RNA–Protein interactions for RNA: ENST00000349124.2

PTP4A3-202, Transcript of protein tyrosine phosphatase type IVA, member 3, humanhuman

TSL 1 (best) BASIC

Gene PTP4A3, Length 2,710 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTP4A3-202ENST00000349124 TELO2Q9Y4R8 837 aa19.41■□□□□ 0.7
PTP4A3-202ENST00000349124 PFASO15067 1338 aa19.41■□□□□ 0.7
PTP4A3-202ENST00000349124 PODXLO00592 558 aa19.4■□□□□ 0.7
PTP4A3-202ENST00000349124 GRIN3BO60391 1043 aa19.4■□□□□ 0.7
PTP4A3-202ENST00000349124 MYCLP12524 364 aaPredicted RBP19.4■□□□□ 0.7
PTP4A3-202ENST00000349124 SSTR3P32745 418 aaPredicted RBP19.4■□□□□ 0.7
PTP4A3-202ENST00000349124 CHKAP35790 457 aa19.4■□□□□ 0.7
PTP4A3-202ENST00000349124 RNF207Q6ZRF8 634 aa19.4■□□□□ 0.7
PTP4A3-202ENST00000349124 FUKQ8N0W3 1084 aa19.4■□□□□ 0.7
PTP4A3-202ENST00000349124 IPO4Q8TEX9 1081 aaKnown RBP19.4■□□□□ 0.7
PTP4A3-202ENST00000349124 ART4Q93070 314 aa19.4■□□□□ 0.7
PTP4A3-202ENST00000349124 AAASQ9NRG9 546 aa19.4■□□□□ 0.7
PTP4A3-202ENST00000349124 SLTMQ9NWH9 1034 aaKnown RBP eCLIP19.4■□□□□ 0.7
PTP4A3-202ENST00000349124 TMOD2Q9NZR1 351 aa19.4■□□□□ 0.7
PTP4A3-202ENST00000349124 ASTN2O75129 1339 aaPredicted RBP19.4■□□□□ 0.7
PTP4A3-202ENST00000349124 RASGRF2O14827 1237 aa19.4■□□□□ 0.7
PTP4A3-202ENST00000349124 VIMP08670 466 aaKnown RBP19.4■□□□□ 0.7
PTP4A3-202ENST00000349124 CNGA1P29973 690 aa19.4■□□□□ 0.7
PTP4A3-202ENST00000349124 VPS41P49754 854 aa19.4■□□□□ 0.7
PTP4A3-202ENST00000349124 HSD17B4P51659 736 aa19.4■□□□□ 0.7
PTP4A3-202ENST00000349124 TRAF1Q13077 416 aa19.4■□□□□ 0.7
PTP4A3-202ENST00000349124 XKR9Q5GH70 373 aa19.4■□□□□ 0.7
PTP4A3-202ENST00000349124 SWT1Q5T5J6 900 aaKnown RBP19.4■□□□□ 0.7
PTP4A3-202ENST00000349124 FMNL3Q8IVF7 1028 aa19.4■□□□□ 0.7
PTP4A3-202ENST00000349124 C3orf20Q8ND61 904 aa19.4■□□□□ 0.7
PTP4A3-202ENST00000349124 PARD3BQ8TEW8 1205 aa19.4■□□□□ 0.7
PTP4A3-202ENST00000349124 C7orf43Q8WVR3 580 aa19.4■□□□□ 0.7
PTP4A3-202ENST00000349124 CTNNAL1Q9UBT7 734 aa19.4■□□□□ 0.7
PTP4A3-202ENST00000349124 MTRF1LQ9UGC7 380 aaKnown RBP19.4■□□□□ 0.7
PTP4A3-202ENST00000349124 O00370 1275 aa19.39■□□□□ 0.7
PTP4A3-202ENST00000349124 CYP1A2P05177 515 aa19.39■□□□□ 0.7
