RNA–Protein interactions for RNA: ENST00000347613.8

CLCN3-201, Transcript of chloride voltage-gated channel 3, humanhuman

APPRIS P4 TSL 1 (best) BASIC

Gene CLCN3, Length 3,635 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLCN3-201ENST00000347613 HS2ST1Q7LGA3 356 aa6.5□□□□□ -1.37
CLCN3-201ENST00000347613 XXYLT1Q8NBI6 393 aa6.5□□□□□ -1.37
CLCN3-201ENST00000347613 REPS2Q8NFH8 660 aa6.5□□□□□ -1.37
CLCN3-201ENST00000347613 CTNNBL1Q8WYA6 563 aaPredicted RBP6.5□□□□□ -1.37
CLCN3-201ENST00000347613 RMDN3Q96TC7 470 aa6.5□□□□□ -1.37
CLCN3-201ENST00000347613 ZSWIM1Q9BR11 485 aa6.5□□□□□ -1.37
CLCN3-201ENST00000347613 NUP85Q9BW27 656 aa6.5□□□□□ -1.37
CLCN3-201ENST00000347613 RPAP3Q9H6T3 665 aaPredicted RBP6.5□□□□□ -1.37
CLCN3-201ENST00000347613 DENND3A2RUS2 1198 aa6.5□□□□□ -1.37
CLCN3-201ENST00000347613 E7EVH7 732 aa6.5□□□□□ -1.37
CLCN3-201ENST00000347613 VWA5AO00534 786 aa6.5□□□□□ -1.37
CLCN3-201ENST00000347613 PLA2G6O60733 806 aa6.5□□□□□ -1.37
CLCN3-201ENST00000347613 BCRP11274 1271 aa6.5□□□□□ -1.37
CLCN3-201ENST00000347613 KCNA2P16389 499 aa6.5□□□□□ -1.37
CLCN3-201ENST00000347613 IVDP26440 423 aa6.5□□□□□ -1.37
CLCN3-201ENST00000347613 DSG3P32926 999 aa6.5□□□□□ -1.37
CLCN3-201ENST00000347613 ACOT2P49753 483 aa6.5□□□□□ -1.37
CLCN3-201ENST00000347613 NLRP11P59045 1033 aaKnown RBP6.5□□□□□ -1.37
CLCN3-201ENST00000347613 MPP2Q14168 576 aa6.5□□□□□ -1.37
CLCN3-201ENST00000347613 DNAJC14Q6Y2X3 702 aaPredicted RBP6.5□□□□□ -1.37
CLCN3-201ENST00000347613 CYP4X1Q8N118 509 aa6.5□□□□□ -1.37
CLCN3-201ENST00000347613 MICALL1Q8N3F8 863 aa6.5□□□□□ -1.37
CLCN3-201ENST00000347613 TTLL6Q8N841 843 aa6.5□□□□□ -1.37
CLCN3-201ENST00000347613 PRPF38AQ8NAV1 312 aaKnown RBP6.5□□□□□ -1.37
CLCN3-201ENST00000347613 SHC3Q92529 594 aa6.5□□□□□ -1.37
CLCN3-201ENST00000347613 GABBR1Q9UBS5 961 aa6.5□□□□□ -1.37
CLCN3-201ENST00000347613 MYPNQ86TC9 1320 aa6.5□□□□□ -1.37
CLCN3-201ENST00000347613 MAPTP10636 758 aaKnown RBP6.5□□□□□ -1.37
CLCN3-201ENST00000347613 HOXA7P31268 230 aaPredicted RBP6.5□□□□□ -1.37
CLCN3-201ENST00000347613 TMEM132BQ14DG7 1078 aa6.5□□□□□ -1.37
CLCN3-201ENST00000347613 TNIP1Q15025 636 aa6.5□□□□□ -1.37
