RNA–Protein interactions for RNA: ENST00000349228.8

TNFSF13-202, Transcript of TNF superfamily member 13, humanhuman

TSL 1 (best) BASIC

Gene TNFSF13, Length 2,036 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TNFSF13-202ENST00000349228 PROCA1Q8NCQ7 364 aaPredicted RBP16.62■□□□□ 0.25
TNFSF13-202ENST00000349228 ZNF473Q8WTR7 871 aaKnown RBP16.62■□□□□ 0.25
TNFSF13-202ENST00000349228 TRIM11Q96F44 468 aa16.62■□□□□ 0.25
TNFSF13-202ENST00000349228 TEPSINQ96N21 525 aa16.62■□□□□ 0.25
TNFSF13-202ENST00000349228 ERVK-5Q9HDB9 667 aa16.62■□□□□ 0.25
TNFSF13-202ENST00000349228 GPRC5CQ9NQ84 441 aa16.62■□□□□ 0.25
TNFSF13-202ENST00000349228 HOMER2Q9NSB8 354 aa16.62■□□□□ 0.25
TNFSF13-202ENST00000349228 GOLGA8IPA6NC78 632 aa16.61■□□□□ 0.25
TNFSF13-202ENST00000349228 GOLGA8JA6NMD2 632 aa16.61■□□□□ 0.25
TNFSF13-202ENST00000349228 STAM2O75886 525 aa16.61■□□□□ 0.25
TNFSF13-202ENST00000349228 DGAT1O75907 488 aa16.61■□□□□ 0.25
TNFSF13-202ENST00000349228 PSAPP07602 524 aa16.61■□□□□ 0.25
TNFSF13-202ENST00000349228 KCNA3P22001 575 aa16.61■□□□□ 0.25
TNFSF13-202ENST00000349228 RPS12P25398 132 aaKnown RBP16.61■□□□□ 0.25
TNFSF13-202ENST00000349228 RXRBP28702 533 aa16.61■□□□□ 0.25
TNFSF13-202ENST00000349228 HPDP32754 393 aaPredicted RBP16.61■□□□□ 0.25
TNFSF13-202ENST00000349228 PMS2P54278 862 aa16.61■□□□□ 0.25
TNFSF13-202ENST00000349228 RWDD2BP57060 319 aa16.61■□□□□ 0.25
TNFSF13-202ENST00000349228 ZNF280AP59817 542 aaPredicted RBP16.61■□□□□ 0.25
TNFSF13-202ENST00000349228 BPIFB4P59827 614 aa16.61■□□□□ 0.25
TNFSF13-202ENST00000349228 CYP24A1Q07973 514 aa16.61■□□□□ 0.25
TNFSF13-202ENST00000349228 SLMAPQ14BN4 828 aa16.61■□□□□ 0.25
TNFSF13-202ENST00000349228 SKIDA1Q1XH10 827 aa16.61■□□□□ 0.25
TNFSF13-202ENST00000349228 TTC31Q49AM3 519 aaPredicted RBP16.61■□□□□ 0.25
TNFSF13-202ENST00000349228 ANO5Q75V66 913 aa16.61■□□□□ 0.25
TNFSF13-202ENST00000349228 CYFIP1Q7L576 1253 aa16.61■□□□□ 0.25
TNFSF13-202ENST00000349228 C12orf50Q8NA57 414 aaPredicted RBP16.61■□□□□ 0.25
TNFSF13-202ENST00000349228 OR2W6PQ8NHA6 318 aa16.61■□□□□ 0.25
TNFSF13-202ENST00000349228 MYCBPAPQ8TBZ2 947 aa16.61■□□□□ 0.25
TNFSF13-202ENST00000349228 SEMA4DQ92854 862 aa16.61■□□□□ 0.25
TNFSF13-202ENST00000349228 KCNN1Q92952 543 aa16.61■□□□□ 0.25
