RNA–Protein interactions for RNA: ENST00000341060.3

TDP2-201, Transcript of tyrosyl-DNA phosphodiesterase 2, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene TDP2, Length 2,120 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TDP2-201ENST00000341060 FBXL13Q8NEE6 735 aa15.64■□□□□ 0.09
TDP2-201ENST00000341060 CCDC127Q96BQ5 260 aa15.64■□□□□ 0.09
TDP2-201ENST00000341060 UVRAGQ9P2Y5 699 aa15.64■□□□□ 0.09
TDP2-201ENST00000341060 CHORDC1Q9UHD1 332 aaPredicted RBP15.64■□□□□ 0.09
TDP2-201ENST00000341060 GGA2Q9UJY4 613 aa15.64■□□□□ 0.09
TDP2-201ENST00000341060 PNMA2Q9UL42 364 aa15.64■□□□□ 0.09
TDP2-201ENST00000341060 SNX24Q9Y343 169 aa15.64■□□□□ 0.09
TDP2-201ENST00000341060 PHIPQ8WWQ0 1821 aa15.64■□□□□ 0.09
TDP2-201ENST00000341060 DENND3A2RUS2 1198 aa15.64■□□□□ 0.09
TDP2-201ENST00000341060 DCDC2CA8MYV0 355 aa15.64■□□□□ 0.09
TDP2-201ENST00000341060 TRAPPC3O43617 180 aa15.64■□□□□ 0.09
TDP2-201ENST00000341060 LIG3P49916 1009 aa15.64■□□□□ 0.09
TDP2-201ENST00000341060 PMS2P54278 862 aa15.64■□□□□ 0.09
TDP2-201ENST00000341060 PLTPP55058 493 aa15.64■□□□□ 0.09
TDP2-201ENST00000341060 MAGOHP61326 146 aaKnown RBP15.64■□□□□ 0.09
TDP2-201ENST00000341060 CDR2Q01850 454 aa15.64■□□□□ 0.09
TDP2-201ENST00000341060 TTC27Q6P3X3 843 aa15.64■□□□□ 0.09
TDP2-201ENST00000341060 CCDC137Q6PK04 289 aaKnown RBP15.64■□□□□ 0.09
TDP2-201ENST00000341060 HOOK3Q86VS8 718 aa15.64■□□□□ 0.09
TDP2-201ENST00000341060 TMC2Q8TDI7 906 aa15.64■□□□□ 0.09
TDP2-201ENST00000341060 MAGOHBQ96A72 148 aaKnown RBP15.64■□□□□ 0.09
TDP2-201ENST00000341060 TLCD1Q96CP7 247 aa15.64■□□□□ 0.09
TDP2-201ENST00000341060 MFSD14AQ96MC6 490 aa15.64■□□□□ 0.09
TDP2-201ENST00000341060 NT5C1BQ96P26 610 aa15.64■□□□□ 0.09
TDP2-201ENST00000341060 NTPCRQ9BSD7 190 aaKnown RBP15.64■□□□□ 0.09
TDP2-201ENST00000341060 KIFC3Q9BVG8 833 aa15.64■□□□□ 0.09
TDP2-201ENST00000341060 C17orf75Q9HAS0 396 aa15.64■□□□□ 0.09
TDP2-201ENST00000341060 MYOZ2Q9NPC6 264 aa15.64■□□□□ 0.09
TDP2-201ENST00000341060 PPANQ9NQ55 473 aaKnown RBP15.64■□□□□ 0.09
TDP2-201ENST00000341060 UTP3Q9NQZ2 479 aaKnown RBP eCLIP15.64■□□□□ 0.094e-9■■■■■ 130.4
TDP2-201ENST00000341060 CNOT8Q9UFF9 292 aaKnown RBP15.64■□□□□ 0.09
