RNA–Protein interactions for RNA: ENST00000353047.10

CTSB-202, Transcript of cathepsin B, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CTSB, Length 3,875 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTSB-202ENST00000353047 NOP9Q86U38 636 aaKnown RBP19.25■□□□□ 0.67
CTSB-202ENST00000353047 EXOC3L1Q86VI1 746 aa19.25■□□□□ 0.67
CTSB-202ENST00000353047 AGBL1Q96MI9 1066 aa19.25■□□□□ 0.67
CTSB-202ENST00000353047 MARCOQ9UEW3 520 aaPredicted RBP19.25■□□□□ 0.67
CTSB-202ENST00000353047 TRAF3IP3Q9Y228 551 aa19.25■□□□□ 0.67
CTSB-202ENST00000353047 CCDC160A6NGH7 325 aa19.25■□□□□ 0.67
CTSB-202ENST00000353047 KRT1P04264 644 aa19.25■□□□□ 0.67
CTSB-202ENST00000353047 KRT16P08779 473 aa19.25■□□□□ 0.67
CTSB-202ENST00000353047 RRM1P23921 792 aa19.25■□□□□ 0.67
CTSB-202ENST00000353047 PIK3CAP42336 1068 aa19.25■□□□□ 0.67
CTSB-202ENST00000353047 AP3B2Q13367 1082 aa19.25■□□□□ 0.67
CTSB-202ENST00000353047 AUHQ13825 339 aaKnown RBP19.25■□□□□ 0.67
CTSB-202ENST00000353047 SMTNL2Q2TAL5 461 aa19.25■□□□□ 0.67
CTSB-202ENST00000353047 ATP13A4Q4VNC1 1196 aa19.25■□□□□ 0.67
CTSB-202ENST00000353047 SLC10A5Q5PT55 438 aa19.25■□□□□ 0.67
CTSB-202ENST00000353047 ISLR2Q6UXK2 745 aa19.25■□□□□ 0.67
CTSB-202ENST00000353047 APBB1IPQ7Z5R6 666 aaPredicted RBP19.25■□□□□ 0.67
CTSB-202ENST00000353047 FMNL3Q8IVF7 1028 aa19.25■□□□□ 0.67
CTSB-202ENST00000353047 ZC3H8Q8N5P1 291 aaKnown RBP eCLIP19.25■□□□□ 0.67
CTSB-202ENST00000353047 CCDC89Q8N998 374 aa19.25■□□□□ 0.67
CTSB-202ENST00000353047 TAS1R2Q8TE23 839 aa19.25■□□□□ 0.67
CTSB-202ENST00000353047 YY1AP1Q9H869 796 aa19.25■□□□□ 0.67
CTSB-202ENST00000353047 TAF1P21675 1872 aa19.24■□□□□ 0.67
CTSB-202ENST00000353047 PITPNM2Q9BZ72 1349 aa19.24■□□□□ 0.67
CTSB-202ENST00000353047 CCDC195A0A1B0GUA6 201 aa19.24■□□□□ 0.67
CTSB-202ENST00000353047 ECHS1P30084 290 aa19.24■□□□□ 0.67
CTSB-202ENST00000353047 HOXD13P35453 343 aa19.24■□□□□ 0.67
CTSB-202ENST00000353047 SWT1Q5T5J6 900 aaKnown RBP19.24■□□□□ 0.67
CTSB-202ENST00000353047 CAPRIN2Q6IMN6 1127 aaKnown RBP19.24■□□□□ 0.67
CTSB-202ENST00000353047 ZNF720Q7Z2F6 126 aa19.24■□□□□ 0.67
CTSB-202ENST00000353047 HES6Q96HZ4 224 aa19.24■□□□□ 0.67
