RNA–Protein interactions for RNA: ENST00000352886.10

SHMT1-202, Transcript of serine hydroxymethyltransferase 1, humanhuman

TSL 2 BASIC

Gene SHMT1, Length 2,437 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHMT1-202ENST00000352886 DHX38Q92620 1227 aaKnown RBP23.42■■□□□ 1.34
SHMT1-202ENST00000352886 NUP85Q9BW27 656 aa23.42■■□□□ 1.34
SHMT1-202ENST00000352886 XPNPEP1Q9NQW7 623 aa23.42■■□□□ 1.34
SHMT1-202ENST00000352886 BRCA1P38398 1863 aaKnown RBP23.42■■□□□ 1.34
SHMT1-202ENST00000352886 BAG6P46379 1132 aa23.42■■□□□ 1.34
SHMT1-202ENST00000352886 DHX9Q08211 1270 aaKnown RBP23.42■■□□□ 1.34
SHMT1-202ENST00000352886 TMEM132BQ14DG7 1078 aa23.42■■□□□ 1.34
SHMT1-202ENST00000352886 EMC10Q5UCC4 262 aa23.42■■□□□ 1.34
SHMT1-202ENST00000352886 GPD1LQ8N335 351 aa23.42■■□□□ 1.34
SHMT1-202ENST00000352886 MCPH1Q8NEM0 835 aa23.42■■□□□ 1.34
SHMT1-202ENST00000352886 ZNF653Q96CK0 615 aa23.42■■□□□ 1.34
SHMT1-202ENST00000352886 BICD1Q96G01 975 aa23.42■■□□□ 1.34
SHMT1-202ENST00000352886 BTBD6Q96KE9 485 aa23.42■■□□□ 1.34
SHMT1-202ENST00000352886 ERP44Q9BS26 406 aa23.42■■□□□ 1.34
SHMT1-202ENST00000352886 ZEB2O60315 1214 aa23.41■■□□□ 1.34
SHMT1-202ENST00000352886 GTF2H1P32780 548 aa23.41■■□□□ 1.34
SHMT1-202ENST00000352886 PEX5P50542 639 aa23.41■■□□□ 1.34
SHMT1-202ENST00000352886 OAZ1P54368 228 aa23.41■■□□□ 1.34
SHMT1-202ENST00000352886 GUCY1A3Q02108 690 aa23.41■■□□□ 1.34
SHMT1-202ENST00000352886 PRKCEQ02156 737 aa23.41■■□□□ 1.34
SHMT1-202ENST00000352886 DUPD1Q68J44 220 aa23.41■■□□□ 1.34
SHMT1-202ENST00000352886 C10orf67Q8IYJ2 551 aa23.41■■□□□ 1.34
SHMT1-202ENST00000352886 TATDN2Q93075 761 aa23.41■■□□□ 1.34
SHMT1-202ENST00000352886 C18orf8Q96DM3 657 aa23.41■■□□□ 1.34
SHMT1-202ENST00000352886 FMO2Q99518 471 aa23.41■■□□□ 1.34
SHMT1-202ENST00000352886 PDLIM7Q9NR12 457 aa23.41■■□□□ 1.34
SHMT1-202ENST00000352886 SLC9A2Q9UBY0 812 aa23.41■■□□□ 1.34
SHMT1-202ENST00000352886 DHX34Q14147 1143 aaKnown RBP23.41■■□□□ 1.34
SHMT1-202ENST00000352886 BRDTQ58F21 947 aaPredicted RBP23.41■■□□□ 1.34
SHMT1-202ENST00000352886 FAM213AQ9BRX8 229 aa23.41■■□□□ 1.34
SHMT1-202ENST00000352886 PI4K2AQ9BTU6 479 aa23.41■■□□□ 1.34