TDP2-201ENST00000341060 PCDHA3Q9Y5H8 950 aa15.64■□□□□ 0.09
TDP2-201ENST00000341060 SIP14410 1827 aa15.63■□□□□ 0.09
TDP2-201ENST00000341060 BRCA1P38398 1863 aaKnown RBP15.63■□□□□ 0.09
TDP2-201ENST00000341060 KIAA0754O94854 1291 aa15.63■□□□□ 0.09
TDP2-201ENST00000341060 PYGMP11217 842 aa15.63■□□□□ 0.09
TDP2-201ENST00000341060 GTF2H1P32780 548 aa15.63■□□□□ 0.09
TDP2-201ENST00000341060 CXCL9Q07325 125 aa15.63■□□□□ 0.09
TDP2-201ENST00000341060 USP37Q86T82 979 aa15.63■□□□□ 0.09
TDP2-201ENST00000341060 SPIRE2Q8WWL2 714 aa15.63■□□□□ 0.09
TDP2-201ENST00000341060 DDX1Q92499 740 aaKnown RBP15.63■□□□□ 0.09
TDP2-201ENST00000341060 KIFAP3Q92845 792 aa15.63■□□□□ 0.09
TDP2-201ENST00000341060 ZNF653Q96CK0 615 aa15.63■□□□□ 0.09
TDP2-201ENST00000341060 TEPSINQ96N21 525 aa15.63■□□□□ 0.09
TDP2-201ENST00000341060 RUNDC3BQ96NL0 473 aa15.63■□□□□ 0.09
TDP2-201ENST00000341060 POP1Q99575 1024 aaKnown RBP15.63■□□□□ 0.09
TDP2-201ENST00000341060 MOV10L1Q9BXT6 1211 aaKnown RBP15.63■□□□□ 0.09
TDP2-201ENST00000341060 TAOK3Q9H2K8 898 aa15.63■□□□□ 0.09
TDP2-201ENST00000341060 LRRC4CQ9HCJ2 640 aa15.63■□□□□ 0.09
TDP2-201ENST00000341060 KMT5AQ9NQR1 393 aa15.63■□□□□ 0.09
TDP2-201ENST00000341060 GINM1Q9NU53 330 aa15.63■□□□□ 0.09
TDP2-201ENST00000341060 RAB20Q9NX57 234 aa15.63■□□□□ 0.09
TDP2-201ENST00000341060 PARP2Q9UGN5 583 aa15.63■□□□□ 0.09
TDP2-201ENST00000341060 GMNCA6NCL1 334 aa15.62■□□□□ 0.09
TDP2-201ENST00000341060 NFKBIEO00221 500 aa15.62■□□□□ 0.09
TDP2-201ENST00000341060 SPOPO43791 374 aa15.62■□□□□ 0.09
TDP2-201ENST00000341060 TMOD1P28289 359 aa15.62■□□□□ 0.09
TDP2-201ENST00000341060 RPL21P46778 160 aaKnown RBP15.62■□□□□ 0.09
TDP2-201ENST00000341060 ARHGEF16Q5VV41 709 aa15.62■□□□□ 0.09
TDP2-201ENST00000341060 SLC39A4Q6P5W5 647 aa15.62■□□□□ 0.09
TDP2-201ENST00000341060 SLC13A5Q86YT5 568 aaPredicted RBP15.62■□□□□ 0.09
TDP2-201ENST00000341060 TAS1R2Q8TE23 839 aa15.62■□□□□ 0.09
TDP2-201ENST00000341060 BSNDQ8WZ55 320 aa15.62■□□□□ 0.09
TDP2-201ENST00000341060 CYFIP2Q96F07 1278 aa15.62■□□□□ 0.09
TDP2-201ENST00000341060 SENP7Q9BQF6 1050 aa15.62■□□□□ 0.09
TDP2-201ENST00000341060 CNOT10Q9H9A5 744 aaKnown RBP15.62■□□□□ 0.09
