RNA–Protein interactions for RNA: ENST00000350148.9

SMAD9-201, Transcript of SMAD family member 9, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene SMAD9, Length 5,447 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMAD9-201ENST00000350148 FAM187AA6NFU0 413 aa12.97□□□□□ -0.33
SMAD9-201ENST00000350148 GOLGA8SH3BPF8 625 aa12.97□□□□□ -0.33
SMAD9-201ENST00000350148 OGTO15294 1046 aa12.97□□□□□ -0.33
SMAD9-201ENST00000350148 NPTX2P47972 431 aa12.97□□□□□ -0.33
SMAD9-201ENST00000350148 EIF3BP55884 814 aaKnown RBP12.97□□□□□ -0.33
SMAD9-201ENST00000350148 NCOA4Q13772 614 aa12.97□□□□□ -0.33
SMAD9-201ENST00000350148 LRRC23Q53EV4 343 aaPredicted RBP12.97□□□□□ -0.33
SMAD9-201ENST00000350148 HAS1Q92839 578 aa12.97□□□□□ -0.33
SMAD9-201ENST00000350148 MTMR8Q96EF0 704 aa12.97□□□□□ -0.33
SMAD9-201ENST00000350148 TNIP3Q96KP6 325 aa12.97□□□□□ -0.33
SMAD9-201ENST00000350148 IRAK4Q9NWZ3 460 aa12.97□□□□□ -0.33
SMAD9-201ENST00000350148 N4BP2Q86UW6 1770 aaPredicted RBP12.97□□□□□ -0.33
SMAD9-201ENST00000350148 STAMBPO95630 424 aa12.97□□□□□ -0.33
SMAD9-201ENST00000350148 SCARA5Q6ZMJ2 495 aa12.97□□□□□ -0.33
SMAD9-201ENST00000350148 TRIM59Q8IWR1 403 aa12.97□□□□□ -0.33
SMAD9-201ENST00000350148 P2RX7Q99572 595 aaKnown RBP12.97□□□□□ -0.33
SMAD9-201ENST00000350148 PDE11AQ9HCR9 933 aa12.97□□□□□ -0.33
SMAD9-201ENST00000350148 POLD4Q9HCU8 107 aa12.97□□□□□ -0.33
SMAD9-201ENST00000350148 RGS16O15492 202 aaPredicted RBP12.96□□□□□ -0.33
SMAD9-201ENST00000350148 KIF1CO43896 1103 aaKnown RBP12.96□□□□□ -0.33
SMAD9-201ENST00000350148 SKIP12755 728 aa12.96□□□□□ -0.33
SMAD9-201ENST00000350148 PSMA2P25787 234 aa12.96□□□□□ -0.33
SMAD9-201ENST00000350148 TMEM132DQ14C87 1099 aa12.96□□□□□ -0.33
SMAD9-201ENST00000350148 SPATA20Q8TB22 786 aa12.96□□□□□ -0.33
SMAD9-201ENST00000350148 SOCS4Q8WXH5 440 aa12.96□□□□□ -0.33
SMAD9-201ENST00000350148 KIF12Q96FN5 646 aa12.96□□□□□ -0.33
SMAD9-201ENST00000350148 BUD13Q9BRD0 619 aaKnown RBP eCLIP12.96□□□□□ -0.33
SMAD9-201ENST00000350148 SCAF8Q9UPN6 1271 aaKnown RBP12.96□□□□□ -0.33
SMAD9-201ENST00000350148 A0A087X0B3 334 aa12.96□□□□□ -0.33
SMAD9-201ENST00000350148 KIAA0895Q8NCT3 520 aa12.96□□□□□ -0.33
SMAD9-201ENST00000350148 C12orf42Q96LP6 360 aa12.96□□□□□ -0.33
