RNA–Protein interactions for RNA: ENST00000340413.6

NUP43-201, Transcript of nucleoporin 43, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene NUP43, Length 3,874 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NUP43-201ENST00000340413 WBP1LQ9NX94 342 aa7.78□□□□□ -1.16
NUP43-201ENST00000340413 PTPN22Q9Y2R2 807 aa7.78□□□□□ -1.16
NUP43-201ENST00000340413 TSPAN1O60635 241 aa7.77□□□□□ -1.17
NUP43-201ENST00000340413 C4BPAP04003 597 aaKnown RBP7.77□□□□□ -1.17
NUP43-201ENST00000340413 CCDC175P0C221 793 aa7.77□□□□□ -1.17
NUP43-201ENST00000340413 CASP14P31944 242 aa7.77□□□□□ -1.17
NUP43-201ENST00000340413 KRT9P35527 623 aa7.77□□□□□ -1.17
NUP43-201ENST00000340413 VPS36Q86VN1 386 aa7.77□□□□□ -1.17
NUP43-201ENST00000340413 CBWD1Q9BRT8 395 aa7.77□□□□□ -1.17
NUP43-201ENST00000340413 LSM14BQ9BX40 385 aaKnown RBP7.77□□□□□ -1.17
NUP43-201ENST00000340413 ARHGAP39Q9C0H5 1083 aa7.77□□□□□ -1.17
NUP43-201ENST00000340413 PDZD7Q9H5P4 517 aa7.77□□□□□ -1.17
NUP43-201ENST00000340413 ITGA11Q9UKX5 1188 aa7.77□□□□□ -1.17
NUP43-201ENST00000340413 OGDHLQ9ULD0 1010 aa7.77□□□□□ -1.17
NUP43-201ENST00000340413 ZFP91-CNTFA0A0A6YYC7 529 aaPredicted RBP7.77□□□□□ -1.17
NUP43-201ENST00000340413 A0A0A6YYK5 440 aaPredicted RBP7.77□□□□□ -1.17
NUP43-201ENST00000340413 TMEM150BA6NC51 233 aa7.77□□□□□ -1.17
NUP43-201ENST00000340413 LRRIQ3A6PVS8 624 aaPredicted RBP7.77□□□□□ -1.17
NUP43-201ENST00000340413 ZNF286BP0CG31 522 aa7.77□□□□□ -1.17
NUP43-201ENST00000340413 KCNE1P15382 129 aa7.77□□□□□ -1.17
NUP43-201ENST00000340413 GRK4P32298 578 aa7.77□□□□□ -1.17
NUP43-201ENST00000340413 KCNA1Q09470 495 aa7.77□□□□□ -1.17
NUP43-201ENST00000340413 ASTE1Q2TB18 679 aaPredicted RBP7.77□□□□□ -1.17
NUP43-201ENST00000340413 TRIM72Q6ZMU5 477 aa7.77□□□□□ -1.17
NUP43-201ENST00000340413 CCAR2Q8N163 923 aaKnown RBP7.77□□□□□ -1.17
NUP43-201ENST00000340413 CELF4Q9BZC1 486 aaKnown RBP7.77□□□□□ -1.17
NUP43-201ENST00000340413 CRISPLD2Q9H0B8 497 aa7.77□□□□□ -1.17
NUP43-201ENST00000340413 CYP3A43Q9HB55 503 aa7.77□□□□□ -1.17
NUP43-201ENST00000340413 GCNT4Q9P109 453 aa7.77□□□□□ -1.17
NUP43-201ENST00000340413 TBC1D8O95759 1140 aa7.77□□□□□ -1.17
NUP43-201ENST00000340413 UCHL3P15374 230 aa7.77□□□□□ -1.17
NUP43-201ENST00000340413 CASP4P49662 377 aa7.77□□□□□ -1.17
NUP43-201ENST00000340413 FXR1P51114 621 aaKnown RBP eCLIP7.77□□□□□ -1.17
NUP43-201ENST00000340413 CYP2J2P51589 502 aa7.77□□□□□ -1.17
NUP43-201ENST00000340413 SP4Q02446 784 aa7.77□□□□□ -1.17
NUP43-201ENST00000340413 BMS1Q14692 1282 aaKnown RBP7.77□□□□□ -1.17
NUP43-201ENST00000340413 TRIM71Q2Q1W2 868 aaKnown RBP7.77□□□□□ -1.17
NUP43-201ENST00000340413 MRPL10Q7Z7H8 261 aaKnown RBP7.77□□□□□ -1.17
NUP43-201ENST00000340413 TRIM50Q86XT4 487 aa7.77□□□□□ -1.17
NUP43-201ENST00000340413 RHPN2Q8IUC4 686 aa7.77□□□□□ -1.17
NUP43-201ENST00000340413 UBR7Q8N806 425 aa7.77□□□□□ -1.17
NUP43-201ENST00000340413 UIMC1Q96RL1 719 aa7.77□□□□□ -1.17
NUP43-201ENST00000340413 TMEM117Q9H0C3 514 aa7.77□□□□□ -1.17
NUP43-201ENST00000340413 HAUS4Q9H6D7 363 aa7.77□□□□□ -1.17
NUP43-201ENST00000340413 RBAKQ9NYW8 714 aaPredicted RBP7.77□□□□□ -1.17
NUP43-201ENST00000340413 CLIC2O15247 247 aa7.76□□□□□ -1.17
NUP43-201ENST00000340413 RFC2P35250 354 aa7.76□□□□□ -1.17
NUP43-201ENST00000340413 HADHBP55084 474 aaKnown RBP7.76□□□□□ -1.17
