RNA–Protein interactions for RNA: ENST00000339701.7

CSMD3-202, Transcript of CUB and Sushi multiple domains 3, humanhuman

TSL 1 (best)

Gene CSMD3, Length 10,773 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSMD3-202ENST00000339701 TBC1D8BQ0IIM8 1120 aa3.48□□□□□ -1.85
CSMD3-202ENST00000339701 DMP1Q13316 513 aaPredicted RBP3.48□□□□□ -1.85
CSMD3-202ENST00000339701 TEAD4Q15561 434 aa3.48□□□□□ -1.85
CSMD3-202ENST00000339701 RSBN1LQ6PCB5 846 aaPredicted RBP3.48□□□□□ -1.85
CSMD3-202ENST00000339701 C15orf40Q8WUR7 153 aa3.48□□□□□ -1.85
CSMD3-202ENST00000339701 DDX1Q92499 740 aaKnown RBP3.48□□□□□ -1.85
CSMD3-202ENST00000339701 MAGEB10Q96LZ2 347 aaPredicted RBP3.48□□□□□ -1.85
CSMD3-202ENST00000339701 TMEM60Q9H2L4 133 aa3.48□□□□□ -1.85
CSMD3-202ENST00000339701 BICC1Q9H694 974 aaKnown RBP3.48□□□□□ -1.85
CSMD3-202ENST00000339701 SUGCTQ9HAC7 445 aa3.48□□□□□ -1.85
CSMD3-202ENST00000339701 KRCC1Q9NPI7 259 aaPredicted RBP3.48□□□□□ -1.85
CSMD3-202ENST00000339701 PKD2L2Q9NZM6 624 aa3.48□□□□□ -1.85
CSMD3-202ENST00000339701 SLC13A4Q9UKG4 626 aa3.48□□□□□ -1.85
CSMD3-202ENST00000339701 EFR3BQ9Y2G0 817 aa3.48□□□□□ -1.85
CSMD3-202ENST00000339701 SLIT2O94813 1529 aa3.48□□□□□ -1.85
CSMD3-202ENST00000339701 DLEC1Q9Y238 1755 aa3.48□□□□□ -1.85
CSMD3-202ENST00000339701 FAM25AB3EWG3 89 aa3.48□□□□□ -1.85
CSMD3-202ENST00000339701 FAM25CB3EWG5 89 aa3.48□□□□□ -1.85
CSMD3-202ENST00000339701 FAM25GB3EWG6 89 aa3.48□□□□□ -1.85
CSMD3-202ENST00000339701 H2AFYO75367 372 aaKnown RBP3.48□□□□□ -1.85
CSMD3-202ENST00000339701 SASH1O94885 1247 aa3.48□□□□□ -1.85
CSMD3-202ENST00000339701 MAGEA9P43362 315 aa3.48□□□□□ -1.85
CSMD3-202ENST00000339701 C21orf59P57076 290 aa3.48□□□□□ -1.85
CSMD3-202ENST00000339701 RUNX1T1Q06455 604 aa3.48□□□□□ -1.85
CSMD3-202ENST00000339701 RAD51Q06609 339 aa3.48□□□□□ -1.85
CSMD3-202ENST00000339701 DNAL1Q4LDG9 190 aa3.48□□□□□ -1.85
CSMD3-202ENST00000339701 MYSM1Q5VVJ2 828 aa3.48□□□□□ -1.85
CSMD3-202ENST00000339701 SNX30Q5VWJ9 437 aa3.48□□□□□ -1.85
CSMD3-202ENST00000339701 CAMK1DQ8IU85 385 aa3.48□□□□□ -1.85
CSMD3-202ENST00000339701 PDIK1LQ8N165 341 aa3.48□□□□□ -1.85
CSMD3-202ENST00000339701 TTC30BQ8N4P2 665 aa3.48□□□□□ -1.85