TNFSF13-202ENST00000349228 KAT5Q92993 513 aa16.61■□□□□ 0.25
TNFSF13-202ENST00000349228 CENPTQ96BT3 561 aa16.61■□□□□ 0.25
TNFSF13-202ENST00000349228 TLCD1Q96CP7 247 aa16.61■□□□□ 0.25
TNFSF13-202ENST00000349228 CAMKK2Q96RR4 588 aa16.61■□□□□ 0.25
TNFSF13-202ENST00000349228 NUP85Q9BW27 656 aa16.61■□□□□ 0.25
TNFSF13-202ENST00000349228 ATP8A1Q9Y2Q0 1164 aa16.61■□□□□ 0.25
TNFSF13-202ENST00000349228 TNS1Q9HBL0 1735 aaKnown RBP16.61■□□□□ 0.25
TNFSF13-202ENST00000349228 NFASCO94856 1347 aa16.61■□□□□ 0.25
TNFSF13-202ENST00000349228 COL4A5P29400 1685 aa16.61■□□□□ 0.25
TNFSF13-202ENST00000349228 TESPA1A2RU30 521 aaPredicted RBP16.6■□□□□ 0.25
TNFSF13-202ENST00000349228 GMNCA6NCL1 334 aa16.6■□□□□ 0.25
TNFSF13-202ENST00000349228 VWA5AO00534 786 aa16.6■□□□□ 0.25
TNFSF13-202ENST00000349228 SPOPO43791 374 aa16.6■□□□□ 0.25
TNFSF13-202ENST00000349228 MYBL1P10243 752 aa16.6■□□□□ 0.25
TNFSF13-202ENST00000349228 SLC47A2Q86VL8 602 aa16.6■□□□□ 0.25
TNFSF13-202ENST00000349228 SLC13A5Q86YT5 568 aaPredicted RBP16.6■□□□□ 0.25
TNFSF13-202ENST00000349228 GPD1LQ8N335 351 aa16.6■□□□□ 0.25
TNFSF13-202ENST00000349228 KRT35Q92764 455 aa16.6■□□□□ 0.25
TNFSF13-202ENST00000349228 ZNF653Q96CK0 615 aa16.6■□□□□ 0.25
TNFSF13-202ENST00000349228 PGM2Q96G03 612 aa16.6■□□□□ 0.25
TNFSF13-202ENST00000349228 CEP170P1Q96L14 293 aa16.6■□□□□ 0.25
TNFSF13-202ENST00000349228 TMEM109Q9BVC6 243 aa16.6■□□□□ 0.25
TNFSF13-202ENST00000349228 RPAP3Q9H6T3 665 aaPredicted RBP16.6■□□□□ 0.25
TNFSF13-202ENST00000349228 NOVA2Q9UNW9 492 aaKnown RBP16.6■□□□□ 0.25
TNFSF13-202ENST00000349228 TMEM110-MUSTN1A8MSY1 372 aa16.6■□□□□ 0.25
TNFSF13-202ENST00000349228 MEFVO15553 781 aaPredicted RBP16.6■□□□□ 0.25
TNFSF13-202ENST00000349228 NR3C2P08235 984 aa16.6■□□□□ 0.25
TNFSF13-202ENST00000349228 MMEP08473 750 aa16.6■□□□□ 0.25
TNFSF13-202ENST00000349228 DPEP1P16444 411 aa16.6■□□□□ 0.25
TNFSF13-202ENST00000349228 DENND2CQ68D51 928 aa16.6■□□□□ 0.25
TNFSF13-202ENST00000349228 PLA2G4FQ68DD2 849 aa16.6■□□□□ 0.25
TNFSF13-202ENST00000349228 CCDC137Q6PK04 289 aaKnown RBP16.6■□□□□ 0.25
TNFSF13-202ENST00000349228 NSMFQ6X4W1 530 aa16.6■□□□□ 0.25
TNFSF13-202ENST00000349228 ZSWIM2Q8NEG5 633 aa16.6■□□□□ 0.25
TNFSF13-202ENST00000349228 POMGNT1Q8WZA1 660 aa16.6■□□□□ 0.25