NUP43-201ENST00000340413 ASIC2Q16515 512 aa7.76□□□□□ -1.17
NUP43-201ENST00000340413 NYAP1Q6ZVC0 841 aa7.76□□□□□ -1.17
NUP43-201ENST00000340413 CACNA2D4Q7Z3S7 1137 aa7.76□□□□□ -1.17
NUP43-201ENST00000340413 RNF10Q8N5U6 811 aaKnown RBP7.76□□□□□ -1.17
NUP43-201ENST00000340413 SPC24Q8NBT2 197 aa7.76□□□□□ -1.17
NUP43-201ENST00000340413 ARMC5Q96C12 935 aa7.76□□□□□ -1.17
NUP43-201ENST00000340413 NT5C1BQ96P26 610 aa7.76□□□□□ -1.17
NUP43-201ENST00000340413 SENP6Q9GZR1 1112 aaPredicted RBP7.76□□□□□ -1.17
NUP43-201ENST00000340413 CDT1Q9H211 546 aa7.76□□□□□ -1.17
NUP43-201ENST00000340413 TMEM51Q9NW97 253 aa7.76□□□□□ -1.17
NUP43-201ENST00000340413 CNTN3Q9P232 1028 aa7.76□□□□□ -1.17
NUP43-201ENST00000340413 AKT3Q9Y243 479 aa7.76□□□□□ -1.17
NUP43-201ENST00000340413 GPR182O15218 404 aa7.76□□□□□ -1.17
NUP43-201ENST00000340413 ZNF623O75123 536 aa7.76□□□□□ -1.17
NUP43-201ENST00000340413 EIF4BP23588 611 aaKnown RBP7.76□□□□□ -1.17
NUP43-201ENST00000340413 SOX5P35711 763 aa7.76□□□□□ -1.17
NUP43-201ENST00000340413 SNX17Q15036 470 aa7.76□□□□□ -1.17
NUP43-201ENST00000340413 LHX8Q68G74 356 aa7.76□□□□□ -1.17
NUP43-201ENST00000340413 PDZRN4Q6ZMN7 1036 aaPredicted RBP7.76□□□□□ -1.17
NUP43-201ENST00000340413 LRRC52Q8N7C0 313 aa7.76□□□□□ -1.17
NUP43-201ENST00000340413 ZNF296Q8WUU4 475 aaPredicted RBP7.76□□□□□ -1.17
NUP43-201ENST00000340413 SHC3Q92529 594 aa7.76□□□□□ -1.17
NUP43-201ENST00000340413 APBB2Q92870 758 aa7.76□□□□□ -1.17
NUP43-201ENST00000340413 FNBP1Q96RU3 617 aa7.76□□□□□ -1.17
NUP43-201ENST00000340413 SYT11Q9BT88 431 aa7.76□□□□□ -1.17
NUP43-201ENST00000340413 CCDC94Q9BW85 323 aaPredicted RBP7.76□□□□□ -1.17
NUP43-201ENST00000340413 XRN2Q9H0D6 950 aaKnown RBP eCLIP7.76□□□□□ -1.17
NUP43-201ENST00000340413 RPF1Q9H9Y2 349 aaKnown RBP7.76□□□□□ -1.17
NUP43-201ENST00000340413 RAB20Q9NX57 234 aa7.76□□□□□ -1.17
NUP43-201ENST00000340413 DOCK3Q8IZD9 2030 aa7.76□□□□□ -1.17
NUP43-201ENST00000340413 ERLIN2O94905 339 aa7.76□□□□□ -1.17
NUP43-201ENST00000340413 TNNC2P02585 160 aa7.76□□□□□ -1.17
NUP43-201ENST00000340413 INHAP05111 366 aa7.76□□□□□ -1.17
NUP43-201ENST00000340413 P4HA1P13674 534 aa7.76□□□□□ -1.17
NUP43-201ENST00000340413 MARK3P27448 753 aa7.76□□□□□ -1.17
NUP43-201ENST00000340413 PNPLA4P41247 253 aa7.76□□□□□ -1.17
NUP43-201ENST00000340413 CDK7P50613 346 aa7.76□□□□□ -1.17
NUP43-201ENST00000340413 DUOXA2Q1HG44 320 aa7.76□□□□□ -1.17
NUP43-201ENST00000340413 SGSM1Q2NKQ1 1148 aa7.76□□□□□ -1.17
NUP43-201ENST00000340413 ALKAL1Q6UXT8 129 aa7.76□□□□□ -1.17
NUP43-201ENST00000340413 ANKRD36BP1Q96IX9 119 aa7.76□□□□□ -1.17
NUP43-201ENST00000340413 TOX2Q96NM4 488 aa7.76□□□□□ -1.17
NUP43-201ENST00000340413 TOPORSQ9NS56 1045 aaPredicted RBP7.76□□□□□ -1.17
NUP43-201ENST00000340413 C1orf112Q9NSG2 853 aa7.76□□□□□ -1.17
NUP43-201ENST00000340413 KIAA1257Q9ULG3 409 aa7.76□□□□□ -1.17
NUP43-201ENST00000340413 PAXBP1Q9Y5B6 917 aa7.76□□□□□ -1.17
NUP43-201ENST00000340413 IPO7O95373 1038 aaKnown RBP7.75□□□□□ -1.17
NUP43-201ENST00000340413 CLCN3P51790 818 aa7.75□□□□□ -1.17
NUP43-201ENST00000340413 ACLYP53396 1101 aa7.75□□□□□ -1.17
NUP43-201ENST00000340413 TRIM11Q96F44 468 aa7.75□□□□□ -1.17
NUP43-201ENST00000340413 TARS2Q9BW92 718 aaKnown RBP7.75□□□□□ -1.17
NUP43-201ENST00000340413 FTHL17Q9BXU8 183 aa7.75□□□□□ -1.17
Retrieved 100 of 20,778 RNA–protein pairs in 17.7 ms