RNA–Protein interactions for RNA: ENST00000341316.6

SPG7-202, Transcript of SPG7, paraplegin matrix AAA peptidase subunit, humanhuman

TSL 1 (best) BASIC

Gene SPG7, Length 2,288 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPG7-202ENST00000341316 KDM7AQ6ZMT4 941 aa21.64■■□□□ 1.05
SPG7-202ENST00000341316 CPNE8Q86YQ8 564 aa21.64■■□□□ 1.05
SPG7-202ENST00000341316 EIF1ADQ8N9N8 165 aaKnown RBP21.64■■□□□ 1.05
SPG7-202ENST00000341316 FBXL13Q8NEE6 735 aa21.64■■□□□ 1.05
SPG7-202ENST00000341316 FAM213AQ9BRX8 229 aa21.64■■□□□ 1.05
SPG7-202ENST00000341316 PI4K2AQ9BTU6 479 aa21.64■■□□□ 1.05
SPG7-202ENST00000341316 TMEM110-MUSTN1A8MSY1 372 aa21.63■■□□□ 1.05
SPG7-202ENST00000341316 DAPK3O43293 454 aa21.63■■□□□ 1.05
SPG7-202ENST00000341316 CYP11B1P15538 503 aa21.63■■□□□ 1.05
SPG7-202ENST00000341316 FLT3P36888 993 aa21.63■■□□□ 1.05
SPG7-202ENST00000341316 CNTN2Q02246 1040 aa21.63■■□□□ 1.05
SPG7-202ENST00000341316 MTERF2Q49AM1 385 aa21.63■■□□□ 1.05
SPG7-202ENST00000341316 CD302Q8IX05 232 aa21.63■■□□□ 1.05
SPG7-202ENST00000341316 MCPH1Q8NEM0 835 aa21.63■■□□□ 1.05
SPG7-202ENST00000341316 ATP6V0A4Q9HBG4 840 aa21.63■■□□□ 1.05
SPG7-202ENST00000341316 ARHGAP28Q9P2N2 729 aa21.63■■□□□ 1.05
SPG7-202ENST00000341316 A6NNZ2 444 aa21.63■■□□□ 1.05
SPG7-202ENST00000341316 NDUFAB1O14561 156 aa21.63■■□□□ 1.05
SPG7-202ENST00000341316 CLSTN1O94985 981 aa21.63■■□□□ 1.05
SPG7-202ENST00000341316 TUBB8Q3ZCM7 444 aa21.63■■□□□ 1.05
SPG7-202ENST00000341316 C11orf63Q6NUN7 778 aa21.63■■□□□ 1.05
SPG7-202ENST00000341316 GPD1LQ8N335 351 aa21.63■■□□□ 1.05
SPG7-202ENST00000341316 ZEB2O60315 1214 aa21.62■■□□□ 1.05
SPG7-202ENST00000341316 SUPT20HL2P0C7V6 817 aa21.62■■□□□ 1.05
SPG7-202ENST00000341316 GZMAP12544 262 aa21.62■■□□□ 1.05
SPG7-202ENST00000341316 WNT7BP56706 349 aa21.62■■□□□ 1.05
SPG7-202ENST00000341316 RTP1P59025 263 aa21.62■■□□□ 1.05
SPG7-202ENST00000341316 SUPT20HL1Q3ZLR7 823 aa21.62■■□□□ 1.05
SPG7-202ENST00000341316 BRDTQ58F21 947 aaPredicted RBP21.62■■□□□ 1.05
SPG7-202ENST00000341316 CYFIP1Q7L576 1253 aa21.62■■□□□ 1.05
SPG7-202ENST00000341316 ZNF516Q92618 1163 aa21.62■■□□□ 1.05
SPG7-202ENST00000341316 CDHR1Q96JP9 859 aa21.62■■□□□ 1.05
SPG7-202ENST00000341316 BTBD6Q96KE9 485 aa21.62■■□□□ 1.05
SPG7-202ENST00000341316 NT5C1BQ96P26 610 aa21.62■■□□□ 1.05
SPG7-202ENST00000341316 TRIM51Q9BSJ1 452 aa21.62■■□□□ 1.05
SPG7-202ENST00000341316 DIS3Q9Y2L1 958 aaKnown RBP21.62■■□□□ 1.05
SPG7-202ENST00000341316 LCTP09848 1927 aa21.62■■□□□ 1.05
SPG7-202ENST00000341316 DKC1O60832 514 aaKnown RBP eCLIP21.62■■□□□ 1.05
SPG7-202ENST00000341316 MESDQ14696 234 aa21.62■■□□□ 1.05
SPG7-202ENST00000341316 UAP1Q16222 522 aaPredicted RBP21.62■■□□□ 1.05
SPG7-202ENST00000341316 DDX1Q92499 740 aaKnown RBP21.62■■□□□ 1.05
SPG7-202ENST00000341316 SEC14L1Q92503 715 aa21.62■■□□□ 1.05
SPG7-202ENST00000341316 BICD1Q96G01 975 aa21.62■■□□□ 1.05
SPG7-202ENST00000341316 ERLIN2O94905 339 aa21.61■■□□□ 1.05
SPG7-202ENST00000341316 COMTP21964 271 aa21.61■■□□□ 1.05
SPG7-202ENST00000341316 GUCY1A3Q02108 690 aa21.61■■□□□ 1.05
SPG7-202ENST00000341316 LMBRD2Q68DH5 695 aaPredicted RBP21.61■■□□□ 1.05
SPG7-202ENST00000341316 MIS18BP1Q6P0N0 1132 aa21.61■■□□□ 1.05