TNFSF13-202ENST00000349228 GLG1Q92896 1179 aa16.6■□□□□ 0.25
TNFSF13-202ENST00000349228 SLCO2A1Q92959 643 aa16.6■□□□□ 0.25
TNFSF13-202ENST00000349228 CCDC127Q96BQ5 260 aa16.6■□□□□ 0.25
TNFSF13-202ENST00000349228 IFT74Q96LB3 600 aa16.6■□□□□ 0.25
TNFSF13-202ENST00000349228 TRIM31Q9BZY9 425 aa16.6■□□□□ 0.25
TNFSF13-202ENST00000349228 AS3MTQ9HBK9 375 aa16.6■□□□□ 0.25
TNFSF13-202ENST00000349228 AVENQ9NQS1 362 aaPredicted RBP16.6■□□□□ 0.25
TNFSF13-202ENST00000349228 TRAPPC3O43617 180 aa16.59■□□□□ 0.25
TNFSF13-202ENST00000349228 COILP38432 576 aaPredicted RBP16.59■□□□□ 0.25
TNFSF13-202ENST00000349228 PLTPP55058 493 aa16.59■□□□□ 0.25
TNFSF13-202ENST00000349228 CLEC16AQ2KHT3 1053 aa16.59■□□□□ 0.25
TNFSF13-202ENST00000349228 PPP1R2P3Q6NXS1 205 aa16.59■□□□□ 0.25
TNFSF13-202ENST00000349228 ZDHHC24Q6UX98 284 aa16.59■□□□□ 0.25
TNFSF13-202ENST00000349228 SYDE1Q6ZW31 735 aaPredicted RBP16.59■□□□□ 0.25
TNFSF13-202ENST00000349228 ADAT2Q7Z6V5 191 aaKnown RBP16.59■□□□□ 0.25
TNFSF13-202ENST00000349228 OTUD6BQ8N6M0 293 aa16.59■□□□□ 0.25
TNFSF13-202ENST00000349228 NSUN6Q8TEA1 469 aaKnown RBP16.59■□□□□ 0.25
TNFSF13-202ENST00000349228 JDP2Q8WYK2 163 aa16.59■□□□□ 0.25
TNFSF13-202ENST00000349228 DDX1Q92499 740 aaKnown RBP16.59■□□□□ 0.25
TNFSF13-202ENST00000349228 STMN4Q9H169 189 aaPredicted RBP16.59■□□□□ 0.25
TNFSF13-202ENST00000349228 LRRC19Q9H756 370 aa16.59■□□□□ 0.25
TNFSF13-202ENST00000349228 PDLIM7Q9NR12 457 aa16.59■□□□□ 0.25
TNFSF13-202ENST00000349228 RNF146Q9NTX7 359 aa16.59■□□□□ 0.25
TNFSF13-202ENST00000349228 TMEM51Q9NW97 253 aa16.59■□□□□ 0.25
TNFSF13-202ENST00000349228 SNX24Q9Y343 169 aa16.59■□□□□ 0.25
TNFSF13-202ENST00000349228 PASKQ96RG2 1323 aa16.59■□□□□ 0.25
TNFSF13-202ENST00000349228 E7EVH7 732 aa16.58■□□□□ 0.25
TNFSF13-202ENST00000349228 PYGMP11217 842 aa16.58■□□□□ 0.25
TNFSF13-202ENST00000349228 MAN1A1P33908 653 aa16.58■□□□□ 0.25
TNFSF13-202ENST00000349228 SLC1A1P43005 524 aa16.58■□□□□ 0.25
TNFSF13-202ENST00000349228 DRP2Q13474 957 aa16.58■□□□□ 0.25
TNFSF13-202ENST00000349228 BAATQ14032 418 aaPredicted RBP16.58■□□□□ 0.25
TNFSF13-202ENST00000349228 C6orf118Q5T5N4 469 aa16.58■□□□□ 0.25
TNFSF13-202ENST00000349228 DCAF15Q66K64 600 aa16.58■□□□□ 0.25
Retrieved 100 of 20,778 RNA–protein pairs in 29 ms