RNA–Protein interactions for RNA: ENST00000351288.10

SMPD4-201, Transcript of sphingomyelin phosphodiesterase 4, humanhuman

TSL 2 BASIC

Gene SMPD4, Length 3,661 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMPD4-201ENST00000351288 FBXO40Q9UH90 709 aa11.16□□□□□ -0.62
SMPD4-201ENST00000351288 BZW2Q9Y6E2 419 aaKnown RBP11.16□□□□□ -0.62
SMPD4-201ENST00000351288 SIPA1L1O43166 1804 aa11.16□□□□□ -0.62
SMPD4-201ENST00000351288 TCRBV7S2A1N4TA0A589 114 aa11.16□□□□□ -0.62
SMPD4-201ENST00000351288 C19orf81C9J6K1 198 aa11.16□□□□□ -0.62
SMPD4-201ENST00000351288 TULP2O00295 520 aa11.16□□□□□ -0.62
SMPD4-201ENST00000351288 PPFIA4O75335 1185 aa11.16□□□□□ -0.62
SMPD4-201ENST00000351288 PTGER2P43116 358 aa11.16□□□□□ -0.62
SMPD4-201ENST00000351288 PLTPP55058 493 aa11.16□□□□□ -0.62
SMPD4-201ENST00000351288 ARMC9Q7Z3E5 817 aa11.16□□□□□ -0.62
SMPD4-201ENST00000351288 MCPH1Q8NEM0 835 aa11.16□□□□□ -0.62
SMPD4-201ENST00000351288 MDM1Q8TC05 714 aa11.16□□□□□ -0.62
SMPD4-201ENST00000351288 TATDN2Q93075 761 aa11.16□□□□□ -0.62
SMPD4-201ENST00000351288 TBX20Q9UMR3 447 aa11.16□□□□□ -0.62
SMPD4-201ENST00000351288 ZNF831Q5JPB2 1677 aa11.16□□□□□ -0.62
SMPD4-201ENST00000351288 NSFP46459 744 aaKnown RBP11.16□□□□□ -0.62
SMPD4-201ENST00000351288 JAM2P57087 298 aa11.16□□□□□ -0.62
SMPD4-201ENST00000351288 UAP1Q16222 522 aaPredicted RBP11.16□□□□□ -0.62
SMPD4-201ENST00000351288 SLC47A2Q86VL8 602 aa11.16□□□□□ -0.62
SMPD4-201ENST00000351288 NLRP7Q8WX94 980 aa11.16□□□□□ -0.62
SMPD4-201ENST00000351288 C18orf8Q96DM3 657 aa11.16□□□□□ -0.62
SMPD4-201ENST00000351288 MMP19Q99542 508 aa11.16□□□□□ -0.62
SMPD4-201ENST00000351288 GPR88Q9GZN0 384 aa11.16□□□□□ -0.62
SMPD4-201ENST00000351288 TAF1DQ9H5J8 278 aaPredicted RBP11.16□□□□□ -0.62
SMPD4-201ENST00000351288 TSKSQ9UJT2 592 aa11.16□□□□□ -0.62
SMPD4-201ENST00000351288 FOXO6A8MYZ6 492 aa11.15□□□□□ -0.62
SMPD4-201ENST00000351288 E7EVH7 732 aa11.15□□□□□ -0.62
SMPD4-201ENST00000351288 DYNLT1P63172 113 aa11.15□□□□□ -0.62
SMPD4-201ENST00000351288 FAM160B1Q5W0V3 765 aa11.15□□□□□ -0.62
SMPD4-201ENST00000351288 KRT39Q6A163 491 aa11.15□□□□□ -0.62
SMPD4-201ENST00000351288 ANO5Q75V66 913 aa11.15□□□□□ -0.62
SMPD4-201ENST00000351288 IQCKQ8N0W5 287 aa11.15□□□□□ -0.62
