RNA–Protein interactions for RNA: ENST00000348987.4

SCARF1-202, Transcript of scavenger receptor class F member 1, humanhuman

TSL 1 (best) BASIC

Gene SCARF1, Length 2,619 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCARF1-202ENST00000348987 HHIPL2Q6UWX4 724 aa19.96■□□□□ 0.79
SCARF1-202ENST00000348987 INTS8Q75QN2 995 aaKnown RBP19.96■□□□□ 0.79
SCARF1-202ENST00000348987 DRAXINQ8NBI3 349 aaPredicted RBP19.96■□□□□ 0.79
SCARF1-202ENST00000348987 OLIG1Q8TAK6 271 aa19.96■□□□□ 0.79
SCARF1-202ENST00000348987 DNAJC9Q8WXX5 260 aa19.96■□□□□ 0.79
SCARF1-202ENST00000348987 LRMDAQ9H2I8 198 aa19.96■□□□□ 0.79
SCARF1-202ENST00000348987 RGL1Q9NZL6 768 aa19.96■□□□□ 0.79
SCARF1-202ENST00000348987 GCNT4Q9P109 453 aa19.96■□□□□ 0.79
SCARF1-202ENST00000348987 FAM198AQ9UFP1 575 aa19.96■□□□□ 0.79
SCARF1-202ENST00000348987 COG5Q9UP83 839 aa19.96■□□□□ 0.79
SCARF1-202ENST00000348987 F5H6K3 240 aa19.95■□□□□ 0.78
SCARF1-202ENST00000348987 ENTPD5O75356 428 aa19.95■□□□□ 0.78
SCARF1-202ENST00000348987 MARCKSL1P49006 195 aa19.95■□□□□ 0.78
SCARF1-202ENST00000348987 POLE2P56282 527 aa19.95■□□□□ 0.78
SCARF1-202ENST00000348987 TNIP1Q15025 636 aa19.95■□□□□ 0.78
SCARF1-202ENST00000348987 MTFR1Q15390 333 aa19.95■□□□□ 0.78
SCARF1-202ENST00000348987 EDRF1Q3B7T1 1238 aa19.95■□□□□ 0.78
SCARF1-202ENST00000348987 TBC1D25Q3MII6 688 aa19.95■□□□□ 0.78
SCARF1-202ENST00000348987 UCMAQ8WVF2 138 aa19.95■□□□□ 0.78
SCARF1-202ENST00000348987 KRT35Q92764 455 aa19.95■□□□□ 0.78
SCARF1-202ENST00000348987 ITFG2Q969R8 447 aa19.95■□□□□ 0.78
SCARF1-202ENST00000348987 RUNDC3BQ96NL0 473 aa19.95■□□□□ 0.78
SCARF1-202ENST00000348987 RUSC1Q9BVN2 902 aa19.95■□□□□ 0.78
SCARF1-202ENST00000348987 THAP2Q9H0W7 228 aa19.95■□□□□ 0.78
SCARF1-202ENST00000348987 BHMT2Q9H2M3 363 aa19.95■□□□□ 0.78
SCARF1-202ENST00000348987 PCYOX1Q9UHG3 505 aa19.95■□□□□ 0.78
SCARF1-202ENST00000348987 CLIC2O15247 247 aa19.95■□□□□ 0.78
SCARF1-202ENST00000348987 TMEM253P0C7T8 217 aa19.95■□□□□ 0.78
SCARF1-202ENST00000348987 CHRNA5P30532 468 aa19.95■□□□□ 0.78
SCARF1-202ENST00000348987 KCNJ1P48048 391 aa19.95■□□□□ 0.78
SCARF1-202ENST00000348987 CCDC15Q0P6D6 951 aa19.95■□□□□ 0.78
SCARF1-202ENST00000348987 KNOP1Q1ED39 458 aaKnown RBP19.95■□□□□ 0.78
