RNA–Protein interactions for RNA: ENST00000343805.10

SP140-201, Transcript of SP140 nuclear body protein, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene SP140, Length 2,910 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SP140-201ENST00000343805 DYDC1Q8WWB3 177 aa9.37□□□□□ -0.91
SP140-201ENST00000343805 IFIH1Q9BYX4 1025 aaKnown RBP9.37□□□□□ -0.91
SP140-201ENST00000343805 C12orf49Q9H741 205 aa9.37□□□□□ -0.91
SP140-201ENST00000343805 VCX3AQ9NNX9 186 aa9.37□□□□□ -0.91
SP140-201ENST00000343805 CDKN2AIPQ9NXV6 580 aaPredicted RBP9.37□□□□□ -0.91
SP140-201ENST00000343805 CAPN6Q9Y6Q1 641 aa9.37□□□□□ -0.91
SP140-201ENST00000343805 AHDC1Q5TGY3 1603 aaPredicted RBP9.37□□□□□ -0.91
SP140-201ENST00000343805 A0A1B0GUL6 1792 aa9.37□□□□□ -0.91
SP140-201ENST00000343805 PFDN1O60925 122 aa9.37□□□□□ -0.91
SP140-201ENST00000343805 ALADP13716 330 aa9.37□□□□□ -0.91
SP140-201ENST00000343805 SNAP25P60880 206 aa9.37□□□□□ -0.91
SP140-201ENST00000343805 ARSIQ5FYB1 569 aa9.37□□□□□ -0.91
SP140-201ENST00000343805 MIIPQ5JXC2 388 aa9.37□□□□□ -0.91
SP140-201ENST00000343805 C3orf62Q6ZUJ4 267 aa9.37□□□□□ -0.91
SP140-201ENST00000343805 DNAAF5Q86Y56 855 aa9.37□□□□□ -0.91
SP140-201ENST00000343805 PPP1R14CQ8TAE6 165 aa9.37□□□□□ -0.91
SP140-201ENST00000343805 COG1Q8WTW3 980 aa9.37□□□□□ -0.91
SP140-201ENST00000343805 LARP4BQ92615 738 aaKnown RBP9.37□□□□□ -0.91
SP140-201ENST00000343805 LEMD3Q9Y2U8 911 aa9.37□□□□□ -0.91
SP140-201ENST00000343805 SAMM50Q9Y512 469 aa9.37□□□□□ -0.91
SP140-201ENST00000343805 NPHP3-ACAD11A0A0J9YXS1 232 aa9.36□□□□□ -0.91
SP140-201ENST00000343805 IQCA1LA6NCM1 817 aa9.36□□□□□ -0.91
SP140-201ENST00000343805 TRAF5O00463 557 aa9.36□□□□□ -0.91
SP140-201ENST00000343805 SLC26A4O43511 780 aa9.36□□□□□ -0.91
SP140-201ENST00000343805 USO1O60763 962 aaKnown RBP9.36□□□□□ -0.91
SP140-201ENST00000343805 MTA2O94776 668 aa9.36□□□□□ -0.91
SP140-201ENST00000343805 AKR1B1P15121 316 aa9.36□□□□□ -0.91
SP140-201ENST00000343805 CLK1P49759 484 aaKnown RBP9.36□□□□□ -0.91
SP140-201ENST00000343805 CACNB3P54284 484 aa9.36□□□□□ -0.91
SP140-201ENST00000343805 RASSF7Q02833 373 aa9.36□□□□□ -0.91
SP140-201ENST00000343805 GFPT1Q06210 699 aaPredicted RBP9.36□□□□□ -0.91
SP140-201ENST00000343805 GRB10Q13322 594 aa9.36□□□□□ -0.91
SP140-201ENST00000343805 C4orf46Q504U0 113 aa9.36□□□□□ -0.91
SP140-201ENST00000343805 C10orf62Q5T681 223 aaPredicted RBP9.36□□□□□ -0.91
SP140-201ENST00000343805 CNNM4Q6P4Q7 775 aa9.36□□□□□ -0.91
SP140-201ENST00000343805 NFRKBQ6P4R8 1299 aa9.36□□□□□ -0.91
SP140-201ENST00000343805 CCBE1Q6UXH8 406 aaPredicted RBP9.36□□□□□ -0.91
SP140-201ENST00000343805 ACMSDQ8TDX5 336 aa9.36□□□□□ -0.91
SP140-201ENST00000343805 INO80BQ9C086 356 aaPredicted RBP9.36□□□□□ -0.91
SP140-201ENST00000343805 NDST4Q9H3R1 872 aa9.36□□□□□ -0.91
SP140-201ENST00000343805 ARHGAP20Q9P2F6 1191 aa9.36□□□□□ -0.91
SP140-201ENST00000343805 DOLKQ9UPQ8 538 aa9.36□□□□□ -0.91
SP140-201ENST00000343805 A0A1W2PQC6 194 aa9.36□□□□□ -0.91
SP140-201ENST00000343805 LRRC53A6NM62 1247 aa9.36□□□□□ -0.91
SP140-201ENST00000343805 FLOT1O75955 427 aa9.36□□□□□ -0.91
SP140-201ENST00000343805 CFHP08603 1231 aa9.36□□□□□ -0.91
SP140-201ENST00000343805 TAL1P17542 331 aaPredicted RBP9.36□□□□□ -0.91
SP140-201ENST00000343805 GEMIN4P57678 1058 aaKnown RBP9.36□□□□□ -0.91