CLCN3-201ENST00000347613 TXNRD3NBQ6F5E7 133 aa6.5□□□□□ -1.37
CLCN3-201ENST00000347613 SWSAP1Q6NVH7 229 aa6.5□□□□□ -1.37
CLCN3-201ENST00000347613 PASD1Q8IV76 773 aa6.5□□□□□ -1.37
CLCN3-201ENST00000347613 TLCD1Q96CP7 247 aa6.5□□□□□ -1.37
CLCN3-201ENST00000347613 KLHL11Q9NVR0 708 aa6.5□□□□□ -1.37
CLCN3-201ENST00000347613 SEL1LQ9UBV2 794 aa6.5□□□□□ -1.37
CLCN3-201ENST00000347613 GGT7Q9UJ14 662 aa6.5□□□□□ -1.37
CLCN3-201ENST00000347613 NFKBIEO00221 500 aa6.49□□□□□ -1.37
CLCN3-201ENST00000347613 TRAPPC3O43617 180 aa6.49□□□□□ -1.37
CLCN3-201ENST00000347613 PIAS1O75925 651 aa6.49□□□□□ -1.37
CLCN3-201ENST00000347613 UNGP13051 313 aaPredicted RBP6.49□□□□□ -1.37
CLCN3-201ENST00000347613 RRM1P23921 792 aa6.49□□□□□ -1.37
CLCN3-201ENST00000347613 TAS2R40P59535 323 aa6.49□□□□□ -1.37
CLCN3-201ENST00000347613 MCCD1P59942 119 aaPredicted RBP6.49□□□□□ -1.37
CLCN3-201ENST00000347613 GPC5P78333 572 aa6.49□□□□□ -1.37
CLCN3-201ENST00000347613 SETQ01105 290 aaPredicted RBP6.49□□□□□ -1.37
CLCN3-201ENST00000347613 CUL1Q13616 776 aa6.49□□□□□ -1.37
CLCN3-201ENST00000347613 CCDC137Q6PK04 289 aaKnown RBP6.49□□□□□ -1.37
CLCN3-201ENST00000347613 GOLGA6L1Q8N7Z2 621 aa6.49□□□□□ -1.37
CLCN3-201ENST00000347613 TMEM143Q96AN5 459 aa6.49□□□□□ -1.37
CLCN3-201ENST00000347613 CYFIP2Q96F07 1278 aa6.49□□□□□ -1.37
CLCN3-201ENST00000347613 ZNF668Q96K58 619 aaPredicted RBP6.49□□□□□ -1.37
CLCN3-201ENST00000347613 FAM213AQ9BRX8 229 aa6.49□□□□□ -1.37
CLCN3-201ENST00000347613 CARD9Q9H257 536 aa6.49□□□□□ -1.37
CLCN3-201ENST00000347613 AZI2Q9H6S1 392 aa6.49□□□□□ -1.37
CLCN3-201ENST00000347613 MLXIPLQ9NP71 852 aa6.49□□□□□ -1.37
CLCN3-201ENST00000347613 CST3P01034 146 aaPredicted RBP6.49□□□□□ -1.37
CLCN3-201ENST00000347613 KRT13P13646 458 aa6.49□□□□□ -1.37
CLCN3-201ENST00000347613 MXI1P50539 228 aa6.49□□□□□ -1.37
CLCN3-201ENST00000347613 CNTN2Q02246 1040 aa6.49□□□□□ -1.37
CLCN3-201ENST00000347613 GHRHRQ02643 423 aa6.49□□□□□ -1.37
CLCN3-201ENST00000347613 IFT88Q13099 833 aa6.49□□□□□ -1.37
CLCN3-201ENST00000347613 TDRD10Q5VZ19 366 aaKnown RBP6.49□□□□□ -1.37
CLCN3-201ENST00000347613 INTS8Q75QN2 995 aaKnown RBP6.49□□□□□ -1.37
CLCN3-201ENST00000347613 TADA2BQ86TJ2 420 aa6.49□□□□□ -1.37