CSMD3-202ENST00000339701 SLC7A3Q8WY07 619 aa3.48□□□□□ -1.85
CSMD3-202ENST00000339701 KRT35Q92764 455 aa3.48□□□□□ -1.85
CSMD3-202ENST00000339701 ATOH1Q92858 354 aaPredicted RBP3.48□□□□□ -1.85
CSMD3-202ENST00000339701 FAR2Q96K12 515 aa3.48□□□□□ -1.85
CSMD3-202ENST00000339701 SH3GL1Q99961 368 aa3.48□□□□□ -1.85
CSMD3-202ENST00000339701 GOLPH3LQ9H4A5 285 aa3.48□□□□□ -1.85
CSMD3-202ENST00000339701 HERC5Q9UII4 1024 aaKnown RBP3.48□□□□□ -1.85
CSMD3-202ENST00000339701 SORCS3Q9UPU3 1222 aa3.48□□□□□ -1.85
CSMD3-202ENST00000339701 LZTS1Q9Y250 596 aa3.48□□□□□ -1.85
CSMD3-202ENST00000339701 TARSL2A2RTX5 802 aaKnown RBP3.48□□□□□ -1.85
CSMD3-202ENST00000339701 IFRD2Q12894 506 aaPredicted RBP3.48□□□□□ -1.85
CSMD3-202ENST00000339701 ITGB3BPQ13352 177 aaPredicted RBP3.48□□□□□ -1.85
CSMD3-202ENST00000339701 INAQ16352 499 aa3.48□□□□□ -1.85
CSMD3-202ENST00000339701 ARMC6Q6NXE6 501 aa3.48□□□□□ -1.85
CSMD3-202ENST00000339701 GIMAP6Q6P9H5 292 aa3.48□□□□□ -1.85
CSMD3-202ENST00000339701 ENKURQ8TC29 256 aa3.48□□□□□ -1.85
CSMD3-202ENST00000339701 KLRG1Q96E93 195 aa3.48□□□□□ -1.85
CSMD3-202ENST00000339701 TCF25Q9BQ70 676 aa3.48□□□□□ -1.85
CSMD3-202ENST00000339701 ZNF180Q9UJW8 692 aa3.48□□□□□ -1.85
CSMD3-202ENST00000339701 TBKBP1A7MCY6 615 aa3.48□□□□□ -1.85
CSMD3-202ENST00000339701 KATNA1O75449 491 aa3.48□□□□□ -1.85
CSMD3-202ENST00000339701 GPC4O75487 556 aa3.48□□□□□ -1.85
CSMD3-202ENST00000339701 ECDO95905 644 aaPredicted RBP3.48□□□□□ -1.85
CSMD3-202ENST00000339701 ALADP13716 330 aa3.48□□□□□ -1.85
CSMD3-202ENST00000339701 GRK4P32298 578 aa3.48□□□□□ -1.85
CSMD3-202ENST00000339701 BCAP31P51572 246 aa3.48□□□□□ -1.85
CSMD3-202ENST00000339701 RPS6KA3P51812 740 aa3.48□□□□□ -1.85
CSMD3-202ENST00000339701 CASP6P55212 293 aa3.48□□□□□ -1.85
CSMD3-202ENST00000339701 ZSCAN26Q16670 478 aa3.48□□□□□ -1.85
CSMD3-202ENST00000339701 DGKDQ16760 1214 aa3.48□□□□□ -1.85
CSMD3-202ENST00000339701 MEI1Q5TIA1 1274 aa3.48□□□□□ -1.85
CSMD3-202ENST00000339701 TMEM164Q5U3C3 297 aa3.48□□□□□ -1.85
CSMD3-202ENST00000339701 DSTYKQ6XUX3 929 aa3.48□□□□□ -1.85
CSMD3-202ENST00000339701 DDX53Q86TM3 631 aaKnown RBP3.48□□□□□ -1.85
CSMD3-202ENST00000339701 RIT1Q92963 219 aa3.48□□□□□ -1.85
