RNA–Protein interactions for RNA: ENST00000342075.8

PMS1-201, Transcript of PMS1 homolog 1, mismatch repair system component, humanhuman

TSL 2

Gene PMS1, Length 3,012 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PMS1-201ENST00000342075 AGPAT5Q9NUQ2 364 aa15.1■□□□□ 0.01
PMS1-201ENST00000342075 AJAP1Q9UKB5 411 aaPredicted RBP15.1■□□□□ 0.01
PMS1-201ENST00000342075 TRPV2Q9Y5S1 764 aa15.1■□□□□ 0.01
PMS1-201ENST00000342075 SCN5AQ14524 2016 aa15.1■□□□□ 0.01
PMS1-201ENST00000342075 A0A1B0GUA9 196 aa15.09■□□□□ 0.01
PMS1-201ENST00000342075 CKBP12277 381 aa15.09■□□□□ 0.01
PMS1-201ENST00000342075 ENOX2Q16206 610 aaKnown RBP15.09■□□□□ 0.01
PMS1-201ENST00000342075 FAM126BQ8IXS8 530 aa15.09■□□□□ 0.01
PMS1-201ENST00000342075 NXF3Q9H4D5 531 aaKnown RBP15.09■□□□□ 0.01
PMS1-201ENST00000342075 CGNQ9P2M7 1197 aaKnown RBP15.09■□□□□ 0.01
PMS1-201ENST00000342075 CITO14578 2027 aa15.09■□□□□ 0.01
PMS1-201ENST00000342075 ZNF233A6NK53 670 aa15.09■□□□□ 0.01
PMS1-201ENST00000342075 MEIS3P2A8K0S8 358 aa15.09■□□□□ 0.01
PMS1-201ENST00000342075 TPM3P06753 285 aa15.09■□□□□ 0.01
PMS1-201ENST00000342075 FMO5P49326 533 aa15.09■□□□□ 0.01
PMS1-201ENST00000342075 CDK7P50613 346 aa15.09■□□□□ 0.01
PMS1-201ENST00000342075 TBX2Q13207 712 aaPredicted RBP15.09■□□□□ 0.01
PMS1-201ENST00000342075 INTS8Q75QN2 995 aaKnown RBP15.09■□□□□ 0.01
PMS1-201ENST00000342075 OR5B17Q8NGF7 314 aa15.09■□□□□ 0.01
PMS1-201ENST00000342075 MFSD14AQ96MC6 490 aa15.09■□□□□ 0.01
PMS1-201ENST00000342075 METTL14Q9HCE5 456 aaKnown RBP15.09■□□□□ 0.01
PMS1-201ENST00000342075 ST3GAL5Q9UNP4 418 aa15.09■□□□□ 0.01
PMS1-201ENST00000342075 CDH23Q9H251 3354 aa15.09■□□□□ 0.01
PMS1-201ENST00000342075 TPM2P07951 284 aa15.09■□□□□ 0.01
PMS1-201ENST00000342075 KRT13P13646 458 aa15.09■□□□□ 0.01
PMS1-201ENST00000342075 AKAP5P24588 427 aa15.09■□□□□ 0.01
PMS1-201ENST00000342075 PTK7Q13308 1070 aa15.09■□□□□ 0.01
PMS1-201ENST00000342075 FKBP15Q5T1M5 1219 aa15.09■□□□□ 0.01
PMS1-201ENST00000342075 SLFN12LQ6IEE8 588 aa15.09■□□□□ 0.01
PMS1-201ENST00000342075 TRAF7Q6Q0C0 670 aa15.09■□□□□ 0.01
PMS1-201ENST00000342075 NME8Q8N427 588 aa15.09■□□□□ 0.01
PMS1-201ENST00000342075 PAWRQ96IZ0 340 aaKnown RBP15.09■□□□□ 0.01
PMS1-201ENST00000342075 LSM14BQ9BX40 385 aaKnown RBP15.09■□□□□ 0.01
PMS1-201ENST00000342075 MCOLN1Q9GZU1 580 aa15.09■□□□□ 0.01
PMS1-201ENST00000342075 TMEM117Q9H0C3 514 aa15.09■□□□□ 0.01
PMS1-201ENST00000342075 RNF39Q9H2S5 420 aa15.09■□□□□ 0.01
PMS1-201ENST00000342075 GCNT4Q9P109 453 aa15.09■□□□□ 0.01
PMS1-201ENST00000342075 TTC26A0AVF1 554 aa15.08■□□□□ 0
PMS1-201ENST00000342075 M0QZ92 97 aa15.08■□□□□ 0
PMS1-201ENST00000342075 OGTO15294 1046 aa15.08■□□□□ 0
PMS1-201ENST00000342075 SNRPFP62306 86 aaKnown RBP15.08■□□□□ 0
PMS1-201ENST00000342075 MYBPC2Q14324 1141 aa15.08■□□□□ 0
PMS1-201ENST00000342075 TRIM60Q495X7 471 aa15.08■□□□□ 0
PMS1-201ENST00000342075 TMEM174Q8WUU8 243 aa15.08■□□□□ 0
PMS1-201ENST00000342075 PRIMPOLQ96LW4 560 aa15.08■□□□□ 0
PMS1-201ENST00000342075 CPSF3Q9UKF6 684 aaKnown RBP15.08■□□□□ 0
PMS1-201ENST00000342075 MGEA5O60502 916 aa15.08■□□□□ 0
PMS1-201ENST00000342075 RPS6KA5O75582 802 aa15.08■□□□□ 0
