RNA–Protein interactions for RNA: ENST00000339255.2

NIPAL3-202, Transcript of NIPA like domain containing 3, humanhuman

TSL 5 BASIC

Gene NIPAL3, Length 1,676 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NIPAL3-202ENST00000339255 IL18RAPO95256 599 aa15.79■□□□□ 0.12
NIPAL3-202ENST00000339255 AFPP02771 609 aaKnown RBP15.79■□□□□ 0.12
NIPAL3-202ENST00000339255 GTF2H1P32780 548 aa15.79■□□□□ 0.12
NIPAL3-202ENST00000339255 ACOT2P49753 483 aa15.79■□□□□ 0.12
NIPAL3-202ENST00000339255 UBXN1Q04323 297 aa15.79■□□□□ 0.12
NIPAL3-202ENST00000339255 FAAP100Q0VG06 881 aa15.79■□□□□ 0.12
NIPAL3-202ENST00000339255 PSMD6Q15008 389 aa15.79■□□□□ 0.12
NIPAL3-202ENST00000339255 SURF1Q15526 300 aa15.79■□□□□ 0.12
NIPAL3-202ENST00000339255 TWF2Q6IBS0 349 aaKnown RBP15.79■□□□□ 0.12
NIPAL3-202ENST00000339255 TRAF7Q6Q0C0 670 aa15.79■□□□□ 0.12
NIPAL3-202ENST00000339255 CRELD2Q6UXH1 353 aaPredicted RBP15.79■□□□□ 0.12
NIPAL3-202ENST00000339255 BRSK2Q8IWQ3 736 aa15.79■□□□□ 0.12
NIPAL3-202ENST00000339255 PARD3BQ8TEW8 1205 aa15.79■□□□□ 0.12
NIPAL3-202ENST00000339255 TRAIPQ9BWF2 469 aa15.79■□□□□ 0.12
NIPAL3-202ENST00000339255 PADI3Q9ULW8 664 aa15.79■□□□□ 0.12
NIPAL3-202ENST00000339255 GRM5P41594 1212 aa15.79■□□□□ 0.12
NIPAL3-202ENST00000339255 RAB27AP51159 221 aa15.79■□□□□ 0.12
NIPAL3-202ENST00000339255 CLDN10P78369 228 aa15.79■□□□□ 0.12
NIPAL3-202ENST00000339255 CCDC173Q0VFZ6 552 aa15.79■□□□□ 0.12
NIPAL3-202ENST00000339255 KCNH2Q12809 1159 aa15.79■□□□□ 0.12
NIPAL3-202ENST00000339255 NFX1Q12986 1120 aaKnown RBP15.79■□□□□ 0.12
NIPAL3-202ENST00000339255 UBE2Q1Q7Z7E8 422 aa15.79■□□□□ 0.12
NIPAL3-202ENST00000339255 THNSL1Q8IYQ7 743 aa15.79■□□□□ 0.12
NIPAL3-202ENST00000339255 ZSWIM2Q8NEG5 633 aa15.79■□□□□ 0.12
NIPAL3-202ENST00000339255 FNBP1Q96RU3 617 aa15.79■□□□□ 0.12
NIPAL3-202ENST00000339255 CCDC94Q9BW85 323 aaPredicted RBP15.79■□□□□ 0.12
NIPAL3-202ENST00000339255 AGO3Q9H9G7 860 aaKnown RBP15.79■□□□□ 0.12
NIPAL3-202ENST00000339255 INTS13Q9NVM9 706 aa15.79■□□□□ 0.12
NIPAL3-202ENST00000339255 TBX21Q9UL17 535 aa15.79■□□□□ 0.12
NIPAL3-202ENST00000339255 ATP11BQ9Y2G3 1177 aa15.79■□□□□ 0.12
NIPAL3-202ENST00000339255 GTPBP10A4D1E9 387 aaKnown RBP15.78■□□□□ 0.12