SMAD9-201ENST00000350148 NUP85Q9BW27 656 aa12.96□□□□□ -0.33
SMAD9-201ENST00000350148 A1CFQ9NQ94 594 aaKnown RBP12.96□□□□□ -0.33
SMAD9-201ENST00000350148 ADM5C9JUS6 153 aa12.96□□□□□ -0.33
SMAD9-201ENST00000350148 PRPSAP1Q14558 356 aa12.96□□□□□ -0.33
SMAD9-201ENST00000350148 PALM2Q8IXS6 379 aa12.96□□□□□ -0.33
SMAD9-201ENST00000350148 PDHXO00330 501 aa12.96□□□□□ -0.34
SMAD9-201ENST00000350148 ZRANB2O95218 330 aaKnown RBP eCLIP12.96□□□□□ -0.34
SMAD9-201ENST00000350148 RARBP10826 455 aa12.96□□□□□ -0.34
SMAD9-201ENST00000350148 PNPLA4P41247 253 aa12.96□□□□□ -0.34
SMAD9-201ENST00000350148 DR1Q01658 176 aa12.96□□□□□ -0.34
SMAD9-201ENST00000350148 NFX1Q12986 1120 aaKnown RBP12.96□□□□□ -0.34
SMAD9-201ENST00000350148 RHOT1Q8IXI2 618 aa12.96□□□□□ -0.34
SMAD9-201ENST00000350148 ETNPPLQ8TBG4 499 aa12.96□□□□□ -0.34
SMAD9-201ENST00000350148 PARD6BQ9BYG5 372 aa12.96□□□□□ -0.34
SMAD9-201ENST00000350148 EPB41L5Q9HCM4 733 aa12.96□□□□□ -0.34
SMAD9-201ENST00000350148 AGPAT5Q9NUQ2 364 aa12.96□□□□□ -0.34
SMAD9-201ENST00000350148 EVI5O60447 810 aa12.95□□□□□ -0.34
SMAD9-201ENST00000350148 TBC1D8O95759 1140 aa12.95□□□□□ -0.34
SMAD9-201ENST00000350148 IFNB1P01574 187 aa12.95□□□□□ -0.34
SMAD9-201ENST00000350148 CHRNA3P32297 505 aa12.95□□□□□ -0.34
SMAD9-201ENST00000350148 TSPY1Q01534 308 aa12.95□□□□□ -0.34
SMAD9-201ENST00000350148 PDE1CQ14123 709 aaPredicted RBP12.95□□□□□ -0.34
SMAD9-201ENST00000350148 TTC19Q6DKK2 380 aaPredicted RBP12.95□□□□□ -0.34
SMAD9-201ENST00000350148 NOTUMQ6P988 496 aa12.95□□□□□ -0.34
SMAD9-201ENST00000350148 KCTD6Q8NC69 237 aa12.95□□□□□ -0.34
SMAD9-201ENST00000350148 FHOD1Q9Y613 1164 aa12.95□□□□□ -0.34
SMAD9-201ENST00000350148 NHSQ6T4R5 1651 aa12.95□□□□□ -0.34
SMAD9-201ENST00000350148 H7C0C1 242 aa12.95□□□□□ -0.34
SMAD9-201ENST00000350148 HLA-DRAP01903 254 aa12.95□□□□□ -0.34
SMAD9-201ENST00000350148 ATP5OP48047 213 aa12.95□□□□□ -0.34
SMAD9-201ENST00000350148 GLYCTKQ8IVS8 523 aa12.95□□□□□ -0.34
SMAD9-201ENST00000350148 RAET1EQ8TD07 263 aa12.95□□□□□ -0.34
SMAD9-201ENST00000350148 PPP1R12CQ9BZL4 782 aa12.95□□□□□ -0.34
SMAD9-201ENST00000350148 DPH5Q9H2P9 285 aa12.95□□□□□ -0.34
SMAD9-201ENST00000350148 CYP39A1Q9NYL5 469 aa12.95□□□□□ -0.34
