RNA–Protein interactions for RNA: ENST00000348225.6

PTN-201, Transcript of pleiotrophin, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene PTN, Length 1,614 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTN-201ENST00000348225 FAM49AQ9H0Q0 323 aaPredicted RBP20.23■□□□□ 0.83
PTN-201ENST00000348225 PTPRHQ9HD43 1115 aa20.23■□□□□ 0.83
PTN-201ENST00000348225 XPNPEP3Q9NQH7 507 aa20.23■□□□□ 0.83
PTN-201ENST00000348225 SAGE1Q9NXZ1 904 aa20.23■□□□□ 0.83
PTN-201ENST00000348225 ARHGAP20Q9P2F6 1191 aa20.23■□□□□ 0.83
PTN-201ENST00000348225 DNAJC12Q9UKB3 198 aa20.23■□□□□ 0.83
PTN-201ENST00000348225 COQ4Q9Y3A0 265 aa20.23■□□□□ 0.83
PTN-201ENST00000348225 B4GALT5O43286 388 aa20.22■□□□□ 0.83
PTN-201ENST00000348225 ERLIN2O94905 339 aa20.22■□□□□ 0.83
PTN-201ENST00000348225 PGK1P00558 417 aa20.22■□□□□ 0.83
PTN-201ENST00000348225 TNNI1P19237 187 aa20.22■□□□□ 0.83
PTN-201ENST00000348225 STAT1P42224 750 aa20.22■□□□□ 0.83
PTN-201ENST00000348225 ADAM17P78536 824 aa20.22■□□□□ 0.83
PTN-201ENST00000348225 MAPK8IP2Q13387 824 aaPredicted RBP20.22■□□□□ 0.83
PTN-201ENST00000348225 SURF1Q15526 300 aa20.22■□□□□ 0.83
PTN-201ENST00000348225 ZNF710Q8N1W2 664 aa20.22■□□□□ 0.83
PTN-201ENST00000348225 FBXL13Q8NEE6 735 aa20.22■□□□□ 0.83
PTN-201ENST00000348225 POP1Q99575 1024 aaKnown RBP20.22■□□□□ 0.83
PTN-201ENST00000348225 CGRRF1Q99675 332 aa20.22■□□□□ 0.83
PTN-201ENST00000348225 GCOM2Q9BZD3 368 aaPredicted RBP20.22■□□□□ 0.83
PTN-201ENST00000348225 TOPORSQ9NS56 1045 aaPredicted RBP20.22■□□□□ 0.83
PTN-201ENST00000348225 BZW2Q9Y6E2 419 aaKnown RBP20.22■□□□□ 0.83
PTN-201ENST00000348225 FAM189A1O60320 539 aa20.21■□□□□ 0.83
PTN-201ENST00000348225 FKTNO75072 461 aa20.21■□□□□ 0.83
PTN-201ENST00000348225 IQCF3P0C7M6 154 aa20.21■□□□□ 0.83
PTN-201ENST00000348225 CCND3P30281 292 aaPredicted RBP20.21■□□□□ 0.83
PTN-201ENST00000348225 SPA17Q15506 151 aa20.21■□□□□ 0.83
PTN-201ENST00000348225 AMHR2Q16671 573 aa20.21■□□□□ 0.83
PTN-201ENST00000348225 ZBTB41Q5SVQ8 909 aa20.21■□□□□ 0.83
PTN-201ENST00000348225 GJB7Q6PEY0 223 aa20.21■□□□□ 0.83
PTN-201ENST00000348225 SV2AQ7L0J3 742 aa20.21■□□□□ 0.83
PTN-201ENST00000348225 PXYLP1Q8TE99 480 aa20.21■□□□□ 0.83
PTN-201ENST00000348225 PDE11AQ9HCR9 933 aa20.21■□□□□ 0.83
PTN-201ENST00000348225 HDAC6Q9UBN7 1215 aa20.21■□□□□ 0.83
PTN-201ENST00000348225 AKR1B10O60218 316 aa20.2■□□□□ 0.82
PTN-201ENST00000348225 ADAMTS4O75173 837 aa20.2■□□□□ 0.82
PTN-201ENST00000348225 CCDC172P0C7W6 258 aa20.2■□□□□ 0.82
PTN-201ENST00000348225 MCF2P10911 925 aa20.2■□□□□ 0.82
PTN-201ENST00000348225 FERP16591 822 aa20.2■□□□□ 0.82
PTN-201ENST00000348225 HOXC8P31273 242 aa20.2■□□□□ 0.82
PTN-201ENST00000348225 EIF4A3P38919 411 aaKnown RBP20.2■□□□□ 0.82
PTN-201ENST00000348225 KIF11P52732 1056 aa20.2■□□□□ 0.82
PTN-201ENST00000348225 AP3M2P53677 418 aa20.2■□□□□ 0.82
PTN-201ENST00000348225 KLHL30Q0D2K2 578 aa20.2■□□□□ 0.82
PTN-201ENST00000348225 PCBP1Q15365 356 aaKnown RBP eCLIP20.2■□□□□ 0.82
PTN-201ENST00000348225 HGSNATQ68CP4 663 aa20.2■□□□□ 0.82
PTN-201ENST00000348225 CDT1Q9H211 546 aa20.2■□□□□ 0.82
PTN-201ENST00000348225 ADAMTS10Q9H324 1103 aa20.2■□□□□ 0.82
PTN-201ENST00000348225 RAB20Q9NX57 234 aa20.2■□□□□ 0.82
