RNA–Protein interactions for RNA: ENST00000351487.5

UPF3A-201, Transcript of UPF3A, regulator of nonsense mediated mRNA decay, humanhuman

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Gene UPF3A, Length 2,235 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UPF3A-201ENST00000351487 POP1Q99575 1024 aaKnown RBP23.79■■□□□ 1.4
UPF3A-201ENST00000351487 NUP85Q9BW27 656 aa23.79■■□□□ 1.4
UPF3A-201ENST00000351487 TOPORSQ9NS56 1045 aaPredicted RBP23.79■■□□□ 1.4
UPF3A-201ENST00000351487 ADAMTS5Q9UNA0 930 aa23.79■■□□□ 1.4
UPF3A-201ENST00000351487 LOC285556D6RIA3 1793 aa23.78■■□□□ 1.4
UPF3A-201ENST00000351487 TMEM110-MUSTN1A8MSY1 372 aa23.78■■□□□ 1.4
UPF3A-201ENST00000351487 ATMINO43313 823 aaPredicted RBP23.78■■□□□ 1.4
UPF3A-201ENST00000351487 RGS20O76081 388 aa23.78■■□□□ 1.4
UPF3A-201ENST00000351487 PTGIRP43119 386 aa23.78■■□□□ 1.4
UPF3A-201ENST00000351487 SLC20A2Q08357 652 aa23.78■■□□□ 1.4
UPF3A-201ENST00000351487 SV2AQ7L0J3 742 aa23.78■■□□□ 1.4
UPF3A-201ENST00000351487 GPD1LQ8N335 351 aa23.78■■□□□ 1.4
UPF3A-201ENST00000351487 NSUN6Q8TEA1 469 aaKnown RBP23.78■■□□□ 1.4
UPF3A-201ENST00000351487 C12orf42Q96LP6 360 aa23.78■■□□□ 1.4
UPF3A-201ENST00000351487 TRIM31Q9BZY9 425 aa23.78■■□□□ 1.4
UPF3A-201ENST00000351487 AS3MTQ9HBK9 375 aa23.78■■□□□ 1.4
UPF3A-201ENST00000351487 UTP3Q9NQZ2 479 aaKnown RBP eCLIP23.78■■□□□ 1.45e-6■■■■■ 31.1
UPF3A-201ENST00000351487 MYH9P35579 1960 aaKnown RBP23.78■■□□□ 1.4
UPF3A-201ENST00000351487 NDUFAB1O14561 156 aa23.78■■□□□ 1.4
UPF3A-201ENST00000351487 KIAA0391O15091 583 aaKnown RBP23.78■■□□□ 1.4
UPF3A-201ENST00000351487 PSAPP07602 524 aa23.78■■□□□ 1.4
UPF3A-201ENST00000351487 MAGEA9P43362 315 aa23.78■■□□□ 1.4
UPF3A-201ENST00000351487 GCNT1Q02742 428 aa23.78■■□□□ 1.4
UPF3A-201ENST00000351487 PTGISQ16647 500 aa23.78■■□□□ 1.4
UPF3A-201ENST00000351487 CYP1B1Q16678 543 aa23.78■■□□□ 1.4
UPF3A-201ENST00000351487 DCAF15Q66K64 600 aa23.78■■□□□ 1.4
UPF3A-201ENST00000351487 SNRNP48Q6IEG0 339 aaKnown RBP23.78■■□□□ 1.4
UPF3A-201ENST00000351487 ENOSF1Q7L5Y1 443 aa23.78■■□□□ 1.4
UPF3A-201ENST00000351487 ZNF653Q96CK0 615 aa23.78■■□□□ 1.4
UPF3A-201ENST00000351487 XPNPEP1Q9NQW7 623 aa23.78■■□□□ 1.4
UPF3A-201ENST00000351487 ZNF112Q9UJU3 913 aa23.78■■□□□ 1.4