PTP4A3-202ENST00000349124 GZMAP12544 262 aa19.39■□□□□ 0.7
PTP4A3-202ENST00000349124 MTMR1Q13613 665 aa19.39■□□□□ 0.7
PTP4A3-202ENST00000349124 PPP1R7Q15435 360 aa19.39■□□□□ 0.7
PTP4A3-202ENST00000349124 SPDYCQ5MJ68 293 aa19.39■□□□□ 0.7
PTP4A3-202ENST00000349124 LMBRD2Q68DH5 695 aaPredicted RBP19.39■□□□□ 0.7
PTP4A3-202ENST00000349124 EXOC3L1Q86VI1 746 aa19.39■□□□□ 0.7
PTP4A3-202ENST00000349124 FAM228AQ86W67 206 aa19.39■□□□□ 0.7
PTP4A3-202ENST00000349124 FAM151AQ8WW52 585 aa19.39■□□□□ 0.7
PTP4A3-202ENST00000349124 DDX1Q92499 740 aaKnown RBP19.39■□□□□ 0.7
PTP4A3-202ENST00000349124 CNTNAP1P78357 1384 aa19.39■□□□□ 0.7
PTP4A3-202ENST00000349124 CCNE2O96020 404 aa19.39■□□□□ 0.69
PTP4A3-202ENST00000349124 DLGAP5Q15398 846 aa19.39■□□□□ 0.69
PTP4A3-202ENST00000349124 C6orf118Q5T5N4 469 aa19.39■□□□□ 0.69
PTP4A3-202ENST00000349124 PSPC1Q8WXF1 523 aaKnown RBP19.39■□□□□ 0.69
PTP4A3-202ENST00000349124 BSNDQ8WZ55 320 aa19.39■□□□□ 0.69
PTP4A3-202ENST00000349124 CENPTQ96BT3 561 aa19.39■□□□□ 0.69
PTP4A3-202ENST00000349124 COL11A2P13942 1736 aaPredicted RBP19.39■□□□□ 0.69
PTP4A3-202ENST00000349124 P4HA2O15460 535 aa19.38■□□□□ 0.69
PTP4A3-202ENST00000349124 RARGP13631 454 aa19.38■□□□□ 0.69
PTP4A3-202ENST00000349124 KRT5P13647 590 aa19.38■□□□□ 0.69
PTP4A3-202ENST00000349124 PTGER2P43116 358 aa19.38■□□□□ 0.69
PTP4A3-202ENST00000349124 MFAP3P55082 362 aa19.38■□□□□ 0.69
PTP4A3-202ENST00000349124 RWDD2BP57060 319 aa19.38■□□□□ 0.69
PTP4A3-202ENST00000349124 TCEAL1Q15170 157 aa19.38■□□□□ 0.69
PTP4A3-202ENST00000349124 CYB5D1Q6P9G0 228 aa19.38■□□□□ 0.69
PTP4A3-202ENST00000349124 PRUNE1Q86TP1 453 aa19.38■□□□□ 0.69
PTP4A3-202ENST00000349124 CPA5Q8WXQ8 436 aa19.38■□□□□ 0.69
PTP4A3-202ENST00000349124 MTUS1Q9ULD2 1270 aa19.38■□□□□ 0.69
PTP4A3-202ENST00000349124 SLX4Q8IY92 1834 aa19.38■□□□□ 0.69
PTP4A3-202ENST00000349124 SORBS3O60504 671 aa19.38■□□□□ 0.69
PTP4A3-202ENST00000349124 NPTX2P47972 431 aa19.38■□□□□ 0.69
PTP4A3-202ENST00000349124 CYP1B1Q16678 543 aa19.38■□□□□ 0.69
PTP4A3-202ENST00000349124 SLC39A4Q6P5W5 647 aa19.38■□□□□ 0.69
PTP4A3-202ENST00000349124 C12orf56Q8IXR9 622 aa19.38■□□□□ 0.69
PTP4A3-202ENST00000349124 CCDC197Q8NCU1 140 aa19.38■□□□□ 0.69
