RNA–Protein interactions for RNA: ENST00000338962.8

LRP1-202, Transcript of LDL receptor related protein 1, humanhuman

TSL 1 (best) BASIC

Gene LRP1, Length 2,169 nt, Biotype protein coding, Subcellular localisation Exosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LRP1-202ENST00000338962 RAB21Q9UL25 225 aa11.98□□□□□ -0.49
LRP1-202ENST00000338962 ATP8B3O60423 1300 aa11.98□□□□□ -0.49
LRP1-202ENST00000338962 PDE2AO00408 941 aaPredicted RBP11.98□□□□□ -0.49
LRP1-202ENST00000338962 DDX3XO00571 662 aaKnown RBP eCLIP11.98□□□□□ -0.497e-20■■■□□ 16.8
LRP1-202ENST00000338962 PMM2O15305 246 aa11.98□□□□□ -0.49
LRP1-202ENST00000338962 ATP8B1O43520 1251 aa11.98□□□□□ -0.49
LRP1-202ENST00000338962 NCK2O43639 380 aa11.98□□□□□ -0.49
LRP1-202ENST00000338962 GGPS1O95749 300 aa11.98□□□□□ -0.49
LRP1-202ENST00000338962 INHAP05111 366 aa11.98□□□□□ -0.49
LRP1-202ENST00000338962 PRKAR2AP13861 404 aaKnown RBP11.98□□□□□ -0.49
LRP1-202ENST00000338962 SCP2P22307 547 aa11.98□□□□□ -0.49
LRP1-202ENST00000338962 NOP2P46087 812 aaKnown RBP11.98□□□□□ -0.49
LRP1-202ENST00000338962 LIG4P49917 911 aa11.98□□□□□ -0.49
LRP1-202ENST00000338962 STRN3Q13033 797 aa11.98□□□□□ -0.49
LRP1-202ENST00000338962 KRT39Q6A163 491 aa11.98□□□□□ -0.49
LRP1-202ENST00000338962 SLC39A4Q6P5W5 647 aa11.98□□□□□ -0.49
LRP1-202ENST00000338962 GLYCTKQ8IVS8 523 aa11.98□□□□□ -0.49
LRP1-202ENST00000338962 PARD3BQ8TEW8 1205 aa11.98□□□□□ -0.49
LRP1-202ENST00000338962 U2AF1L4Q8WU68 220 aaKnown RBP11.98□□□□□ -0.49
LRP1-202ENST00000338962 SCFD2Q8WU76 684 aa11.98□□□□□ -0.49
LRP1-202ENST00000338962 TMEM143Q96AN5 459 aa11.98□□□□□ -0.49
LRP1-202ENST00000338962 ARMC5Q96C12 935 aa11.98□□□□□ -0.49
LRP1-202ENST00000338962 FBXL18Q96ME1 805 aa11.98□□□□□ -0.49
LRP1-202ENST00000338962 PDGFCQ9NRA1 345 aa11.98□□□□□ -0.49
LRP1-202ENST00000338962 RNF216Q9NWF9 866 aaPredicted RBP11.98□□□□□ -0.49
LRP1-202ENST00000338962 FAM53CQ9NYF3 392 aa11.98□□□□□ -0.49
LRP1-202ENST00000338962 ZNFX1Q9P2E3 1918 aaKnown RBP11.97□□□□□ -0.49
LRP1-202ENST00000338962 CASP8AP2Q9UKL3 1982 aa11.97□□□□□ -0.49
LRP1-202ENST00000338962 GSTTP1A0A1W2PQM5 241 aa11.97□□□□□ -0.49
LRP1-202ENST00000338962 FTCDO95954 541 aa11.97□□□□□ -0.49