UPF3A-201ENST00000351487 ZNF214Q9UL59 606 aaPredicted RBP23.78■■□□□ 1.4
UPF3A-201ENST00000351487 ZC3H11AO75152 810 aaKnown RBP eCLIP23.77■■□□□ 1.4
UPF3A-201ENST00000351487 ERLIN2O94905 339 aa23.77■■□□□ 1.4
UPF3A-201ENST00000351487 GBP1P32455 592 aa23.77■■□□□ 1.4
UPF3A-201ENST00000351487 EIF3BP55884 814 aaKnown RBP23.77■■□□□ 1.4
UPF3A-201ENST00000351487 TGFB2P61812 414 aa23.77■■□□□ 1.4
UPF3A-201ENST00000351487 KCTD19Q17RG1 926 aaPredicted RBP23.77■■□□□ 1.4
UPF3A-201ENST00000351487 NBPF12Q5TAG4 269 aaPredicted RBP23.77■■□□□ 1.4
UPF3A-201ENST00000351487 C18orf8Q96DM3 657 aa23.77■■□□□ 1.4
UPF3A-201ENST00000351487 ARHGAP28Q9P2N2 729 aa23.77■■□□□ 1.4
UPF3A-201ENST00000351487 SLC12A6Q9UHW9 1150 aa23.77■■□□□ 1.4
UPF3A-201ENST00000351487 HACL1Q9UJ83 578 aa23.77■■□□□ 1.4
UPF3A-201ENST00000351487 PCDHA3Q9Y5H8 950 aa23.77■■□□□ 1.4
UPF3A-201ENST00000351487 HNRNPDLO14979 420 aaKnown RBP23.76■■□□□ 1.39
UPF3A-201ENST00000351487 GRIN3BO60391 1043 aa23.76■■□□□ 1.39
UPF3A-201ENST00000351487 ABCD1P33897 745 aa23.76■■□□□ 1.39
UPF3A-201ENST00000351487 SOX10P56693 466 aa23.76■■□□□ 1.39
UPF3A-201ENST00000351487 ZDHHC14Q8IZN3 488 aa23.76■■□□□ 1.39
UPF3A-201ENST00000351487 ZNF280CQ8ND82 737 aa23.76■■□□□ 1.39
UPF3A-201ENST00000351487 CDHR1Q96JP9 859 aa23.76■■□□□ 1.39
UPF3A-201ENST00000351487 JPH1Q9HDC5 661 aaPredicted RBP23.76■■□□□ 1.39
UPF3A-201ENST00000351487 CHORDC1Q9UHD1 332 aaPredicted RBP23.76■■□□□ 1.39
UPF3A-201ENST00000351487 ATXN2Q99700 1313 aaKnown RBP23.76■■□□□ 1.39
UPF3A-201ENST00000351487 LCTP09848 1927 aa23.76■■□□□ 1.39
UPF3A-201ENST00000351487 DSG3P32926 999 aa23.76■■□□□ 1.39
UPF3A-201ENST00000351487 SKIDA1Q1XH10 827 aa23.76■■□□□ 1.39
UPF3A-201ENST00000351487 ZDHHC24Q6UX98 284 aa23.76■■□□□ 1.39
UPF3A-201ENST00000351487 FAM81BQ96LP2 452 aa23.76■■□□□ 1.39
UPF3A-201ENST00000351487 PAGR1Q9BTK6 254 aa23.76■■□□□ 1.39
UPF3A-201ENST00000351487 CENPHQ9H3R5 247 aa23.76■■□□□ 1.39
UPF3A-201ENST00000351487 RABEP2Q9H5N1 569 aa23.76■■□□□ 1.39
UPF3A-201ENST00000351487 SIP14410 1827 aa23.76■■□□□ 1.39
UPF3A-201ENST00000351487 H0YCG3 227 aa23.75■■□□□ 1.39
UPF3A-201ENST00000351487 PODXLO00592 558 aa23.75■■□□□ 1.39
UPF3A-201ENST00000351487 ACAD10Q6JQN1 1059 aa23.75■■□□□ 1.39