NIPAL3-202ENST00000339255 PMM2O15305 246 aa15.78■□□□□ 0.12
NIPAL3-202ENST00000339255 NPTXRO95502 500 aa15.78■□□□□ 0.12
NIPAL3-202ENST00000339255 CLTBP09497 229 aa15.78■□□□□ 0.12
NIPAL3-202ENST00000339255 STAG3L1P0CL83 205 aa15.78■□□□□ 0.12
NIPAL3-202ENST00000339255 ZSCAN20P17040 1043 aaPredicted RBP15.78■□□□□ 0.12
NIPAL3-202ENST00000339255 CD52P31358 61 aa15.78■□□□□ 0.12
NIPAL3-202ENST00000339255 CETN1Q12798 172 aa15.78■□□□□ 0.12
NIPAL3-202ENST00000339255 CDR2LQ86X02 465 aaPredicted RBP15.78■□□□□ 0.12
NIPAL3-202ENST00000339255 HACE1Q8IYU2 909 aa15.78■□□□□ 0.12
NIPAL3-202ENST00000339255 PDLIM2Q96JY6 352 aa15.78■□□□□ 0.12
NIPAL3-202ENST00000339255 ERGIC2Q96RQ1 377 aa15.78■□□□□ 0.12
NIPAL3-202ENST00000339255 FTHL17Q9BXU8 183 aa15.78■□□□□ 0.12
NIPAL3-202ENST00000339255 IFIH1Q9BYX4 1025 aaKnown RBP15.78■□□□□ 0.12
NIPAL3-202ENST00000339255 RPF1Q9H9Y2 349 aaKnown RBP15.78■□□□□ 0.12
NIPAL3-202ENST00000339255 SCN5AQ14524 2016 aa15.77■□□□□ 0.12
NIPAL3-202ENST00000339255 GOLGA6L6A8MZA4 724 aa15.77■□□□□ 0.12
NIPAL3-202ENST00000339255 P4HA2O15460 535 aa15.77■□□□□ 0.12
NIPAL3-202ENST00000339255 AP3M2P53677 418 aa15.77■□□□□ 0.12
NIPAL3-202ENST00000339255 ENOX2Q16206 610 aaKnown RBP15.77■□□□□ 0.12
NIPAL3-202ENST00000339255 LRRC26Q2I0M4 334 aa15.77■□□□□ 0.12
NIPAL3-202ENST00000339255 ZBTB41Q5SVQ8 909 aa15.77■□□□□ 0.12
NIPAL3-202ENST00000339255 SPECC1LQ69YQ0 1117 aa15.77■□□□□ 0.12
NIPAL3-202ENST00000339255 VSTM4Q8IW00 320 aa15.77■□□□□ 0.12
NIPAL3-202ENST00000339255 CD302Q8IX05 232 aa15.77■□□□□ 0.12
NIPAL3-202ENST00000339255 CCDC127Q96BQ5 260 aa15.77■□□□□ 0.12
NIPAL3-202ENST00000339255 ACAP3Q96P50 834 aa15.77■□□□□ 0.12
NIPAL3-202ENST00000339255 PLEKHA5Q9HAU0 1116 aa15.77■□□□□ 0.12
NIPAL3-202ENST00000339255 TOPORSQ9NS56 1045 aaPredicted RBP15.77■□□□□ 0.12
NIPAL3-202ENST00000339255 ITIH6Q6UXX5 1313 aa15.77■□□□□ 0.12
NIPAL3-202ENST00000339255 SKIP12755 728 aa15.76■□□□□ 0.11
NIPAL3-202ENST00000339255 PBX1P40424 430 aa15.76■□□□□ 0.11
NIPAL3-202ENST00000339255 TNFSF9P41273 254 aa15.76■□□□□ 0.11
NIPAL3-202ENST00000339255 FMO5P49326 533 aa15.76■□□□□ 0.11
NIPAL3-202ENST00000339255 YARSP54577 528 aaKnown RBP15.76■□□□□ 0.11
NIPAL3-202ENST00000339255 MBTPS1Q14703 1052 aa15.76■□□□□ 0.11