LRP1-202ENST00000338962 CHRM1P11229 460 aaPredicted RBP11.97□□□□□ -0.49
LRP1-202ENST00000338962 GARTP22102 1010 aa11.97□□□□□ -0.49
LRP1-202ENST00000338962 TCF7P36402 384 aaPredicted RBP11.97□□□□□ -0.49
LRP1-202ENST00000338962 STAT5BP51692 787 aa11.97□□□□□ -0.49
LRP1-202ENST00000338962 CCDC70Q6NSX1 233 aa11.97□□□□□ -0.49
LRP1-202ENST00000338962 GPD1LQ8N335 351 aa11.97□□□□□ -0.49
LRP1-202ENST00000338962 NIFKQ9BYG3 293 aaKnown RBP11.97□□□□□ -0.49
LRP1-202ENST00000338962 AZI2Q9H6S1 392 aa11.97□□□□□ -0.49
LRP1-202ENST00000338962 NRBP2Q9NSY0 501 aa11.97□□□□□ -0.49
LRP1-202ENST00000338962 INTUQ9ULD6 942 aa11.97□□□□□ -0.49
LRP1-202ENST00000338962 NENFQ9UMX5 172 aa11.97□□□□□ -0.49
LRP1-202ENST00000338962 GRID2IPA4D2P6 1211 aa11.96□□□□□ -0.49
LRP1-202ENST00000338962 LRRIQ4A6NIV6 560 aa11.96□□□□□ -0.49
LRP1-202ENST00000338962 FOXN3O00409 490 aaPredicted RBP11.96□□□□□ -0.49
LRP1-202ENST00000338962 SEPT4O43236 478 aa11.96□□□□□ -0.49
LRP1-202ENST00000338962 DLATP10515 647 aaKnown RBP11.96□□□□□ -0.49
LRP1-202ENST00000338962 MCM3P25205 808 aa11.96□□□□□ -0.49
LRP1-202ENST00000338962 RFC5P40937 340 aa11.96□□□□□ -0.49
LRP1-202ENST00000338962 PAFAH1B1P43034 410 aa11.96□□□□□ -0.49
LRP1-202ENST00000338962 NAMPTP43490 491 aa11.96□□□□□ -0.49
LRP1-202ENST00000338962 VSNL1P62760 191 aa11.96□□□□□ -0.49
LRP1-202ENST00000338962 ITIH3Q06033 890 aa11.96□□□□□ -0.49
LRP1-202ENST00000338962 TTLL4Q14679 1199 aa11.96□□□□□ -0.49
LRP1-202ENST00000338962 TERF2Q15554 542 aa11.96□□□□□ -0.49
LRP1-202ENST00000338962 LY6KQ17RY6 165 aa11.96□□□□□ -0.49
LRP1-202ENST00000338962 ARHGEF19Q8IW93 802 aa11.96□□□□□ -0.49
LRP1-202ENST00000338962 DEPTORQ8TB45 409 aa11.96□□□□□ -0.49
LRP1-202ENST00000338962 TMC2Q8TDI7 906 aa11.96□□□□□ -0.49
LRP1-202ENST00000338962 SH3TC2Q8TF17 1288 aa11.96□□□□□ -0.49
LRP1-202ENST00000338962 HNRNPLLQ8WVV9 542 aaKnown RBP11.96□□□□□ -0.49
LRP1-202ENST00000338962 SEPT1Q8WYJ6 367 aa11.96□□□□□ -0.49
LRP1-202ENST00000338962 TMEM8AQ9HCN3 771 aa11.96□□□□□ -0.49
LRP1-202ENST00000338962 SEPT11Q9NVA2 429 aaKnown RBP11.96□□□□□ -0.49
LRP1-202ENST00000338962 LRRIQ3A6PVS8 624 aaPredicted RBP11.96□□□□□ -0.5
LRP1-202ENST00000338962 NOP56O00567 594 aaKnown RBP11.96□□□□□ -0.5