CLCN3-201ENST00000347613 OGFOD1Q8N543 542 aa6.49□□□□□ -1.37
CLCN3-201ENST00000347613 ATXN2LQ8WWM7 1075 aaKnown RBP6.49□□□□□ -1.37
CLCN3-201ENST00000347613 ACSF2Q96CM8 615 aaPredicted RBP6.49□□□□□ -1.37
CLCN3-201ENST00000347613 ACCSQ96QU6 501 aa6.49□□□□□ -1.37
CLCN3-201ENST00000347613 CEP89Q96ST8 783 aa6.49□□□□□ -1.37
CLCN3-201ENST00000347613 RUFY1Q96T51 708 aa6.49□□□□□ -1.37
CLCN3-201ENST00000347613 HEMGNQ9BXL5 484 aa6.49□□□□□ -1.37
CLCN3-201ENST00000347613 ADAM33Q9BZ11 813 aa6.49□□□□□ -1.37
CLCN3-201ENST00000347613 C10orf88Q9H8K7 445 aa6.49□□□□□ -1.37
CLCN3-201ENST00000347613 CWC15Q9P013 229 aaKnown RBP6.49□□□□□ -1.37
CLCN3-201ENST00000347613 ZNF214Q9UL59 606 aaPredicted RBP6.49□□□□□ -1.37
CLCN3-201ENST00000347613 ZNRF3Q9ULT6 936 aa6.49□□□□□ -1.37
CLCN3-201ENST00000347613 RPS6KL1Q9Y6S9 549 aa6.49□□□□□ -1.37
CLCN3-201ENST00000347613 TLDC2A0PJX2 215 aa6.49□□□□□ -1.37
CLCN3-201ENST00000347613 RTN2O75298 545 aa6.49□□□□□ -1.37
CLCN3-201ENST00000347613 GH1P01241 217 aa6.49□□□□□ -1.37
CLCN3-201ENST00000347613 CYP1A2P05177 515 aa6.49□□□□□ -1.37
CLCN3-201ENST00000347613 MYZAPP0CAP1 466 aa6.49□□□□□ -1.37
CLCN3-201ENST00000347613 ETS1P14921 441 aa6.49□□□□□ -1.37
CLCN3-201ENST00000347613 PRKG1Q13976 671 aa6.49□□□□□ -1.37
CLCN3-201ENST00000347613 C15orf39Q6ZRI6 1047 aa6.49□□□□□ -1.37
CLCN3-201ENST00000347613 FAM160B2Q86V87 743 aa6.49□□□□□ -1.37
CLCN3-201ENST00000347613 VSIG10LQ86VR7 867 aa6.49□□□□□ -1.37
CLCN3-201ENST00000347613 MAP4K3Q8IVH8 894 aa6.49□□□□□ -1.37
CLCN3-201ENST00000347613 C4orf19Q8IY42 314 aa6.49□□□□□ -1.37
CLCN3-201ENST00000347613 OR5B17Q8NGF7 314 aa6.49□□□□□ -1.37
CLCN3-201ENST00000347613 ZNF564Q8TBZ8 553 aaPredicted RBP6.49□□□□□ -1.37
CLCN3-201ENST00000347613 TMEM174Q8WUU8 243 aa6.49□□□□□ -1.37
CLCN3-201ENST00000347613 MFSD14AQ96MC6 490 aa6.49□□□□□ -1.37
CLCN3-201ENST00000347613 FBXL18Q96ME1 805 aa6.49□□□□□ -1.37
CLCN3-201ENST00000347613 FMO2Q99518 471 aa6.49□□□□□ -1.37
CLCN3-201ENST00000347613 SLITRK6Q9H5Y7 841 aa6.49□□□□□ -1.37
CLCN3-201ENST00000347613 LUC7LQ9NQ29 371 aaKnown RBP6.49□□□□□ -1.37
CLCN3-201ENST00000347613 RAB20Q9NX57 234 aa6.49□□□□□ -1.37
Retrieved 100 of 20,778 RNA–protein pairs in 20 ms