CSMD3-202ENST00000339701 DHX58Q96C10 678 aa3.48□□□□□ -1.85
CSMD3-202ENST00000339701 AHCYL2Q96HN2 611 aaKnown RBP3.48□□□□□ -1.85
CSMD3-202ENST00000339701 FANCEQ9HB96 536 aa3.48□□□□□ -1.85
CSMD3-202ENST00000339701 RYDENQ9NUL5 291 aaKnown RBP3.48□□□□□ -1.85
CSMD3-202ENST00000339701 UBP1Q9NZI7 540 aa3.48□□□□□ -1.85
CSMD3-202ENST00000339701 RSPH14Q9UHP6 348 aa3.48□□□□□ -1.85
CSMD3-202ENST00000339701 CDHR2Q9BYE9 1310 aa3.48□□□□□ -1.85
CSMD3-202ENST00000339701 CCDC189A1A4V9 331 aa3.48□□□□□ -1.85
CSMD3-202ENST00000339701 GSAPA4D1B5 854 aa3.48□□□□□ -1.85
CSMD3-202ENST00000339701 GLTPD2A6NH11 291 aa3.48□□□□□ -1.85
CSMD3-202ENST00000339701 TRAF5O00463 557 aa3.48□□□□□ -1.85
CSMD3-202ENST00000339701 ASAP2O43150 1006 aa3.48□□□□□ -1.85
CSMD3-202ENST00000339701 MED7O43513 233 aa3.48□□□□□ -1.85
CSMD3-202ENST00000339701 FCGR1AP12314 374 aa3.48□□□□□ -1.85
CSMD3-202ENST00000339701 S100A5P33763 92 aa3.48□□□□□ -1.85
CSMD3-202ENST00000339701 NNTQ13423 1086 aa3.48□□□□□ -1.85
CSMD3-202ENST00000339701 STILQ15468 1287 aa3.48□□□□□ -1.85
CSMD3-202ENST00000339701 RTN1Q16799 776 aa3.48□□□□□ -1.85
CSMD3-202ENST00000339701 KRT71Q3SY84 523 aa3.48□□□□□ -1.85
CSMD3-202ENST00000339701 SLC9C2Q5TAH2 1124 aa3.48□□□□□ -1.85
CSMD3-202ENST00000339701 ARMCX2Q7L311 632 aa3.48□□□□□ -1.85
CSMD3-202ENST00000339701 PARP9Q8IXQ6 854 aa3.48□□□□□ -1.85
CSMD3-202ENST00000339701 ANKRD44Q8N8A2 993 aa3.48□□□□□ -1.85
CSMD3-202ENST00000339701 STARD8Q92502 1023 aa3.48□□□□□ -1.85
CSMD3-202ENST00000339701 DNAJC7Q99615 494 aa3.48□□□□□ -1.85
CSMD3-202ENST00000339701 ZSWIM4Q9H7M6 989 aa3.48□□□□□ -1.85
CSMD3-202ENST00000339701 CHPF2Q9P2E5 772 aa3.48□□□□□ -1.85
CSMD3-202ENST00000339701 ARPP21Q9UBL0 812 aaPredicted RBP3.48□□□□□ -1.85
CSMD3-202ENST00000339701 SNX5Q9Y5X3 404 aa3.48□□□□□ -1.85
CSMD3-202ENST00000339701 FPGT-TNNI3KV9GXZ4 949 aa3.48□□□□□ -1.85
CSMD3-202ENST00000339701 ABCB11O95342 1321 aa3.48□□□□□ -1.85
CSMD3-202ENST00000339701 ADCY6O43306 1168 aa3.47□□□□□ -1.85
CSMD3-202ENST00000339701 BMP10O95393 424 aa3.47□□□□□ -1.85
CSMD3-202ENST00000339701 KLRC2P26717 231 aa3.47□□□□□ -1.85
Retrieved 100 of 20,778 RNA–protein pairs in 79.7 ms