SMPD4-201ENST00000351288 BORCS6Q96GS4 357 aa11.15□□□□□ -0.62
SMPD4-201ENST00000351288 BUD13Q9BRD0 619 aaKnown RBP eCLIP11.15□□□□□ -0.621e-6■■■□□ 15.9
SMPD4-201ENST00000351288 CYP26B1Q9NR63 512 aa11.15□□□□□ -0.62
SMPD4-201ENST00000351288 GRIN2DO15399 1336 aa11.15□□□□□ -0.62
SMPD4-201ENST00000351288 FOCADQ5VW36 1801 aa11.15□□□□□ -0.62
SMPD4-201ENST00000351288 PIK3CDO00329 1044 aa11.15□□□□□ -0.62
SMPD4-201ENST00000351288 NR1D1P20393 614 aa11.15□□□□□ -0.62
SMPD4-201ENST00000351288 MAPK7Q13164 816 aa11.15□□□□□ -0.62
SMPD4-201ENST00000351288 RNF187Q5TA31 235 aaPredicted RBP11.15□□□□□ -0.62
SMPD4-201ENST00000351288 FKBP1CQ5VVH2 108 aa11.15□□□□□ -0.62
SMPD4-201ENST00000351288 UBL4BQ8N7F7 174 aa11.15□□□□□ -0.62
SMPD4-201ENST00000351288 FBXL13Q8NEE6 735 aa11.15□□□□□ -0.62
SMPD4-201ENST00000351288 KLRG1Q96E93 195 aa11.15□□□□□ -0.62
SMPD4-201ENST00000351288 TRIM7Q9C029 511 aa11.15□□□□□ -0.62
SMPD4-201ENST00000351288 OLFML3Q9NRN5 406 aa11.15□□□□□ -0.62
SMPD4-201ENST00000351288 CYP39A1Q9NYL5 469 aa11.15□□□□□ -0.62
SMPD4-201ENST00000351288 CNOT8Q9UFF9 292 aaKnown RBP11.15□□□□□ -0.62
SMPD4-201ENST00000351288 ANAPC7Q9UJX3 599 aa11.15□□□□□ -0.62
SMPD4-201ENST00000351288 NOVA2Q9UNW9 492 aaKnown RBP11.15□□□□□ -0.62
SMPD4-201ENST00000351288 SPDYE16A6NNV3 312 aaPredicted RBP11.15□□□□□ -0.62
SMPD4-201ENST00000351288 ZNF536O15090 1300 aa11.15□□□□□ -0.62
SMPD4-201ENST00000351288 WEE2P0C1S8 567 aa11.15□□□□□ -0.62
SMPD4-201ENST00000351288 MAPK4P31152 587 aa11.15□□□□□ -0.62
SMPD4-201ENST00000351288 HIRAP54198 1017 aaPredicted RBP11.15□□□□□ -0.62
SMPD4-201ENST00000351288 OPTNQ96CV9 577 aa11.15□□□□□ -0.62
SMPD4-201ENST00000351288 SELENOSQ9BQE4 189 aa11.15□□□□□ -0.62
SMPD4-201ENST00000351288 UTP11Q9Y3A2 253 aaKnown RBP11.15□□□□□ -0.62
SMPD4-201ENST00000351288 SYNJ2BP-COX16A0A087WUM0 186 aa11.14□□□□□ -0.63
SMPD4-201ENST00000351288 GOLGA8KD6RF30 607 aa11.14□□□□□ -0.63
SMPD4-201ENST00000351288 MYO1FO00160 1098 aa11.14□□□□□ -0.63
SMPD4-201ENST00000351288 EBAG9O00559 213 aa11.14□□□□□ -0.63
SMPD4-201ENST00000351288 NPM3O75607 178 aaKnown RBP11.14□□□□□ -0.63
SMPD4-201ENST00000351288 DGAT1O75907 488 aa11.14□□□□□ -0.63
SMPD4-201ENST00000351288 ECHS1P30084 290 aa11.14□□□□□ -0.63