SPG7-202ENST00000341316 CCDC26Q8TAB7 109 aa21.61■■□□□ 1.05
SPG7-202ENST00000341316 DGCR8Q8WYQ5 773 aaKnown RBP eCLIP21.61■■□□□ 1.05
SPG7-202ENST00000341316 TMEM143Q96AN5 459 aa21.61■■□□□ 1.05
SPG7-202ENST00000341316 GPRC5DQ9NZD1 345 aa21.61■■□□□ 1.05
SPG7-202ENST00000341316 GRIN3BO60391 1043 aa21.6■■□□□ 1.05
SPG7-202ENST00000341316 NR1D1P20393 614 aa21.6■■□□□ 1.05
SPG7-202ENST00000341316 GARTP22102 1010 aa21.6■■□□□ 1.05
SPG7-202ENST00000341316 HSD17B3P37058 310 aa21.6■■□□□ 1.05
SPG7-202ENST00000341316 PTENP60484 403 aa21.6■■□□□ 1.05
SPG7-202ENST00000341316 CDR2Q01850 454 aa21.6■■□□□ 1.05
SPG7-202ENST00000341316 GNPTABQ3T906 1256 aa21.6■■□□□ 1.05
SPG7-202ENST00000341316 XKR3Q5GH77 459 aa21.6■■□□□ 1.05
SPG7-202ENST00000341316 MAATS1Q7Z4T9 603 aa21.6■■□□□ 1.05
SPG7-202ENST00000341316 NLGN2Q8NFZ4 835 aa21.6■■□□□ 1.05
SPG7-202ENST00000341316 DPH5Q9H2P9 285 aa21.6■■□□□ 1.05
SPG7-202ENST00000341316 HOXC10Q9NYD6 342 aa21.6■■□□□ 1.05
SPG7-202ENST00000341316 PLAAQ9Y263 795 aa21.6■■□□□ 1.05
SPG7-202ENST00000341316 STAM2O75886 525 aa21.6■■□□□ 1.05
SPG7-202ENST00000341316 GTF2H1P32780 548 aa21.6■■□□□ 1.05
SPG7-202ENST00000341316 LSP1P33241 339 aa21.6■■□□□ 1.05
SPG7-202ENST00000341316 EMC2Q15006 297 aa21.6■■□□□ 1.05
SPG7-202ENST00000341316 TREML2Q5T2D2 321 aa21.6■■□□□ 1.05
SPG7-202ENST00000341316 IFT74Q96LB3 600 aa21.6■■□□□ 1.05
SPG7-202ENST00000341316 ATP6V1G3Q96LB4 118 aa21.6■■□□□ 1.05
SPG7-202ENST00000341316 HAPLN2Q9GZV7 340 aa21.6■■□□□ 1.05
SPG7-202ENST00000341316 MTA2O94776 668 aa21.59■■□□□ 1.05
SPG7-202ENST00000341316 PEX5P50542 639 aa21.59■■□□□ 1.05
SPG7-202ENST00000341316 NOL9Q5SY16 702 aaKnown RBP21.59■■□□□ 1.05
SPG7-202ENST00000341316 ZDHHC14Q8IZN3 488 aa21.59■■□□□ 1.05
SPG7-202ENST00000341316 DDX55Q8NHQ9 600 aaKnown RBP eCLIP21.59■■□□□ 1.05
SPG7-202ENST00000341316 ASAP3Q8TDY4 903 aa21.59■■□□□ 1.05
SPG7-202ENST00000341316 ATP8B4Q8TF62 1192 aa21.59■■□□□ 1.05
SPG7-202ENST00000341316 ZSWIM1Q9BR11 485 aa21.59■■□□□ 1.05
SPG7-202ENST00000341316 TRPC6Q9Y210 931 aa21.59■■□□□ 1.05
SPG7-202ENST00000341316 SYNGAP1Q96PV0 1343 aa21.59■■□□□ 1.05
SPG7-202ENST00000341316 CYP1A2P05177 515 aa21.59■■□□□ 1.05
SPG7-202ENST00000341316 PDE6CP51160 858 aa21.59■■□□□ 1.05
SPG7-202ENST00000341316 R3HDM1Q15032 1099 aaKnown RBP21.59■■□□□ 1.05
SPG7-202ENST00000341316 CEP85LQ5SZL2 805 aa21.59■■□□□ 1.05
SPG7-202ENST00000341316 ICE2Q659A1 982 aa21.59■■□□□ 1.05
SPG7-202ENST00000341316 C15orf39Q6ZRI6 1047 aa21.59■■□□□ 1.05
SPG7-202ENST00000341316 KAT2BQ92831 832 aa21.59■■□□□ 1.05
SPG7-202ENST00000341316 GLG1Q92896 1179 aa21.59■■□□□ 1.05
SPG7-202ENST00000341316 CD101Q93033 1021 aa21.59■■□□□ 1.05
SPG7-202ENST00000341316 SGIP1Q9BQI5 828 aa21.59■■□□□ 1.05
SPG7-202ENST00000341316 NUP85Q9BW27 656 aa21.59■■□□□ 1.05
SPG7-202ENST00000341316 TRIM31Q9BZY9 425 aa21.59■■□□□ 1.05
SPG7-202ENST00000341316 CD2APQ9Y5K6 639 aa21.59■■□□□ 1.05
SPG7-202ENST00000341316 MAFBQ9Y5Q3 323 aaPredicted RBP21.59■■□□□ 1.05
SPG7-202ENST00000341316 H0YGN5 161 aa21.58■■□□□ 1.05
SPG7-202ENST00000341316 USP2O75604 605 aaPredicted RBP21.58■■□□□ 1.05
SPG7-202ENST00000341316 POLGP54098 1239 aaPredicted RBP21.58■■□□□ 1.05
Retrieved 100 of 20,778 RNA–protein pairs in 36.6 ms