SCARF1-202ENST00000348987 FRMD5Q7Z6J6 570 aa19.95■□□□□ 0.78
SCARF1-202ENST00000348987 SUPV3L1Q8IYB8 786 aaKnown RBP eCLIP19.95■□□□□ 0.78
SCARF1-202ENST00000348987 ZFAND2BQ8WV99 257 aa19.95■□□□□ 0.78
SCARF1-202ENST00000348987 ART4Q93070 314 aa19.95■□□□□ 0.78
SCARF1-202ENST00000348987 EPAS1Q99814 870 aa19.95■□□□□ 0.78
SCARF1-202ENST00000348987 PITPNM3Q9BZ71 974 aa19.95■□□□□ 0.78
SCARF1-202ENST00000348987 SLTMQ9NWH9 1034 aaKnown RBP eCLIP19.95■□□□□ 0.78
SCARF1-202ENST00000348987 ATP8B3O60423 1300 aa19.95■□□□□ 0.78
SCARF1-202ENST00000348987 ZBTB39O15060 712 aa19.94■□□□□ 0.78
SCARF1-202ENST00000348987 RNF8O76064 485 aa19.94■□□□□ 0.78
SCARF1-202ENST00000348987 ACADSP16219 412 aa19.94■□□□□ 0.78
SCARF1-202ENST00000348987 STAT1P42224 750 aa19.94■□□□□ 0.78
SCARF1-202ENST00000348987 IKQ13123 557 aaPredicted RBP19.94■□□□□ 0.78
SCARF1-202ENST00000348987 RRP1BQ14684 758 aaKnown RBP19.94■□□□□ 0.78
SCARF1-202ENST00000348987 CCDC105Q8IYK2 499 aa19.94■□□□□ 0.78
SCARF1-202ENST00000348987 SLFN12Q8IYM2 578 aa19.94■□□□□ 0.78
SCARF1-202ENST00000348987 PHC3Q8NDX5 983 aa19.94■□□□□ 0.78
SCARF1-202ENST00000348987 CCDC17Q96LX7 622 aa19.94■□□□□ 0.78
SCARF1-202ENST00000348987 TAS2R14Q9NYV8 317 aa19.94■□□□□ 0.78
SCARF1-202ENST00000348987 TBK1Q9UHD2 729 aa19.94■□□□□ 0.78
SCARF1-202ENST00000348987 DNM3Q9UQ16 869 aa19.94■□□□□ 0.78
SCARF1-202ENST00000348987 NCANO14594 1321 aa19.94■□□□□ 0.78
SCARF1-202ENST00000348987 PITPNM2Q9BZ72 1349 aa19.94■□□□□ 0.78
SCARF1-202ENST00000348987 EML1O00423 815 aa19.94■□□□□ 0.78
SCARF1-202ENST00000348987 RPA1P27694 616 aa19.94■□□□□ 0.78
SCARF1-202ENST00000348987 EPHB2P29323 1055 aa19.94■□□□□ 0.78
SCARF1-202ENST00000348987 TSNAXIP1Q2TAA8 658 aa19.94■□□□□ 0.78
SCARF1-202ENST00000348987 MUM1Q2TAK8 710 aa19.94■□□□□ 0.78
SCARF1-202ENST00000348987 SYT2Q8N9I0 419 aaPredicted RBP19.94■□□□□ 0.78
SCARF1-202ENST00000348987 SERPINB12Q96P63 405 aa19.94■□□□□ 0.78
SCARF1-202ENST00000348987 POP1Q99575 1024 aaKnown RBP19.94■□□□□ 0.78
SCARF1-202ENST00000348987 TBC1D10AQ9BXI6 508 aa19.94■□□□□ 0.78
SCARF1-202ENST00000348987 TRIM4Q9C037 500 aa19.94■□□□□ 0.78
SCARF1-202ENST00000348987 KIAA1683Q9H0B3 1180 aa19.94■□□□□ 0.78