SP140-201ENST00000343805 ELF3P78545 371 aaPredicted RBP9.36□□□□□ -0.91
SP140-201ENST00000343805 TCP10Q12799 353 aa9.36□□□□□ -0.91
SP140-201ENST00000343805 ADAM9Q13443 819 aa9.36□□□□□ -0.91
SP140-201ENST00000343805 DOK7Q18PE1 504 aa9.36□□□□□ -0.91
SP140-201ENST00000343805 SHROOM1Q2M3G4 852 aaPredicted RBP9.36□□□□□ -0.91
SP140-201ENST00000343805 KIFAP3Q92845 792 aa9.36□□□□□ -0.91
SP140-201ENST00000343805 AZIN2Q96A70 460 aa9.36□□□□□ -0.91
SP140-201ENST00000343805 TSPAN10Q9H1Z9 355 aaPredicted RBP9.36□□□□□ -0.91
SP140-201ENST00000343805 AS3MTQ9HBK9 375 aa9.36□□□□□ -0.91
SP140-201ENST00000343805 ZNF287Q9HBT7 754 aa9.36□□□□□ -0.91
SP140-201ENST00000343805 BLOC1S4Q9NUP1 217 aa9.36□□□□□ -0.91
SP140-201ENST00000343805 PCDHB2Q9Y5E7 798 aa9.36□□□□□ -0.91
SP140-201ENST00000343805 COL14A1Q05707 1796 aaKnown RBP9.36□□□□□ -0.91
SP140-201ENST00000343805 PSMD14O00487 310 aa9.35□□□□□ -0.91
SP140-201ENST00000343805 CLTAP09496 248 aa9.35□□□□□ -0.91
SP140-201ENST00000343805 XRCC5P13010 732 aaKnown RBP9.35□□□□□ -0.91
SP140-201ENST00000343805 S100A1P23297 94 aa9.35□□□□□ -0.91
SP140-201ENST00000343805 VARSP26640 1264 aaKnown RBP9.35□□□□□ -0.91
SP140-201ENST00000343805 GUCY2FP51841 1108 aa9.35□□□□□ -0.91
SP140-201ENST00000343805 USP14P54578 494 aa9.35□□□□□ -0.91
SP140-201ENST00000343805 GNGT1P63211 74 aa9.35□□□□□ -0.91
SP140-201ENST00000343805 PLCB3Q01970 1234 aa9.35□□□□□ -0.91
SP140-201ENST00000343805 TRIM71Q2Q1W2 868 aaKnown RBP9.35□□□□□ -0.91
SP140-201ENST00000343805 KRT79Q5XKE5 535 aa9.35□□□□□ -0.91
SP140-201ENST00000343805 SLC2A7Q6PXP3 512 aa9.35□□□□□ -0.91
SP140-201ENST00000343805 USP17L6PQ6QN14 398 aa9.35□□□□□ -0.91
SP140-201ENST00000343805 CCDC81Q6ZN84 652 aa9.35□□□□□ -0.91
SP140-201ENST00000343805 NEDD1Q8NHV4 660 aa9.35□□□□□ -0.91
SP140-201ENST00000343805 PNMA5Q96PV4 448 aa9.35□□□□□ -0.91
SP140-201ENST00000343805 HNRNPUL1Q9BUJ2 856 aaKnown RBP eCLIP9.35□□□□□ -0.91
SP140-201ENST00000343805 FGFBP2Q9BYJ0 223 aa9.35□□□□□ -0.91
SP140-201ENST00000343805 SUCLA2Q9P2R7 463 aaPredicted RBP9.35□□□□□ -0.91
SP140-201ENST00000343805 GGA1Q9UJY5 639 aa9.35□□□□□ -0.91
SP140-201ENST00000343805 TMCC3Q9ULS5 477 aa9.35□□□□□ -0.91
SP140-201ENST00000343805 NOD1Q9Y239 953 aa9.35□□□□□ -0.91
SP140-201ENST00000343805 GOLGA6L10A0A0M3HER8 536 aa9.35□□□□□ -0.91
SP140-201ENST00000343805 E9PMD0 336 aa9.35□□□□□ -0.91
SP140-201ENST00000343805 HSPA1AP0DMV8 641 aaKnown RBP9.35□□□□□ -0.91
SP140-201ENST00000343805 HSPA1BP0DMV9 641 aaKnown RBP9.35□□□□□ -0.91
SP140-201ENST00000343805 GHRP10912 638 aa9.35□□□□□ -0.91
SP140-201ENST00000343805 CCNCP24863 283 aa9.35□□□□□ -0.91
SP140-201ENST00000343805 MAGEA1P43355 309 aa9.35□□□□□ -0.91
SP140-201ENST00000343805 ADCY7P51828 1080 aa9.35□□□□□ -0.91
SP140-201ENST00000343805 KIF11P52732 1056 aa9.35□□□□□ -0.91
SP140-201ENST00000343805 LMNB2Q03252 620 aa9.35□□□□□ -0.91
SP140-201ENST00000343805 TMEM266Q2M3C6 531 aa9.35□□□□□ -0.91
SP140-201ENST00000343805 VWA3BQ502W6 1294 aa9.35□□□□□ -0.91
SP140-201ENST00000343805 ZNF362Q5T0B9 420 aaPredicted RBP9.35□□□□□ -0.91
SP140-201ENST00000343805 PRR5LQ6MZQ0 368 aa9.35□□□□□ -0.91
SP140-201ENST00000343805 SAMD14Q8IZD0 417 aaPredicted RBP9.35□□□□□ -0.91
SP140-201ENST00000343805 SCG3Q8WXD2 468 aaKnown RBP9.35□□□□□ -0.91
SP140-201ENST00000343805 CENPTQ96BT3 561 aa9.35□□□□□ -0.91
Retrieved 100 of 20,778 RNA–protein pairs in 35.9 ms