CTSB-202ENST00000353047 UNC45AQ9H3U1 944 aa19.24■□□□□ 0.67
CTSB-202ENST00000353047 ADAM22Q9P0K1 906 aa19.24■□□□□ 0.67
CTSB-202ENST00000353047 PCSK1NQ9UHG2 260 aa19.24■□□□□ 0.67
CTSB-202ENST00000353047 ETS1P14921 441 aa19.24■□□□□ 0.67
CTSB-202ENST00000353047 TNFRSF8P28908 595 aa19.24■□□□□ 0.67
CTSB-202ENST00000353047 TM4SF1P30408 202 aa19.24■□□□□ 0.67
CTSB-202ENST00000353047 LRRC36Q1X8D7 754 aa19.24■□□□□ 0.67
CTSB-202ENST00000353047 RILPQ96NA2 401 aa19.24■□□□□ 0.67
CTSB-202ENST00000353047 WDR11Q9BZH6 1224 aa19.24■□□□□ 0.67
CTSB-202ENST00000353047 RAVER2Q9HCJ3 691 aaKnown RBP19.24■□□□□ 0.67
CTSB-202ENST00000353047 UBN1Q9NPG3 1134 aa19.24■□□□□ 0.67
CTSB-202ENST00000353047 SUGT1Q9Y2Z0 365 aa19.24■□□□□ 0.67
CTSB-202ENST00000353047 LIG4P49917 911 aa19.24■□□□□ 0.67
CTSB-202ENST00000353047 SARNPP82979 210 aaKnown RBP19.24■□□□□ 0.67
CTSB-202ENST00000353047 MTERF2Q49AM1 385 aa19.24■□□□□ 0.67
CTSB-202ENST00000353047 LIN9Q5TKA1 542 aa19.24■□□□□ 0.67
CTSB-202ENST00000353047 FYB2Q5VWT5 728 aa19.24■□□□□ 0.67
CTSB-202ENST00000353047 DNAJC18Q9H819 358 aa19.24■□□□□ 0.67
CTSB-202ENST00000353047 PFASO15067 1338 aa19.23■□□□□ 0.67
CTSB-202ENST00000353047 TXNDC9O14530 226 aa19.23■□□□□ 0.67
CTSB-202ENST00000353047 YWHAGP61981 247 aaKnown RBP eCLIP19.23■□□□□ 0.67
CTSB-202ENST00000353047 DUPD1Q68J44 220 aa19.23■□□□□ 0.67
CTSB-202ENST00000353047 ZBTB33Q86T24 672 aa19.23■□□□□ 0.67
CTSB-202ENST00000353047 MAML1Q92585 1016 aa19.23■□□□□ 0.67
CTSB-202ENST00000353047 PPAN-P2RY11A0A0B4J1V8 794 aaPredicted RBP19.23■□□□□ 0.67
CTSB-202ENST00000353047 ATP2A2P16615 1042 aaKnown RBP19.23■□□□□ 0.67
CTSB-202ENST00000353047 STRN3Q13033 797 aa19.23■□□□□ 0.67
CTSB-202ENST00000353047 PPP2R5DQ14738 602 aa19.23■□□□□ 0.67
CTSB-202ENST00000353047 PREPLQ4J6C6 727 aaPredicted RBP19.23■□□□□ 0.67
CTSB-202ENST00000353047 EEPD1Q7L9B9 569 aa19.23■□□□□ 0.67
CTSB-202ENST00000353047 ANKRD35Q8N283 1001 aa19.23■□□□□ 0.67
CTSB-202ENST00000353047 CCT6BQ92526 530 aa19.23■□□□□ 0.67
CTSB-202ENST00000353047 ZBTB10Q96DT7 871 aa19.23■□□□□ 0.67
CTSB-202ENST00000353047 P2RX7Q99572 595 aaKnown RBP19.23■□□□□ 0.67
CTSB-202ENST00000353047 IMPG2Q9BZV3 1241 aa19.23■□□□□ 0.67
