325 CDK8P49336 464 aa13.07□□□□□ -0.32
TRERF1-202ENST00000354325 PABPC4Q13310 644 aaKnown RBP eCLIP13.07□□□□□ -0.32
TRERF1-202ENST00000354325 MYBPC2Q14324 1141 aa13.07□□□□□ -0.32
TRERF1-202ENST00000354325 DBN1Q16643 649 aa13.07□□□□□ -0.32
TRERF1-202ENST00000354325 DCAF12L1Q5VU92 463 aa13.07□□□□□ -0.32
TRERF1-202ENST00000354325 COA7Q96BR5 231 aa13.07□□□□□ -0.32
TRERF1-202ENST00000354325 SYT15Q9BQS2 421 aa13.07□□□□□ -0.32
TRERF1-202ENST00000354325 NKX1-2Q9UD57 310 aaPredicted RBP13.07□□□□□ -0.32
TRERF1-202ENST00000354325 SLC24A2Q9UI40 661 aa13.07□□□□□ -0.32
TRERF1-202ENST00000354325 GTF3C4Q9UKN8 822 aa13.07□□□□□ -0.32
TRERF1-202ENST00000354325 MINPP1Q9UNW1 487 aa13.07□□□□□ -0.32
Retrieved 100 of 20,778 RNA–protein pairs in 21.2 ms