SMPD4-201ENST00000351288 CETN2P41208 172 aa11.14□□□□□ -0.63
SMPD4-201ENST00000351288 LACTBP83111 547 aaPredicted RBP11.14□□□□□ -0.63
SMPD4-201ENST00000351288 KRT71Q3SY84 523 aa11.14□□□□□ -0.63
SMPD4-201ENST00000351288 ZNF568Q3ZCX4 644 aa11.14□□□□□ -0.63
SMPD4-201ENST00000351288 XKR3Q5GH77 459 aa11.14□□□□□ -0.63
SMPD4-201ENST00000351288 HP1BP3Q5SSJ5 553 aaPredicted RBP11.14□□□□□ -0.63
SMPD4-201ENST00000351288 VSIG10LQ86VR7 867 aa11.14□□□□□ -0.63
SMPD4-201ENST00000351288 C7orf31Q8N865 590 aa11.14□□□□□ -0.63
SMPD4-201ENST00000351288 CCDC26Q8TAB7 109 aa11.14□□□□□ -0.63
SMPD4-201ENST00000351288 NEK9Q8TD19 979 aa11.14□□□□□ -0.63
SMPD4-201ENST00000351288 DYDC1Q8WWB3 177 aa11.14□□□□□ -0.63
SMPD4-201ENST00000351288 STK33Q9BYT3 514 aa11.14□□□□□ -0.63
SMPD4-201ENST00000351288 COX16Q9P0S2 106 aa11.14□□□□□ -0.63
SMPD4-201ENST00000351288 FAM169AQ9Y6X4 670 aa11.14□□□□□ -0.63
SMPD4-201ENST00000351288 COL11A2P13942 1736 aaPredicted RBP11.14□□□□□ -0.63
SMPD4-201ENST00000351288 PHF20L1A8MW92 1017 aa11.14□□□□□ -0.63
SMPD4-201ENST00000351288 EIF3HO15372 352 aaKnown RBP eCLIP11.14□□□□□ -0.634e-7■□□□□ 8.8
SMPD4-201ENST00000351288 ADRB2P07550 413 aa11.14□□□□□ -0.63
SMPD4-201ENST00000351288 MMEP08473 750 aa11.14□□□□□ -0.63
SMPD4-201ENST00000351288 OSBPP22059 807 aa11.14□□□□□ -0.63
SMPD4-201ENST00000351288 SYCE1Q8N0S2 351 aa11.14□□□□□ -0.63
SMPD4-201ENST00000351288 ACSF2Q96CM8 615 aaPredicted RBP11.14□□□□□ -0.63
SMPD4-201ENST00000351288 PAIP2Q9BPZ3 127 aaKnown RBP11.14□□□□□ -0.63
SMPD4-201ENST00000351288 SPATC1LQ9H0A9 340 aa11.14□□□□□ -0.63
SMPD4-201ENST00000351288 ALG6Q9Y672 507 aa11.14□□□□□ -0.63
SMPD4-201ENST00000351288 ZNF862O60290 1169 aa11.14□□□□□ -0.63
SMPD4-201ENST00000351288 SHBGP04278 402 aa11.14□□□□□ -0.63
SMPD4-201ENST00000351288 MAPK6Q16659 721 aa11.14□□□□□ -0.63
SMPD4-201ENST00000351288 CCDC38Q502W7 563 aa11.14□□□□□ -0.63
SMPD4-201ENST00000351288 FBXW10Q5XX13 1052 aa11.14□□□□□ -0.63
SMPD4-201ENST00000351288 ZNF572Q7Z3I7 529 aaPredicted RBP11.14□□□□□ -0.63
SMPD4-201ENST00000351288 PACS2Q86VP3 889 aa11.14□□□□□ -0.63
SMPD4-201ENST00000351288 ZC3H3Q8IXZ2 948 aaKnown RBP11.14□□□□□ -0.63
SMPD4-201ENST00000351288 GPD1LQ8N335 351 aa11.14□□□□□ -0.63
Retrieved 100 of 20,778 RNA–protein pairs in 32.2 ms