UPF3A-201ENST00000351487 C15orf39Q6ZRI6 1047 aa23.75■■□□□ 1.39
UPF3A-201ENST00000351487 TAS1R3Q7RTX0 852 aa23.75■■□□□ 1.39
UPF3A-201ENST00000351487 MICALL2Q8IY33 904 aa23.75■■□□□ 1.39
UPF3A-201ENST00000351487 KCNN1Q92952 543 aa23.75■■□□□ 1.39
UPF3A-201ENST00000351487 RUNDC3BQ96NL0 473 aa23.75■■□□□ 1.39
UPF3A-201ENST00000351487 ATP6V0A4Q9HBG4 840 aa23.75■■□□□ 1.39
UPF3A-201ENST00000351487 CYP26B1Q9NR63 512 aa23.75■■□□□ 1.39
UPF3A-201ENST00000351487 NFKBIEO00221 500 aa23.75■■□□□ 1.39
UPF3A-201ENST00000351487 ATP2A1O14983 1001 aa23.75■■□□□ 1.39
UPF3A-201ENST00000351487 STAM2O75886 525 aa23.75■■□□□ 1.39
UPF3A-201ENST00000351487 NUDT17P0C025 328 aa23.75■■□□□ 1.39
UPF3A-201ENST00000351487 PYGMP11217 842 aa23.75■■□□□ 1.39
UPF3A-201ENST00000351487 PTPRAP18433 802 aa23.75■■□□□ 1.39
UPF3A-201ENST00000351487 HPDP32754 393 aaPredicted RBP23.75■■□□□ 1.39
UPF3A-201ENST00000351487 PRKCEQ02156 737 aa23.75■■□□□ 1.39
UPF3A-201ENST00000351487 DALRD3Q5D0E6 543 aaKnown RBP23.75■■□□□ 1.39
UPF3A-201ENST00000351487 SWSAP1Q6NVH7 229 aa23.75■■□□□ 1.39
UPF3A-201ENST00000351487 B4GALNT4Q76KP1 1039 aa23.75■■□□□ 1.39
UPF3A-201ENST00000351487 SAMD7Q7Z3H4 446 aa23.75■■□□□ 1.39
UPF3A-201ENST00000351487 SLC13A5Q86YT5 568 aaPredicted RBP23.75■■□□□ 1.39
UPF3A-201ENST00000351487 CCDC60Q8IWA6 550 aaPredicted RBP23.75■■□□□ 1.39
UPF3A-201ENST00000351487 MAGOHBQ96A72 148 aaKnown RBP23.75■■□□□ 1.39
UPF3A-201ENST00000351487 GRHL1Q9NZI5 618 aa23.75■■□□□ 1.39
UPF3A-201ENST00000351487 SLC9A2Q9UBY0 812 aa23.75■■□□□ 1.39
UPF3A-201ENST00000351487 ATP8A1Q9Y2Q0 1164 aa23.75■■□□□ 1.39
UPF3A-201ENST00000351487 SPOPO43791 374 aa23.74■■□□□ 1.39
UPF3A-201ENST00000351487 CLDN10P78369 228 aa23.74■■□□□ 1.39
UPF3A-201ENST00000351487 TTC27Q6P3X3 843 aa23.74■■□□□ 1.39
UPF3A-201ENST00000351487 DHX38Q92620 1227 aaKnown RBP23.74■■□□□ 1.39
UPF3A-201ENST00000351487 TATDN2Q93075 761 aa23.74■■□□□ 1.39
UPF3A-201ENST00000351487 EPB41L4BQ9H329 900 aa23.74■■□□□ 1.39
UPF3A-201ENST00000351487 SEPT9Q9UHD8 586 aaPredicted RBP23.74■■□□□ 1.39
UPF3A-201ENST00000351487 FAM169AQ9Y6X4 670 aa23.74■■□□□ 1.39
UPF3A-201ENST00000351487 DLATP10515 647 aaKnown RBP23.74■■□□□ 1.39
Retrieved 100 of 20,778 RNA–protein pairs in 17.2 ms