PTP4A3-202ENST00000349124 ZKSCAN4Q969J2 545 aaPredicted RBP19.38■□□□□ 0.69
PTP4A3-202ENST00000349124 HEMGNQ9BXL5 484 aa19.38■□□□□ 0.69
PTP4A3-202ENST00000349124 ZNF341Q9BYN7 854 aa19.38■□□□□ 0.69
PTP4A3-202ENST00000349124 CDC42EP4Q9H3Q1 356 aaKnown RBP19.38■□□□□ 0.69
PTP4A3-202ENST00000349124 CNOT7Q9UIV1 285 aaKnown RBP19.38■□□□□ 0.69
PTP4A3-202ENST00000349124 FEM1BQ9UK73 627 aa19.38■□□□□ 0.69
PTP4A3-202ENST00000349124 TBX20Q9UMR3 447 aa19.38■□□□□ 0.69
PTP4A3-202ENST00000349124 CD2APQ9Y5K6 639 aa19.38■□□□□ 0.69
PTP4A3-202ENST00000349124 CCT8L1PA6NM43 557 aa19.38■□□□□ 0.69
PTP4A3-202ENST00000349124 MTA2O94776 668 aa19.38■□□□□ 0.69
PTP4A3-202ENST00000349124 HSPA6P17066 643 aa19.38■□□□□ 0.69
PTP4A3-202ENST00000349124 CDR2Q01850 454 aa19.38■□□□□ 0.69
PTP4A3-202ENST00000349124 KRT17Q04695 432 aa19.38■□□□□ 0.69
PTP4A3-202ENST00000349124 KRT39Q6A163 491 aa19.38■□□□□ 0.69
PTP4A3-202ENST00000349124 SV2AQ7L0J3 742 aa19.38■□□□□ 0.69
PTP4A3-202ENST00000349124 TMEM161BQ8NDZ6 487 aa19.38■□□□□ 0.69
PTP4A3-202ENST00000349124 ANAPC7Q9UJX3 599 aa19.38■□□□□ 0.69
PTP4A3-202ENST00000349124 R3HDM2Q9Y2K5 976 aaKnown RBP19.38■□□□□ 0.69
PTP4A3-202ENST00000349124 UBIAD1Q9Y5Z9 338 aa19.38■□□□□ 0.69
PTP4A3-202ENST00000349124 DENND3A2RUS2 1198 aa19.37■□□□□ 0.69
PTP4A3-202ENST00000349124 ECEL1O95672 775 aa19.37■□□□□ 0.69
PTP4A3-202ENST00000349124 ICAM1P05362 532 aa19.37■□□□□ 0.69
PTP4A3-202ENST00000349124 ADCY1Q08828 1119 aa19.37■□□□□ 0.69
PTP4A3-202ENST00000349124 DRP2Q13474 957 aa19.37■□□□□ 0.69
PTP4A3-202ENST00000349124 FAM160B2Q86V87 743 aa19.37■□□□□ 0.69
PTP4A3-202ENST00000349124 SYTL5Q8TDW5 730 aaPredicted RBP19.37■□□□□ 0.69
PTP4A3-202ENST00000349124 ACTR5Q9H9F9 607 aaPredicted RBP19.37■□□□□ 0.69
PTP4A3-202ENST00000349124 GTF3C4Q9UKN8 822 aa19.37■□□□□ 0.69
PTP4A3-202ENST00000349124 APBA3O96018 575 aa19.37■□□□□ 0.69
PTP4A3-202ENST00000349124 AGTP01019 485 aa19.37■□□□□ 0.69
PTP4A3-202ENST00000349124 ADCY2Q08462 1091 aa19.37■□□□□ 0.69
PTP4A3-202ENST00000349124 CNGA2Q16280 664 aa19.37■□□□□ 0.69
PTP4A3-202ENST00000349124 SGO2Q562F6 1265 aa19.37■□□□□ 0.69
PTP4A3-202ENST00000349124 FAM133BQ5BKY9 247 aaKnown RBP19.37■□□□□ 0.69
Retrieved 100 of 20,778 RNA–protein pairs in 22.1 ms