NIPAL3-202ENST00000339255 WDR49Q8IV35 697 aa15.76■□□□□ 0.11
NIPAL3-202ENST00000339255 DRC7Q8IY82 874 aa15.76■□□□□ 0.11
NIPAL3-202ENST00000339255 IQCDQ96DY2 449 aa15.76■□□□□ 0.11
NIPAL3-202ENST00000339255 TSPAN18Q96SJ8 248 aa15.76■□□□□ 0.11
NIPAL3-202ENST00000339255 ASB7Q9H672 318 aa15.76■□□□□ 0.11
NIPAL3-202ENST00000339255 TMEM39AQ9NV64 488 aa15.76■□□□□ 0.11
NIPAL3-202ENST00000339255 ALPK3Q96L96 1907 aa15.76■□□□□ 0.11
NIPAL3-202ENST00000339255 LRRIQ3A6PVS8 624 aaPredicted RBP15.76■□□□□ 0.11
NIPAL3-202ENST00000339255 TEX33O43247 280 aa15.76■□□□□ 0.11
NIPAL3-202ENST00000339255 TRIM49P0CI25 452 aa15.76■□□□□ 0.11
NIPAL3-202ENST00000339255 TRIM49CP0CI26 452 aa15.76■□□□□ 0.11
NIPAL3-202ENST00000339255 DLATP10515 647 aaKnown RBP15.76■□□□□ 0.11
NIPAL3-202ENST00000339255 EN2P19622 333 aaPredicted RBP15.76■□□□□ 0.11
NIPAL3-202ENST00000339255 RFC2P35250 354 aa15.76■□□□□ 0.11
NIPAL3-202ENST00000339255 MYL7Q01449 175 aa15.76■□□□□ 0.11
NIPAL3-202ENST00000339255 UBXN11Q5T124 520 aa15.76■□□□□ 0.11
NIPAL3-202ENST00000339255 NT5DC4Q86YG4 428 aa15.76■□□□□ 0.11
NIPAL3-202ENST00000339255 CEP120Q8N960 986 aa15.76■□□□□ 0.11
NIPAL3-202ENST00000339255 TET1Q8NFU7 2136 aa15.76■□□□□ 0.11
NIPAL3-202ENST00000339255 APBB2Q92870 758 aa15.76■□□□□ 0.11
NIPAL3-202ENST00000339255 CGRRF1Q99675 332 aa15.76■□□□□ 0.11
NIPAL3-202ENST00000339255 EIF2AQ9BY44 585 aaKnown RBP15.76■□□□□ 0.11
NIPAL3-202ENST00000339255 PDE11AQ9HCR9 933 aa15.76■□□□□ 0.11
NIPAL3-202ENST00000339255 FAM105AQ9NUU6 356 aa15.76■□□□□ 0.11
NIPAL3-202ENST00000339255 IMPACTQ9P2X3 320 aa15.76■□□□□ 0.11
NIPAL3-202ENST00000339255 PCDHB2Q9Y5E7 798 aa15.76■□□□□ 0.11
NIPAL3-202ENST00000339255 ZNF623O75123 536 aa15.75■□□□□ 0.11
NIPAL3-202ENST00000339255 CXCL8P10145 99 aa15.75■□□□□ 0.11
NIPAL3-202ENST00000339255 TNNI1P19237 187 aa15.75■□□□□ 0.11
NIPAL3-202ENST00000339255 MXI1P50539 228 aa15.75■□□□□ 0.11
NIPAL3-202ENST00000339255 OSTNP61366 133 aa15.75■□□□□ 0.11
NIPAL3-202ENST00000339255 DLG4P78352 724 aa15.75■□□□□ 0.11
NIPAL3-202ENST00000339255 TRIM14Q14142 442 aa15.75■□□□□ 0.11
NIPAL3-202ENST00000339255 DSC3Q14574 896 aa15.75■□□□□ 0.11
Retrieved 100 of 20,778 RNA–protein pairs in 26.5 ms