SMAD9-201ENST00000350148 COMMD10Q9Y6G5 202 aa12.95□□□□□ -0.34
SMAD9-201ENST00000350148 SMIM23A6NLE4 172 aa12.95□□□□□ -0.34
SMAD9-201ENST00000350148 CTIFO43310 598 aaKnown RBP12.95□□□□□ -0.34
SMAD9-201ENST00000350148 TOM1L1O75674 476 aa12.95□□□□□ -0.34
SMAD9-201ENST00000350148 CYP2C9P11712 490 aa12.95□□□□□ -0.34
SMAD9-201ENST00000350148 C2orf54Q08AI8 447 aa12.95□□□□□ -0.34
SMAD9-201ENST00000350148 MUM1L1Q5H9M0 696 aa12.95□□□□□ -0.34
SMAD9-201ENST00000350148 CHP1Q99653 195 aa12.95□□□□□ -0.34
SMAD9-201ENST00000350148 NIF3L1Q9GZT8 377 aa12.95□□□□□ -0.34
SMAD9-201ENST00000350148 SNX12Q9UMY4 172 aa12.95□□□□□ -0.34
SMAD9-201ENST00000350148 MYH3P11055 1940 aa12.95□□□□□ -0.34
SMAD9-201ENST00000350148 RTP1P59025 263 aa12.95□□□□□ -0.34
SMAD9-201ENST00000350148 ERVK-9P63128 1117 aa12.95□□□□□ -0.34
SMAD9-201ENST00000350148 ERVK-24P63145 666 aa12.95□□□□□ -0.34
SMAD9-201ENST00000350148 RAD9BQ6WBX8 426 aa12.95□□□□□ -0.34
SMAD9-201ENST00000350148 BBS5Q8N3I7 341 aa12.95□□□□□ -0.34
SMAD9-201ENST00000350148 PPFIBP2Q8ND30 876 aa12.95□□□□□ -0.34
SMAD9-201ENST00000350148 FAM149B1Q96BN6 582 aa12.95□□□□□ -0.34
SMAD9-201ENST00000350148 PCDHAC2Q9Y5I4 1007 aa12.95□□□□□ -0.34
SMAD9-201ENST00000350148 SRGAP2BP0DMP2 458 aa12.95□□□□□ -0.34
SMAD9-201ENST00000350148 Q3C1V9 767 aa12.95□□□□□ -0.34
SMAD9-201ENST00000350148 MPZL3Q6UWV2 235 aa12.95□□□□□ -0.34
SMAD9-201ENST00000350148 ZPBP2Q6X784 338 aa12.95□□□□□ -0.34
SMAD9-201ENST00000350148 SYDE1Q6ZW31 735 aaPredicted RBP12.95□□□□□ -0.34
SMAD9-201ENST00000350148 SH3BP5LQ7L8J4 393 aa12.95□□□□□ -0.34
SMAD9-201ENST00000350148 PCGF5Q86SE9 256 aa12.95□□□□□ -0.34
SMAD9-201ENST00000350148 CGRRF1Q99675 332 aa12.95□□□□□ -0.34
SMAD9-201ENST00000350148 ABHD16BQ9H3Z7 469 aa12.95□□□□□ -0.34
SMAD9-201ENST00000350148 VPS37BQ9H9H4 285 aa12.95□□□□□ -0.34
SMAD9-201ENST00000350148 KIAA1257Q9ULG3 409 aa12.95□□□□□ -0.34
SMAD9-201ENST00000350148 ZC3H4Q9UPT8 1303 aaKnown RBP12.94□□□□□ -0.34
SMAD9-201ENST00000350148 GUCY2FP51841 1108 aa12.94□□□□□ -0.34
SMAD9-201ENST00000350148 PPP1R16BQ96T49 567 aa12.94□□□□□ -0.34
SMAD9-201ENST00000350148 KCND1Q9NSA2 647 aa12.94□□□□□ -0.34
Retrieved 100 of 20,778 RNA–protein pairs in 23.6 ms