SCARF1-202ENST00000348987 SEPT11Q9NVA2 429 aaKnown RBP19.94■□□□□ 0.78
SCARF1-202ENST00000348987 ALG6Q9Y672 507 aa19.94■□□□□ 0.78
SCARF1-202ENST00000348987 TCRBV7S2A1N4TA0A589 114 aa19.93■□□□□ 0.78
SCARF1-202ENST00000348987 MSH4O15457 936 aa19.93■□□□□ 0.78
SCARF1-202ENST00000348987 NPR1P16066 1061 aa19.93■□□□□ 0.78
SCARF1-202ENST00000348987 MKRN3Q13064 507 aaKnown RBP19.93■□□□□ 0.78
SCARF1-202ENST00000348987 ACVR2BQ13705 512 aa19.93■□□□□ 0.78
SCARF1-202ENST00000348987 ZNF449Q6P9G9 518 aa19.93■□□□□ 0.78
SCARF1-202ENST00000348987 EPM2AIP1Q7L775 607 aaPredicted RBP19.93■□□□□ 0.78
SCARF1-202ENST00000348987 AGGF1Q8N302 714 aaeCLIP19.93■□□□□ 0.78
SCARF1-202ENST00000348987 EZH1Q92800 747 aaPredicted RBP19.93■□□□□ 0.78
SCARF1-202ENST00000348987 MKL1Q969V6 931 aa19.93■□□□□ 0.78
SCARF1-202ENST00000348987 MAGEB18Q96M61 343 aa19.93■□□□□ 0.78
SCARF1-202ENST00000348987 TAOK3Q9H2K8 898 aa19.93■□□□□ 0.78
SCARF1-202ENST00000348987 TRAF3IP3Q9Y228 551 aa19.93■□□□□ 0.78
SCARF1-202ENST00000348987 ANKRD31Q8N7Z5 1873 aa19.93■□□□□ 0.78
SCARF1-202ENST00000348987 SMCHD1A6NHR9 2005 aa19.93■□□□□ 0.78
SCARF1-202ENST00000348987 PYGLP06737 847 aa19.93■□□□□ 0.78
SCARF1-202ENST00000348987 FOXN2P32314 431 aa19.93■□□□□ 0.78
SCARF1-202ENST00000348987 SESN3P58005 492 aa19.93■□□□□ 0.78
SCARF1-202ENST00000348987 CTTNQ14247 550 aaKnown RBP19.93■□□□□ 0.78
SCARF1-202ENST00000348987 SETDB1Q15047 1291 aa19.93■□□□□ 0.78
SCARF1-202ENST00000348987 PPP4R3CPQ6ZMV5 832 aa19.93■□□□□ 0.78
SCARF1-202ENST00000348987 CYP4X1Q8N118 509 aa19.93■□□□□ 0.78
SCARF1-202ENST00000348987 ENDOVQ8N8Q3 282 aaKnown RBP19.93■□□□□ 0.78
SCARF1-202ENST00000348987 DNAJC17Q9NVM6 304 aaKnown RBP19.93■□□□□ 0.78
SCARF1-202ENST00000348987 CHKBQ9Y259 395 aa19.93■□□□□ 0.78
SCARF1-202ENST00000348987 ASTN1O14525 1302 aa19.92■□□□□ 0.78
SCARF1-202ENST00000348987 TMEM110-MUSTN1A8MSY1 372 aa19.92■□□□□ 0.78
SCARF1-202ENST00000348987 NDUFB10O96000 172 aa19.92■□□□□ 0.78
SCARF1-202ENST00000348987 TAC1P20366 129 aa19.92■□□□□ 0.78
SCARF1-202ENST00000348987 CTNNA2P26232 953 aa19.92■□□□□ 0.78
SCARF1-202ENST00000348987 CMPK2Q5EBM0 449 aa19.92■□□□□ 0.78
SCARF1-202ENST00000348987 PALB2Q86YC2 1186 aa19.92■□□□□ 0.78
Retrieved 100 of 20,778 RNA–protein pairs in 10.9 ms