LRP1-202ENST00000338962 ARIH2O95376 493 aa11.96□□□□□ -0.5
LRP1-202ENST00000338962 AKR1A1P14550 325 aa11.96□□□□□ -0.5
LRP1-202ENST00000338962 GLRA2P23416 452 aa11.96□□□□□ -0.5
LRP1-202ENST00000338962 ADCYAP1R1P41586 468 aa11.96□□□□□ -0.5
LRP1-202ENST00000338962 DNA2P51530 1060 aa11.96□□□□□ -0.5
LRP1-202ENST00000338962 MCCD1P59942 119 aaPredicted RBP11.96□□□□□ -0.5
LRP1-202ENST00000338962 CYP24A1Q07973 514 aa11.96□□□□□ -0.5
LRP1-202ENST00000338962 LONRF2Q1L5Z9 754 aa11.96□□□□□ -0.5
LRP1-202ENST00000338962 CFAP221Q4G0U5 840 aa11.96□□□□□ -0.5
LRP1-202ENST00000338962 DUSP28Q4G0W2 176 aa11.96□□□□□ -0.5
LRP1-202ENST00000338962 WDR93Q6P2C0 686 aa11.96□□□□□ -0.5
LRP1-202ENST00000338962 TAS1R3Q7RTX0 852 aa11.96□□□□□ -0.5
LRP1-202ENST00000338962 ZNF572Q7Z3I7 529 aaPredicted RBP11.96□□□□□ -0.5
LRP1-202ENST00000338962 DNAAF5Q86Y56 855 aa11.96□□□□□ -0.5
LRP1-202ENST00000338962 PPM1KQ8N3J5 372 aa11.96□□□□□ -0.5
LRP1-202ENST00000338962 SLC30A5Q8TAD4 765 aa11.96□□□□□ -0.5
LRP1-202ENST00000338962 LNX1Q8TBB1 728 aaPredicted RBP11.96□□□□□ -0.5
LRP1-202ENST00000338962 AFAP1L1Q8TED9 768 aa11.96□□□□□ -0.5
LRP1-202ENST00000338962 ZNF333Q96JL9 665 aa11.96□□□□□ -0.5
LRP1-202ENST00000338962 MFSD14AQ96MC6 490 aa11.96□□□□□ -0.5
LRP1-202ENST00000338962 PCYT2Q99447 389 aa11.96□□□□□ -0.5
LRP1-202ENST00000338962 POP1Q99575 1024 aaKnown RBP11.96□□□□□ -0.5
LRP1-202ENST00000338962 FAM213AQ9BRX8 229 aa11.96□□□□□ -0.5
LRP1-202ENST00000338962 KIAA1586Q9HCI6 787 aa11.96□□□□□ -0.5
LRP1-202ENST00000338962 HMX1Q9NP08 348 aaPredicted RBP11.96□□□□□ -0.5
LRP1-202ENST00000338962 RNF14Q9UBS8 474 aa11.96□□□□□ -0.5
LRP1-202ENST00000338962 GNEQ9Y223 722 aaKnown RBP11.96□□□□□ -0.5
LRP1-202ENST00000338962 Q9Y3F1 56 aa11.96□□□□□ -0.5
LRP1-202ENST00000338962 CENPFP49454 3210 aa11.96□□□□□ -0.5
LRP1-202ENST00000338962 A0A0A6YYK5 440 aaPredicted RBP11.95□□□□□ -0.5
LRP1-202ENST00000338962 TARSL2A2RTX5 802 aaKnown RBP11.95□□□□□ -0.5
LRP1-202ENST00000338962 ZNF233A6NK53 670 aa11.95□□□□□ -0.5
LRP1-202ENST00000338962 K7ERI5 159 aa11.95□□□□□ -0.5
LRP1-202ENST00000338962 TNFAIP3P21580 790 aa11.95□□□□□ -0.5
LRP1-202ENST00000338962 GTF2H1P32780 548 aa11.95□□□□□ -0.5
Retrieved 100 of 20,778 RNA–protein pairs in 16.4 ms