PMS1-201ENST00000342075 STAG3L1P0CL83 205 aa15.08■□□□□ 0
PMS1-201ENST00000342075 PNMA6AP0CW24 399 aaPredicted RBP15.08■□□□□ 0
PMS1-201ENST00000342075 SFPQP23246 707 aaKnown RBP eCLIP15.08■□□□□ 0
PMS1-201ENST00000342075 LPIN1Q14693 890 aa15.08■□□□□ 0
PMS1-201ENST00000342075 SEMA4DQ92854 862 aa15.08■□□□□ 0
PMS1-201ENST00000342075 PI4K2AQ9BTU6 479 aa15.08■□□□□ 0
PMS1-201ENST00000342075 NLRC4Q9NPP4 1024 aa15.08■□□□□ 0
PMS1-201ENST00000342075 SNTG2Q9NY99 539 aa15.08■□□□□ 0
PMS1-201ENST00000342075 NOL4O94818 638 aa15.07■□□□□ 0
PMS1-201ENST00000342075 ABCD1P33897 745 aa15.07■□□□□ 0
PMS1-201ENST00000342075 DPY19L2P1Q6NXN4 242 aa15.07■□□□□ 0
PMS1-201ENST00000342075 RSPH3Q86UC2 560 aa15.07■□□□□ 0
PMS1-201ENST00000342075 ERGIC2Q96RQ1 377 aa15.07■□□□□ 0
PMS1-201ENST00000342075 TNNI1P19237 187 aa15.07■□□□□ 0
PMS1-201ENST00000342075 TRIM21P19474 475 aaKnown RBP15.07■□□□□ 0
PMS1-201ENST00000342075 PON1P27169 355 aa15.07■□□□□ 0
PMS1-201ENST00000342075 GJA8P48165 433 aa15.07■□□□□ 0
PMS1-201ENST00000342075 GUCY2FP51841 1108 aa15.07■□□□□ 0
PMS1-201ENST00000342075 MYL7Q01449 175 aa15.07■□□□□ 0
PMS1-201ENST00000342075 FBXO47Q5MNV8 452 aa15.07■□□□□ 0
PMS1-201ENST00000342075 UBXN11Q5T124 520 aa15.07■□□□□ 0
PMS1-201ENST00000342075 E4F1Q66K89 784 aaPredicted RBP15.07■□□□□ 0
PMS1-201ENST00000342075 SLC39A5Q6ZMH5 540 aa15.07■□□□□ 0
PMS1-201ENST00000342075 EFCAB13Q8IY85 973 aa15.07■□□□□ 0
PMS1-201ENST00000342075 TC2NQ8N9U0 490 aa15.07■□□□□ 0
PMS1-201ENST00000342075 TAS1R2Q8TE23 839 aa15.07■□□□□ 0
PMS1-201ENST00000342075 KLK14Q9P0G3 267 aa15.07■□□□□ 0
PMS1-201ENST00000342075 PADI3Q9ULW8 664 aa15.07■□□□□ 0
PMS1-201ENST00000342075 GLRA4Q5JXX5 417 aa15.06■□□□□ 0
PMS1-201ENST00000342075 SCLYQ96I15 445 aa15.06■□□□□ 0
PMS1-201ENST00000342075 PPP1R12CQ9BZL4 782 aa15.06■□□□□ 0
PMS1-201ENST00000342075 TTYH3Q9C0H2 523 aa15.06■□□□□ 0
PMS1-201ENST00000342075 MTMR12Q9C0I1 747 aa15.06■□□□□ 0
PMS1-201ENST00000342075 TMX1Q9H3N1 280 aa15.06■□□□□ 0
PMS1-201ENST00000342075 IGF2BP2Q9Y6M1 599 aaKnown RBP eCLIP15.06■□□□□ 0
PMS1-201ENST00000342075 FAM170AA1A519 330 aa15.06■□□□□ 0
PMS1-201ENST00000342075 NFICP08651 508 aa15.06■□□□□ 0
PMS1-201ENST00000342075 TWF2Q6IBS0 349 aaKnown RBP15.06■□□□□ 0
PMS1-201ENST00000342075 SV2AQ7L0J3 742 aa15.06■□□□□ 0
PMS1-201ENST00000342075 BRSK2Q8IWQ3 736 aa15.06■□□□□ 0
PMS1-201ENST00000342075 C17orf53Q8N3J3 647 aaPredicted RBP15.06■□□□□ 0
PMS1-201ENST00000342075 SIX2Q9NPC8 291 aa15.06■□□□□ 0
PMS1-201ENST00000342075 CD4P01730 458 aa15.06■□□□□ 0
PMS1-201ENST00000342075 AFF1P51825 1210 aaKnown RBP15.06■□□□□ 0
PMS1-201ENST00000342075 TLE2Q04725 743 aa15.06■□□□□ 0
PMS1-201ENST00000342075 PSMD6Q15008 389 aa15.06■□□□□ 0
PMS1-201ENST00000342075 EXOC3L4Q17RC7 722 aa15.06■□□□□ 0
PMS1-201ENST00000342075 SLC10A6Q3KNW5 377 aa15.06■□□□□ 0
PMS1-201ENST00000342075 TDRD10Q5VZ19 366 aaKnown RBP15.06■□□□□ 0
PMS1-201ENST00000342075 NOTUMQ6P988 496 aa15.06■□□□□ 0
PMS1-201ENST00000342075 LPPQ93052 612 aa15.06■□□□□ 0
PMS1-201ENST00000342075 ATP11BQ9Y2G3 1177 aa15.06■□□□□ 0
Retrieved 100 of 20,778 RNA–protein pairs in 40.7 ms