CTSB-202ENST00000353047 SAE1Q9UBE0 346 aaPredicted RBP19.23■□□□□ 0.67
CTSB-202ENST00000353047 SEPT9Q9UHD8 586 aaPredicted RBP19.23■□□□□ 0.67
CTSB-202ENST00000353047 ARL2BPQ9Y2Y0 163 aa19.23■□□□□ 0.67
CTSB-202ENST00000353047 H0YGN5 161 aa19.23■□□□□ 0.67
CTSB-202ENST00000353047 COPS2P61201 443 aa19.23■□□□□ 0.67
CTSB-202ENST00000353047 PDIA2Q13087 525 aaKnown RBP19.23■□□□□ 0.67
CTSB-202ENST00000353047 DMP1Q13316 513 aaPredicted RBP19.23■□□□□ 0.67
CTSB-202ENST00000353047 RAB20Q9NX57 234 aa19.23■□□□□ 0.67
CTSB-202ENST00000353047 NFS1Q9Y697 457 aa19.23■□□□□ 0.67
CTSB-202ENST00000353047 RTN2O75298 545 aa19.22■□□□□ 0.67
CTSB-202ENST00000353047 RASSF9O75901 435 aa19.22■□□□□ 0.67
CTSB-202ENST00000353047 LMNTD2Q8IXW0 634 aa19.22■□□□□ 0.67
CTSB-202ENST00000353047 CCDC33Q8N5R6 958 aa19.22■□□□□ 0.67
CTSB-202ENST00000353047 PCDHB18PQ96TA0 734 aa19.22■□□□□ 0.67
CTSB-202ENST00000353047 NXF1Q9UBU9 619 aaKnown RBP19.22■□□□□ 0.67
CTSB-202ENST00000353047 ZBTB12Q9Y330 459 aaPredicted RBP19.22■□□□□ 0.67
CTSB-202ENST00000353047 BRDTQ58F21 947 aaPredicted RBP19.22■□□□□ 0.67
CTSB-202ENST00000353047 CALN1Q9BXU9 219 aa19.22■□□□□ 0.67
CTSB-202ENST00000353047 GINS2Q9Y248 185 aa19.22■□□□□ 0.67
CTSB-202ENST00000353047 DUOX1Q9NRD9 1551 aa19.22■□□□□ 0.67
CTSB-202ENST00000353047 PPIP5K2O43314 1243 aa19.22■□□□□ 0.67
CTSB-202ENST00000353047 ARSEP51690 589 aa19.22■□□□□ 0.67
CTSB-202ENST00000353047 ORC2Q13416 577 aaPredicted RBP19.22■□□□□ 0.67
CTSB-202ENST00000353047 SNRNP35Q16560 246 aaKnown RBP19.22■□□□□ 0.67
CTSB-202ENST00000353047 AOC3Q16853 763 aa19.22■□□□□ 0.67
CTSB-202ENST00000353047 TMEM179Q6ZVK1 233 aa19.22■□□□□ 0.67
CTSB-202ENST00000353047 ZC3H18Q86VM9 953 aaKnown RBP19.22■□□□□ 0.67
CTSB-202ENST00000353047 CFAP61Q8NHU2 1237 aa19.22■□□□□ 0.67
CTSB-202ENST00000353047 KCNMB3Q9NPA1 279 aa19.22■□□□□ 0.67
CTSB-202ENST00000353047 NAALADL1Q9UQQ1 740 aa19.22■□□□□ 0.67
CTSB-202ENST00000353047 MYH7P12883 1935 aa19.21■□□□□ 0.67
CTSB-202ENST00000353047 EDIL3O43854 480 aa19.21■□□□□ 0.67
CTSB-202ENST00000353047 CNGA2Q16280 664 aa19.21■□□□□ 0.67
CTSB-202ENST00000353047 SCYL2Q6P3W7 929 aa19.21■□□□□ 0.67
Retrieved 100 of 20,778 RNA–protein pairs in 19.9 ms