RNA–Protein interactions for RNA: ENST00000348749.9

CHRNA1-202, Transcript of cholinergic receptor nicotinic alpha 1 subunit, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CHRNA1, Length 1,984 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHRNA1-202ENST00000348749 CPVLQ9H3G5 476 aa11.04□□□□□ -0.64
CHRNA1-202ENST00000348749 CDC42EP4Q9H3Q1 356 aaKnown RBP11.04□□□□□ -0.64
CHRNA1-202ENST00000348749 NKIRAS1Q9NYS0 192 aa11.04□□□□□ -0.64
CHRNA1-202ENST00000348749 SAP30BPQ9UHR5 308 aaKnown RBP11.04□□□□□ -0.64
CHRNA1-202ENST00000348749 MTMR7Q9Y216 660 aa11.04□□□□□ -0.64
CHRNA1-202ENST00000348749 ATF5Q9Y2D1 282 aaPredicted RBP11.04□□□□□ -0.64
CHRNA1-202ENST00000348749 RTCBQ9Y3I0 505 aaKnown RBP11.04□□□□□ -0.64
CHRNA1-202ENST00000348749 MIF4GDA9UHW6 222 aaKnown RBP11.03□□□□□ -0.64
CHRNA1-202ENST00000348749 ENTPD5O75356 428 aa11.03□□□□□ -0.64
CHRNA1-202ENST00000348749 RPS6KA4O75676 772 aa11.03□□□□□ -0.64
CHRNA1-202ENST00000348749 XRCC5P13010 732 aaKnown RBP11.03□□□□□ -0.64
CHRNA1-202ENST00000348749 LMNB1P20700 586 aa11.03□□□□□ -0.64
CHRNA1-202ENST00000348749 SLC12A3P55017 1021 aa11.03□□□□□ -0.64
CHRNA1-202ENST00000348749 HADHBP55084 474 aaKnown RBP11.03□□□□□ -0.64
CHRNA1-202ENST00000348749 IL9RQ01113 521 aa11.03□□□□□ -0.64
CHRNA1-202ENST00000348749 EPHA7Q15375 998 aa11.03□□□□□ -0.64
CHRNA1-202ENST00000348749 SLC4A8Q2Y0W8 1093 aa11.03□□□□□ -0.64
CHRNA1-202ENST00000348749 SNX30Q5VWJ9 437 aa11.03□□□□□ -0.64
CHRNA1-202ENST00000348749 TTC27Q6P3X3 843 aa11.03□□□□□ -0.64
CHRNA1-202ENST00000348749 C4orf50Q6ZRC1 276 aa11.03□□□□□ -0.64
CHRNA1-202ENST00000348749 RGS9BPQ6ZS82 235 aa11.03□□□□□ -0.64
CHRNA1-202ENST00000348749 NELFCDQ8IXH7 590 aa11.03□□□□□ -0.64
CHRNA1-202ENST00000348749 LNX1Q8TBB1 728 aaPredicted RBP11.03□□□□□ -0.64
CHRNA1-202ENST00000348749 ALG3Q92685 438 aa11.03□□□□□ -0.64
CHRNA1-202ENST00000348749 COA7Q96BR5 231 aa11.03□□□□□ -0.64
CHRNA1-202ENST00000348749 UBA5Q9GZZ9 404 aa11.03□□□□□ -0.64
CHRNA1-202ENST00000348749 DHX36Q9H2U1 1008 aaKnown RBP11.03□□□□□ -0.64
CHRNA1-202ENST00000348749 KANSL2Q9H9L4 492 aa11.03□□□□□ -0.64
CHRNA1-202ENST00000348749 MLXIPLQ9NP71 852 aa11.03□□□□□ -0.64
CHRNA1-202ENST00000348749 SIX2Q9NPC8 291 aa11.03□□□□□ -0.64
CHRNA1-202ENST00000348749 TYW1Q9NV66 732 aaKnown RBP11.03□□□□□ -0.64
