RNA–Protein interactions for RNA: ENST00000349893.8

COPE-202, Transcript of coatomer protein complex subunit epsilon, humanhuman

TSL 2 BASIC

Gene COPE, Length 948 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COPE-202ENST00000349893 DKC1O60832 514 aaKnown RBP eCLIP17.52■□□□□ 0.4
COPE-202ENST00000349893 TARSP26639 723 aaKnown RBP17.52■□□□□ 0.4
COPE-202ENST00000349893 GRIK3Q13003 919 aa17.52■□□□□ 0.4
COPE-202ENST00000349893 AMHR2Q16671 573 aa17.52■□□□□ 0.4
COPE-202ENST00000349893 PRSS55Q6UWB4 352 aaPredicted RBP17.52■□□□□ 0.4
COPE-202ENST00000349893 ZNF687Q8N1G0 1237 aa17.52■□□□□ 0.4
COPE-202ENST00000349893 PIK3R5Q8WYR1 880 aa17.52■□□□□ 0.4
COPE-202ENST00000349893 PHF20Q9BVI0 1012 aa17.52■□□□□ 0.4
COPE-202ENST00000349893 CACNA1GO43497 2377 aa17.52■□□□□ 0.39
COPE-202ENST00000349893 SF3B1O75533 1304 aaKnown RBP eCLIP17.51■□□□□ 0.393e-6■■■■■ 137.9
COPE-202ENST00000349893 NCAM2O15394 837 aa17.51■□□□□ 0.39
COPE-202ENST00000349893 P4HBP07237 508 aaKnown RBP17.51■□□□□ 0.39
COPE-202ENST00000349893 C8AP07357 584 aa17.51■□□□□ 0.39
COPE-202ENST00000349893 IFNAR1P17181 557 aa17.51■□□□□ 0.39
COPE-202ENST00000349893 CD72P21854 359 aa17.51■□□□□ 0.39
COPE-202ENST00000349893 AKAP17AQ02040 695 aaKnown RBP17.51■□□□□ 0.39
COPE-202ENST00000349893 EMC2Q15006 297 aa17.51■□□□□ 0.39
COPE-202ENST00000349893 LIN9Q5TKA1 542 aa17.51■□□□□ 0.39
COPE-202ENST00000349893 RTL10Q7L3V2 364 aa17.51■□□□□ 0.39
COPE-202ENST00000349893 NPAS3Q8IXF0 933 aa17.51■□□□□ 0.39
COPE-202ENST00000349893 C4orf19Q8IY42 314 aa17.51■□□□□ 0.39
COPE-202ENST00000349893 ITFG1Q8TB96 612 aa17.51■□□□□ 0.39
COPE-202ENST00000349893 LNX1Q8TBB1 728 aaPredicted RBP17.51■□□□□ 0.39
COPE-202ENST00000349893 AGXT2Q9BYV1 514 aa17.51■□□□□ 0.39
COPE-202ENST00000349893 NXF3Q9H4D5 531 aaKnown RBP17.51■□□□□ 0.39
COPE-202ENST00000349893 NAP1L2Q9ULW6 460 aaPredicted RBP17.51■□□□□ 0.39
COPE-202ENST00000349893 USP18Q9UMW8 372 aa17.51■□□□□ 0.39
COPE-202ENST00000349893 F5P12259 2224 aa17.51■□□□□ 0.39
COPE-202ENST00000349893 SLC30A4O14863 429 aa17.5■□□□□ 0.39
COPE-202ENST00000349893 LRP3O75074 770 aa17.5■□□□□ 0.39
COPE-202ENST00000349893 XYLBO75191 536 aa17.5■□□□□ 0.39
COPE-202ENST00000349893 ECI2O75521 394 aa17.5■□□□□ 0.39
COPE-202ENST00000349893 ADCY1Q08828 1119 aa17.5■□□□□ 0.39
COPE-202ENST00000349893 HSP90AA2PQ14568 343 aaPredicted RBP17.5■□□□□ 0.39
COPE-202ENST00000349893 MXD4Q14582 209 aaPredicted RBP17.5■□□□□ 0.39
COPE-202ENST00000349893 UVSSAQ2YD98 709 aa17.5■□□□□ 0.39
COPE-202ENST00000349893 PPM1LQ5SGD2 360 aa17.5■□□□□ 0.39
COPE-202ENST00000349893 TSSK4Q6SA08 328 aa17.5■□□□□ 0.39
COPE-202ENST00000349893 ZNF852Q6ZMS4 543 aa17.5■□□□□ 0.39
COPE-202ENST00000349893 TPRG1Q6ZUI0 275 aa17.5■□□□□ 0.39
COPE-202ENST00000349893 HACE1Q8IYU2 909 aa17.5■□□□□ 0.39
COPE-202ENST00000349893 NETO1Q8TDF5 533 aa17.5■□□□□ 0.39
COPE-202ENST00000349893 CPB2Q96IY4 423 aa17.5■□□□□ 0.39
COPE-202ENST00000349893 KXD1Q9BQD3 176 aa17.5■□□□□ 0.39
COPE-202ENST00000349893 TTPALQ9BTX7 342 aa17.5■□□□□ 0.39
COPE-202ENST00000349893 NFKBIZQ9BYH8 718 aa17.5■□□□□ 0.39
COPE-202ENST00000349893 KCNMB3Q9NPA1 279 aa17.5■□□□□ 0.39
COPE-202ENST00000349893 GMEB2Q9UKD1 530 aa17.5■□□□□ 0.39