TDP2-201ENST00000341060 SCAF8Q9UPN6 1271 aaKnown RBP15.62■□□□□ 0.09
TDP2-201ENST00000341060 PCDHA10Q9Y5I2 948 aa15.62■□□□□ 0.09
TDP2-201ENST00000341060 CTNND1O60716 968 aaKnown RBP15.62■□□□□ 0.09
TDP2-201ENST00000341060 ENPEPQ07075 957 aa15.62■□□□□ 0.09
TDP2-201ENST00000341060 CYP24A1Q07973 514 aa15.62■□□□□ 0.09
TDP2-201ENST00000341060 DENND2CQ68D51 928 aa15.62■□□□□ 0.09
TDP2-201ENST00000341060 XRRA1Q6P2D8 792 aa15.62■□□□□ 0.09
TDP2-201ENST00000341060 C12orf50Q8NA57 414 aaPredicted RBP15.62■□□□□ 0.09
TDP2-201ENST00000341060 BTBD6Q96KE9 485 aa15.62■□□□□ 0.09
TDP2-201ENST00000341060 TOPORSQ9NS56 1045 aaPredicted RBP15.62■□□□□ 0.09
TDP2-201ENST00000341060 MTUS1Q9ULD2 1270 aa15.62■□□□□ 0.09
TDP2-201ENST00000341060 CTDP1Q9Y5B0 961 aaPredicted RBP15.62■□□□□ 0.09
TDP2-201ENST00000341060 GRIN3BO60391 1043 aa15.61■□□□□ 0.09
TDP2-201ENST00000341060 ZBED4O75132 1171 aa15.61■□□□□ 0.09
TDP2-201ENST00000341060 SHBGP04278 402 aa15.61■□□□□ 0.09
TDP2-201ENST00000341060 FDX1P10109 184 aa15.61■□□□□ 0.09
TDP2-201ENST00000341060 FNTAP49354 379 aa15.61■□□□□ 0.09
TDP2-201ENST00000341060 GCNT1Q02742 428 aa15.61■□□□□ 0.09
TDP2-201ENST00000341060 MTMR2Q13614 643 aa15.61■□□□□ 0.09
TDP2-201ENST00000341060 TNFAIP1Q13829 316 aa15.61■□□□□ 0.09
TDP2-201ENST00000341060 SIX1Q15475 284 aaPredicted RBP15.61■□□□□ 0.09
TDP2-201ENST00000341060 NSMFQ6X4W1 530 aa15.61■□□□□ 0.09
TDP2-201ENST00000341060 OTUD6AQ7L8S5 288 aa15.61■□□□□ 0.09
TDP2-201ENST00000341060 POMGNT1Q8WZA1 660 aa15.61■□□□□ 0.09
TDP2-201ENST00000341060 GPRASP2Q96D09 838 aa15.61■□□□□ 0.09
TDP2-201ENST00000341060 PGM2Q96G03 612 aa15.61■□□□□ 0.09
TDP2-201ENST00000341060 FHDC1Q9C0D6 1143 aaPredicted RBP15.61■□□□□ 0.09
TDP2-201ENST00000341060 RPAP3Q9H6T3 665 aaPredicted RBP15.61■□□□□ 0.09
TDP2-201ENST00000341060 MTRF1LQ9UGC7 380 aaKnown RBP15.61■□□□□ 0.09
TDP2-201ENST00000341060 TCRBV7S2A1N4TA0A589 114 aa15.61■□□□□ 0.09
TDP2-201ENST00000341060 VWA5AO00534 786 aa15.61■□□□□ 0.09
TDP2-201ENST00000341060 MAFGO15525 162 aa15.61■□□□□ 0.09
TDP2-201ENST00000341060 CAND2O75155 1236 aa15.61■□□□□ 0.09
TDP2-201ENST00000341060 LCTP09848 1927 aa15.61■□□□□ 0.09
Retrieved 100 of 20,778 RNA–protein pairs in 27.7 ms