CHRNA1-202ENST00000348749 LARSQ9P2J5 1176 aaKnown RBP11.03□□□□□ -0.64
CHRNA1-202ENST00000348749 PASKQ96RG2 1323 aa11.03□□□□□ -0.64
CHRNA1-202ENST00000348749 HGSO14964 777 aaPredicted RBP11.03□□□□□ -0.64
CHRNA1-202ENST00000348749 ZBTB5O15062 677 aa11.03□□□□□ -0.64
CHRNA1-202ENST00000348749 IL1R1P14778 569 aa11.03□□□□□ -0.64
CHRNA1-202ENST00000348749 FOXN2P32314 431 aa11.03□□□□□ -0.64
CHRNA1-202ENST00000348749 SERPINB4P48594 390 aa11.03□□□□□ -0.64
CHRNA1-202ENST00000348749 RHBDL3P58872 404 aa11.03□□□□□ -0.64
CHRNA1-202ENST00000348749 ZNF211Q13398 564 aaPredicted RBP11.03□□□□□ -0.64
CHRNA1-202ENST00000348749 MYBPC3Q14896 1274 aa11.03□□□□□ -0.64
CHRNA1-202ENST00000348749 CCDC6Q16204 474 aa11.03□□□□□ -0.64
CHRNA1-202ENST00000348749 CCDC137Q6PK04 289 aaKnown RBP11.03□□□□□ -0.64
CHRNA1-202ENST00000348749 BICDL1Q6ZP65 573 aa11.03□□□□□ -0.64
CHRNA1-202ENST00000348749 MIPOL1Q8TD10 442 aa11.03□□□□□ -0.64
CHRNA1-202ENST00000348749 SCG3Q8WXD2 468 aaKnown RBP11.03□□□□□ -0.64
CHRNA1-202ENST00000348749 CTNNBL1Q8WYA6 563 aaPredicted RBP11.03□□□□□ -0.64
CHRNA1-202ENST00000348749 HAPLN3Q96S86 360 aa11.03□□□□□ -0.64
CHRNA1-202ENST00000348749 JMJD4Q9H9V9 463 aa11.03□□□□□ -0.64
CHRNA1-202ENST00000348749 SAR1AQ9NR31 198 aa11.03□□□□□ -0.64
CHRNA1-202ENST00000348749 KIAA1024Q9UPX6 916 aa11.03□□□□□ -0.64
CHRNA1-202ENST00000348749 GREB1LQ9C091 1923 aaPredicted RBP11.02□□□□□ -0.64
CHRNA1-202ENST00000348749 KRT18P05783 430 aaKnown RBP11.02□□□□□ -0.65
CHRNA1-202ENST00000348749 STAT1P42224 750 aa11.02□□□□□ -0.65
CHRNA1-202ENST00000348749 GABPAQ06546 454 aa11.02□□□□□ -0.65
CHRNA1-202ENST00000348749 AP1B1Q10567 949 aa11.02□□□□□ -0.65
CHRNA1-202ENST00000348749 AP3B2Q13367 1082 aa11.02□□□□□ -0.65
CHRNA1-202ENST00000348749 LRRC74BQ6ZQY2 392 aa11.02□□□□□ -0.65
CHRNA1-202ENST00000348749 SYT2Q8N9I0 419 aaPredicted RBP11.02□□□□□ -0.65
CHRNA1-202ENST00000348749 NRG4Q8WWG1 115 aa11.02□□□□□ -0.65
CHRNA1-202ENST00000348749 VTI1AQ96AJ9 217 aa11.02□□□□□ -0.65
CHRNA1-202ENST00000348749 PSTPIP2Q9H939 334 aa11.02□□□□□ -0.65
CHRNA1-202ENST00000348749 DNAAF2Q9NVR5 837 aaKnown RBP11.02□□□□□ -0.65
CHRNA1-202ENST00000348749 DDX43Q9NXZ2 648 aaKnown RBP11.02□□□□□ -0.65
CHRNA1-202ENST00000348749 WHRNQ9P202 907 aa11.02□□□□□ -0.65