COPE-202ENST00000349893 PCDHA4Q9UN74 947 aa17.5■□□□□ 0.39
COPE-202ENST00000349893 ARF4P18085 180 aaPredicted RBP17.49■□□□□ 0.39
COPE-202ENST00000349893 YWHABP31946 246 aaKnown RBP17.49■□□□□ 0.39
COPE-202ENST00000349893 NLRP5P59047 1200 aa17.49■□□□□ 0.39
COPE-202ENST00000349893 MBTD1Q05BQ5 628 aa17.49■□□□□ 0.39
COPE-202ENST00000349893 NCBP1Q09161 790 aaKnown RBP17.49■□□□□ 0.39
COPE-202ENST00000349893 MTAPQ13126 283 aa17.49■□□□□ 0.39
COPE-202ENST00000349893 NPY5RQ15761 445 aa17.49■□□□□ 0.39
COPE-202ENST00000349893 LAIR1Q6GTX8 287 aa17.49■□□□□ 0.39
COPE-202ENST00000349893 Q6ZUG5 572 aa17.49■□□□□ 0.39
COPE-202ENST00000349893 DAGLBQ8NCG7 672 aa17.49■□□□□ 0.39
COPE-202ENST00000349893 KCNB2Q92953 911 aa17.49■□□□□ 0.39
COPE-202ENST00000349893 BRF1Q92994 677 aa17.49■□□□□ 0.39
COPE-202ENST00000349893 FAM20AQ96MK3 541 aa17.49■□□□□ 0.39
COPE-202ENST00000349893 IER2Q9BTL4 223 aa17.49■□□□□ 0.39
COPE-202ENST00000349893 SLC26A6Q9BXS9 759 aa17.49■□□□□ 0.39
COPE-202ENST00000349893 XPNPEP1Q9NQW7 623 aa17.49■□□□□ 0.39
COPE-202ENST00000349893 DDX25Q9UHL0 483 aaKnown RBP17.49■□□□□ 0.39
COPE-202ENST00000349893 MRPS17Q9Y2R5 130 aaKnown RBP17.49■□□□□ 0.39
COPE-202ENST00000349893 FRYQ5TBA9 3013 aa17.49■□□□□ 0.39
COPE-202ENST00000349893 VWA8A3KMH1 1905 aa17.49■□□□□ 0.39
COPE-202ENST00000349893 CEP295Q9C0D2 2601 aa17.49■□□□□ 0.39
COPE-202ENST00000349893 COL4A2P08572 1712 aa17.48■□□□□ 0.39
COPE-202ENST00000349893 CCL16O15467 120 aa17.48■□□□□ 0.39
COPE-202ENST00000349893 SLC37A4O43826 429 aa17.48■□□□□ 0.39
COPE-202ENST00000349893 TADA2AO75478 443 aa17.48■□□□□ 0.39
COPE-202ENST00000349893 AKAP5P24588 427 aa17.48■□□□□ 0.39
COPE-202ENST00000349893 NRLP54845 237 aa17.48■□□□□ 0.39
COPE-202ENST00000349893 EVCP57679 992 aa17.48■□□□□ 0.39
COPE-202ENST00000349893 FGD1P98174 961 aa17.48■□□□□ 0.39
COPE-202ENST00000349893 TUSC3Q13454 348 aa17.48■□□□□ 0.39
COPE-202ENST00000349893 PSMD5Q16401 504 aa17.48■□□□□ 0.39
COPE-202ENST00000349893 PDXDC1Q6P996 788 aa17.48■□□□□ 0.39
COPE-202ENST00000349893 FAM177A1Q8N128 213 aaPredicted RBP17.48■□□□□ 0.39
COPE-202ENST00000349893 CELF5Q8N6W0 485 aaKnown RBP17.48■□□□□ 0.39
COPE-202ENST00000349893 DNASE1L2Q92874 299 aa17.48■□□□□ 0.39
COPE-202ENST00000349893 MTRQ99707 1265 aa17.48■□□□□ 0.39
COPE-202ENST00000349893 PAAF1Q9BRP4 392 aa17.48■□□□□ 0.39
COPE-202ENST00000349893 LXNQ9BS40 222 aa17.48■□□□□ 0.39
COPE-202ENST00000349893 CHRDQ9H2X0 955 aa17.48■□□□□ 0.39
COPE-202ENST00000349893 AVENQ9NQS1 362 aaPredicted RBP17.48■□□□□ 0.39
COPE-202ENST00000349893 GDE1Q9NZC3 331 aa17.48■□□□□ 0.39
COPE-202ENST00000349893 DNMT3BQ9UBC3 853 aaKnown RBP17.48■□□□□ 0.39
COPE-202ENST00000349893 BAHCC1Q9P281 2608 aa17.47■□□□□ 0.39
COPE-202ENST00000349893 A0A1B0GUA9 196 aa17.47■□□□□ 0.39
COPE-202ENST00000349893 ADAM12O43184 909 aa17.47■□□□□ 0.39
COPE-202ENST00000349893 CPA1P15085 419 aa17.47■□□□□ 0.39
COPE-202ENST00000349893 RAB33AQ14088 237 aa17.47■□□□□ 0.39
COPE-202ENST00000349893 PABPC1LQ4VXU2 614 aaKnown RBP17.47■□□□□ 0.39
COPE-202ENST00000349893 PPM1JQ5JR12 505 aa17.47■□□□□ 0.39
COPE-202ENST00000349893 SLC27A1Q6PCB7 646 aa17.47■□□□□ 0.39
COPE-202ENST00000349893 OTUD6AQ7L8S5 288 aa17.47■□□□□ 0.39
Retrieved 100 of 20,778 RNA–protein pairs in 19.7 ms