SHMT1-202ENST00000352886 WNT8AQ9H1J5 351 aa23.41■■□□□ 1.34
SHMT1-202ENST00000352886 CYP26B1Q9NR63 512 aa23.41■■□□□ 1.34
SHMT1-202ENST00000352886 CYP39A1Q9NYL5 469 aa23.41■■□□□ 1.34
SHMT1-202ENST00000352886 ZNF112Q9UJU3 913 aa23.41■■□□□ 1.34
SHMT1-202ENST00000352886 ADAMTS5Q9UNA0 930 aa23.41■■□□□ 1.34
SHMT1-202ENST00000352886 FAM187AA6NFU0 413 aa23.4■■□□□ 1.34
SHMT1-202ENST00000352886 CYP1A2P05177 515 aa23.4■■□□□ 1.34
SHMT1-202ENST00000352886 ACTR2P61160 394 aa23.4■■□□□ 1.34
SHMT1-202ENST00000352886 CPNE8Q86YQ8 564 aa23.4■■□□□ 1.34
SHMT1-202ENST00000352886 JAMLQ86YT9 394 aa23.4■■□□□ 1.34
SHMT1-202ENST00000352886 ATP6V0A4Q9HBG4 840 aa23.4■■□□□ 1.34
SHMT1-202ENST00000352886 GTF3C4Q9UKN8 822 aa23.4■■□□□ 1.34
SHMT1-202ENST00000352886 MYO1FO00160 1098 aa23.4■■□□□ 1.34
SHMT1-202ENST00000352886 PHF2O75151 1096 aa23.4■■□□□ 1.34
SHMT1-202ENST00000352886 HSPA6P17066 643 aa23.4■■□□□ 1.34
SHMT1-202ENST00000352886 HPDP32754 393 aaPredicted RBP23.4■■□□□ 1.34
SHMT1-202ENST00000352886 SEL1L2Q5TEA6 688 aa23.4■■□□□ 1.34
SHMT1-202ENST00000352886 TAS1R3Q7RTX0 852 aa23.4■■□□□ 1.34
SHMT1-202ENST00000352886 PRELID2Q8N945 189 aa23.4■■□□□ 1.34
SHMT1-202ENST00000352886 MORC4Q8TE76 937 aa23.4■■□□□ 1.34
SHMT1-202ENST00000352886 DDX1Q92499 740 aaKnown RBP23.4■■□□□ 1.34
SHMT1-202ENST00000352886 CD101Q93033 1021 aa23.4■■□□□ 1.34
SHMT1-202ENST00000352886 FAM84AQ96KN4 292 aa23.4■■□□□ 1.34
SHMT1-202ENST00000352886 A1CFQ9NQ94 594 aaKnown RBP23.4■■□□□ 1.34
SHMT1-202ENST00000352886 FEZ2Q9UHY8 353 aaPredicted RBP23.4■■□□□ 1.34
SHMT1-202ENST00000352886 NFASCO94856 1347 aa23.39■■□□□ 1.34
SHMT1-202ENST00000352886 ANKRD65E5RJM6 399 aa23.39■■□□□ 1.34
SHMT1-202ENST00000352886 SPOPO43791 374 aa23.39■■□□□ 1.34
SHMT1-202ENST00000352886 ZBTB7AO95365 584 aa23.39■■□□□ 1.34
SHMT1-202ENST00000352886 GARTP22102 1010 aa23.39■■□□□ 1.34
SHMT1-202ENST00000352886 CDHR1Q96JP9 859 aa23.39■■□□□ 1.34
SHMT1-202ENST00000352886 IFT74Q96LB3 600 aa23.39■■□□□ 1.34
SHMT1-202ENST00000352886 C12orf42Q96LP6 360 aa23.39■■□□□ 1.34
SHMT1-202ENST00000352886 POLR3FQ9H1D9 316 aaPredicted RBP23.39■■□□□ 1.34
SHMT1-202ENST00000352886 ATP8A1Q9Y2Q0 1164 aa23.39■■□□□ 1.34