PTN-201ENST00000348225 F8VZ95 297 aa20.2■□□□□ 0.82
PTN-201ENST00000348225 TREHO43280 583 aa20.2■□□□□ 0.82
PTN-201ENST00000348225 PLEKP08567 350 aaPredicted RBP20.2■□□□□ 0.82
PTN-201ENST00000348225 PRMT2P55345 433 aa20.2■□□□□ 0.82
PTN-201ENST00000348225 NCBP1Q09161 790 aaKnown RBP20.2■□□□□ 0.82
PTN-201ENST00000348225 KYAT1Q16773 422 aa20.2■□□□□ 0.82
PTN-201ENST00000348225 KIZQ2M2Z5 673 aa20.2■□□□□ 0.82
PTN-201ENST00000348225 ARHGAP29Q52LW3 1261 aa20.2■□□□□ 0.82
PTN-201ENST00000348225 MAP3K21Q5TCX8 1036 aa20.2■□□□□ 0.82
PTN-201ENST00000348225 EEF1DP3Q658K8 133 aa20.2■□□□□ 0.82
PTN-201ENST00000348225 PHLDB3Q6NSJ2 640 aa20.2■□□□□ 0.82
PTN-201ENST00000348225 RUFY4Q6ZNE9 571 aa20.2■□□□□ 0.82
PTN-201ENST00000348225 C15orf39Q6ZRI6 1047 aa20.2■□□□□ 0.82
PTN-201ENST00000348225 NME8Q8N427 588 aa20.2■□□□□ 0.82
PTN-201ENST00000348225 AJAP1Q9UKB5 411 aaPredicted RBP20.2■□□□□ 0.82
PTN-201ENST00000348225 CPSF3Q9UKF6 684 aaKnown RBP20.2■□□□□ 0.82
PTN-201ENST00000348225 SCN10AQ9Y5Y9 1956 aa20.2■□□□□ 0.82
PTN-201ENST00000348225 TSPAN1O60635 241 aa20.19■□□□□ 0.82
PTN-201ENST00000348225 ZC3H11AO75152 810 aaKnown RBP eCLIP20.19■□□□□ 0.82
PTN-201ENST00000348225 GPR32O75388 356 aa20.19■□□□□ 0.82
PTN-201ENST00000348225 ANXA13P27216 316 aa20.19■□□□□ 0.82
PTN-201ENST00000348225 CST5P28325 142 aaPredicted RBP20.19■□□□□ 0.82
PTN-201ENST00000348225 SOX5P35711 763 aa20.19■□□□□ 0.82
PTN-201ENST00000348225 TNFSF9P41273 254 aa20.19■□□□□ 0.82
PTN-201ENST00000348225 PRKCIP41743 596 aa20.19■□□□□ 0.82
PTN-201ENST00000348225 HTRA3P83110 453 aa20.19■□□□□ 0.82
PTN-201ENST00000348225 ARID5AQ03989 594 aa20.19■□□□□ 0.82
PTN-201ENST00000348225 DRAP1Q14919 205 aaPredicted RBP20.19■□□□□ 0.82
PTN-201ENST00000348225 ZACNQ401N2 412 aa20.19■□□□□ 0.82
PTN-201ENST00000348225 SEZ6Q53EL9 994 aa20.19■□□□□ 0.82
PTN-201ENST00000348225 TAF2Q6P1X5 1199 aa20.19■□□□□ 0.82
PTN-201ENST00000348225 CXCL17Q6UXB2 119 aa20.19■□□□□ 0.82
PTN-201ENST00000348225 APBB1IPQ7Z5R6 666 aaPredicted RBP20.19■□□□□ 0.82
PTN-201ENST00000348225 WDR49Q8IV35 697 aa20.19■□□□□ 0.82
PTN-201ENST00000348225 TXLNBQ8N3L3 684 aa20.19■□□□□ 0.82
PTN-201ENST00000348225 TAS1R2Q8TE23 839 aa20.19■□□□□ 0.82
PTN-201ENST00000348225 PPP1R13LQ8WUF5 828 aa20.19■□□□□ 0.82
PTN-201ENST00000348225 FAM81BQ96LP2 452 aa20.19■□□□□ 0.82
PTN-201ENST00000348225 NT5C1BQ96P26 610 aa20.19■□□□□ 0.82
PTN-201ENST00000348225 PDZD7Q9H5P4 517 aa20.19■□□□□ 0.82
PTN-201ENST00000348225 UBE2TQ9NPD8 197 aaPredicted RBP20.19■□□□□ 0.82
PTN-201ENST00000348225 CSDE1O75534 798 aaKnown RBP20.18■□□□□ 0.82
PTN-201ENST00000348225 LCA5LO95447 670 aa20.18■□□□□ 0.82
PTN-201ENST00000348225 ARF4P18085 180 aaPredicted RBP20.18■□□□□ 0.82
PTN-201ENST00000348225 POU5F1Q01860 360 aaKnown RBP20.18■□□□□ 0.82
PTN-201ENST00000348225 BIRC3Q13489 604 aa20.18■□□□□ 0.82
PTN-201ENST00000348225 HIC1Q14526 733 aa20.18■□□□□ 0.82
PTN-201ENST00000348225 IRF2BP2Q7Z5L9 587 aa20.18■□□□□ 0.82
PTN-201ENST00000348225 KIAA1328Q86T90 577 aa20.18■□□□□ 0.82
PTN-201ENST00000348225 SLAIN1Q8ND83 568 aa20.18■□□□□ 0.82
PTN-201ENST00000348225 DNAJB3Q8WWF6 145 aa20.18■□□□□ 0.82
Retrieved 100 of 20,778 RNA–protein pairs in 36 ms