CHRNA1-202ENST00000348749 GMEB1Q9Y692 573 aa11.02□□□□□ -0.65
CHRNA1-202ENST00000348749 IGSF9BQ9UPX0 1349 aa11.01□□□□□ -0.65
CHRNA1-202ENST00000348749 ANKRD63C9JTQ0 380 aa11.01□□□□□ -0.65
CHRNA1-202ENST00000348749 E9PMD0 336 aa11.01□□□□□ -0.65
CHRNA1-202ENST00000348749 TTC4O95801 387 aa11.01□□□□□ -0.65
CHRNA1-202ENST00000348749 GAP43P17677 238 aa11.01□□□□□ -0.65
CHRNA1-202ENST00000348749 RFX1P22670 979 aa11.01□□□□□ -0.65
CHRNA1-202ENST00000348749 ATP2B4P23634 1241 aa11.01□□□□□ -0.65
CHRNA1-202ENST00000348749 COILP38432 576 aaPredicted RBP11.01□□□□□ -0.65
CHRNA1-202ENST00000348749 SLC34A1Q06495 639 aa11.01□□□□□ -0.65
CHRNA1-202ENST00000348749 USP4Q13107 963 aa11.01□□□□□ -0.65
CHRNA1-202ENST00000348749 TCEAL1Q15170 157 aa11.01□□□□□ -0.65
CHRNA1-202ENST00000348749 CNPY1Q3B7I2 92 aa11.01□□□□□ -0.65
CHRNA1-202ENST00000348749 KHDC1Q4VXA5 237 aaKnown RBP11.01□□□□□ -0.65
CHRNA1-202ENST00000348749 C11orf63Q6NUN7 778 aa11.01□□□□□ -0.65
CHRNA1-202ENST00000348749 RHBDF2Q6PJF5 856 aa11.01□□□□□ -0.65
CHRNA1-202ENST00000348749 ZC3H18Q86VM9 953 aaKnown RBP11.01□□□□□ -0.65
CHRNA1-202ENST00000348749 ADGRF4Q8IZF3 695 aa11.01□□□□□ -0.65
CHRNA1-202ENST00000348749 UBL4BQ8N7F7 174 aa11.01□□□□□ -0.65
CHRNA1-202ENST00000348749 PPFIBP2Q8ND30 876 aa11.01□□□□□ -0.65
CHRNA1-202ENST00000348749 STKLD1Q8NE28 680 aa11.01□□□□□ -0.65
CHRNA1-202ENST00000348749 C10orf82Q8WW14 230 aa11.01□□□□□ -0.65
CHRNA1-202ENST00000348749 SYT11Q9BT88 431 aa11.01□□□□□ -0.65
CHRNA1-202ENST00000348749 MKNK1Q9BUB5 465 aa11.01□□□□□ -0.65
CHRNA1-202ENST00000348749 SPATA16Q9BXB7 569 aa11.01□□□□□ -0.65
CHRNA1-202ENST00000348749 FGFBP2Q9BYJ0 223 aa11.01□□□□□ -0.65
CHRNA1-202ENST00000348749 AAASQ9NRG9 546 aa11.01□□□□□ -0.65
CHRNA1-202ENST00000348749 AJAP1Q9UKB5 411 aaPredicted RBP11.01□□□□□ -0.65
CHRNA1-202ENST00000348749 PHTF1Q9UMS5 762 aa11.01□□□□□ -0.65
CHRNA1-202ENST00000348749 DNM3Q9UQ16 869 aa11.01□□□□□ -0.65
CHRNA1-202ENST00000348749 SUGT1Q9Y2Z0 365 aa11.01□□□□□ -0.65
CHRNA1-202ENST00000348749 COMMD3-BMI1R4GMX3 469 aa11.01□□□□□ -0.65
CHRNA1-202ENST00000348749 UBE4BO95155 1302 aa11.01□□□□□ -0.65
CHRNA1-202ENST00000348749 ACSL3O95573 720 aa11.01□□□□□ -0.65
CHRNA1-202ENST00000348749 FAM163BP0C2L3 166 aa11.01□□□□□ -0.65
Retrieved 100 of 20,778 RNA–protein pairs in 29 ms