SHMT1-202ENST00000352886 KRT5P13647 590 aa23.39■■□□□ 1.33
SHMT1-202ENST00000352886 LSP1P33241 339 aa23.39■■□□□ 1.33
SHMT1-202ENST00000352886 RTP1P59025 263 aa23.39■■□□□ 1.33
SHMT1-202ENST00000352886 RUFY4Q6ZNE9 571 aa23.39■■□□□ 1.33
SHMT1-202ENST00000352886 ZDHHC14Q8IZN3 488 aa23.39■■□□□ 1.33
SHMT1-202ENST00000352886 TEX13BQ9BXU2 312 aa23.39■■□□□ 1.33
SHMT1-202ENST00000352886 ACAD9Q9H845 621 aa23.39■■□□□ 1.33
SHMT1-202ENST00000352886 ZDHHC18Q9NUE0 388 aa23.39■■□□□ 1.33
SHMT1-202ENST00000352886 SLTMQ9NWH9 1034 aaKnown RBP eCLIP23.39■■□□□ 1.33
SHMT1-202ENST00000352886 ARHGAP28Q9P2N2 729 aa23.39■■□□□ 1.33
SHMT1-202ENST00000352886 PPP1R1BQ9UD71 204 aaPredicted RBP23.39■■□□□ 1.33
SHMT1-202ENST00000352886 EBAG9O00559 213 aa23.38■■□□□ 1.33
SHMT1-202ENST00000352886 PYGMP11217 842 aa23.38■■□□□ 1.33
SHMT1-202ENST00000352886 CHRNA3P32297 505 aa23.38■■□□□ 1.33
SHMT1-202ENST00000352886 MTERF2Q49AM1 385 aa23.38■■□□□ 1.33
SHMT1-202ENST00000352886 ABHD15Q6UXT9 468 aa23.38■■□□□ 1.33
SHMT1-202ENST00000352886 MAGOHBQ96A72 148 aaKnown RBP23.38■■□□□ 1.33
SHMT1-202ENST00000352886 RASAL2Q9UJF2 1139 aa23.38■■□□□ 1.33
SHMT1-202ENST00000352886 CTNNA2P26232 953 aa23.38■■□□□ 1.33
SHMT1-202ENST00000352886 UVRAGQ9P2Y5 699 aa23.38■■□□□ 1.33
SHMT1-202ENST00000352886 SNX24Q9Y343 169 aa23.38■■□□□ 1.33
SHMT1-202ENST00000352886 GRIN3BO60391 1043 aa23.37■■□□□ 1.33
SHMT1-202ENST00000352886 PPFIA2O75334 1257 aa23.37■■□□□ 1.33
SHMT1-202ENST00000352886 CALCAP01258 141 aa23.37■■□□□ 1.33
SHMT1-202ENST00000352886 ACAD10Q6JQN1 1059 aa23.37■■□□□ 1.33
SHMT1-202ENST00000352886 BCCIPQ9P287 314 aaKnown RBP eCLIP23.37■■□□□ 1.33
SHMT1-202ENST00000352886 NDUFAB1O14561 156 aa23.37■■□□□ 1.33
SHMT1-202ENST00000352886 KIAA0391O15091 583 aaKnown RBP23.37■■□□□ 1.33
SHMT1-202ENST00000352886 ERLIN2O94905 339 aa23.37■■□□□ 1.33
SHMT1-202ENST00000352886 GGPS1O95749 300 aa23.37■■□□□ 1.33
SHMT1-202ENST00000352886 MDH1P40925 334 aaKnown RBP23.37■■□□□ 1.33
SHMT1-202ENST00000352886 PTGIRP43119 386 aa23.37■■□□□ 1.33
SHMT1-202ENST00000352886 LIG4P49917 911 aa23.37■■□□□ 1.33
SHMT1-202ENST00000352886 GCNT1Q02742 428 aa23.37■■□□□ 1.33
Retrieved 100 of 20,778 RNA–protein pairs in 34 ms