RNA–Protein interactions for RNA: ENST00000338862.5

PCDH8-201, Transcript of protocadherin 8, humanhuman

APPRIS ALT1 TSL 1 (best) BASIC

Gene PCDH8, Length 3,708 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCDH8-201ENST00000338862 SLC10A5Q5PT55 438 aa15.08■□□□□ 0.01
PCDH8-201ENST00000338862 LMNTD2Q8IXW0 634 aa15.08■□□□□ 0.01
PCDH8-201ENST00000338862 ACER1Q8TDN7 264 aa15.08■□□□□ 0.01
PCDH8-201ENST00000338862 SDAD1Q9NVU7 687 aaKnown RBP eCLIP15.08■□□□□ 0.01
PCDH8-201ENST00000338862 HSPBP1Q9NZL4 362 aa15.08■□□□□ 0.01
PCDH8-201ENST00000338862 PCDHA2Q9Y5H9 948 aa15.08■□□□□ 0.01
PCDH8-201ENST00000338862 TJP1Q07157 1748 aa15.08■□□□□ 0.01
PCDH8-201ENST00000338862 ATP2A1O14983 1001 aa15.08■□□□□ 0
PCDH8-201ENST00000338862 KITP10721 976 aa15.08■□□□□ 0
PCDH8-201ENST00000338862 CALRP27797 417 aaKnown RBP15.08■□□□□ 0
PCDH8-201ENST00000338862 STRN3Q13033 797 aa15.08■□□□□ 0
PCDH8-201ENST00000338862 GPS1Q13098 491 aa15.08■□□□□ 0
PCDH8-201ENST00000338862 BBS9Q3SYG4 887 aa15.08■□□□□ 0
PCDH8-201ENST00000338862 SEZ6Q53EL9 994 aa15.08■□□□□ 0
PCDH8-201ENST00000338862 ZNF720Q7Z2F6 126 aa15.08■□□□□ 0
PCDH8-201ENST00000338862 HAUS6Q7Z4H7 955 aa15.08■□□□□ 0
PCDH8-201ENST00000338862 HIPK4Q8NE63 616 aa15.08■□□□□ 0
PCDH8-201ENST00000338862 UBN1Q9NPG3 1134 aa15.08■□□□□ 0
PCDH8-201ENST00000338862 PI4KBQ9UBF8 816 aa15.08■□□□□ 0
PCDH8-201ENST00000338862 CASZ1Q86V15 1759 aa15.08■□□□□ 0
PCDH8-201ENST00000338862 SPATA31A1Q5TZJ5 1347 aa15.08■□□□□ 0
PCDH8-201ENST00000338862 LRRD1A4D1F6 860 aa15.08■□□□□ 0
PCDH8-201ENST00000338862 TM4SF1P30408 202 aa15.08■□□□□ 0
PCDH8-201ENST00000338862 PRELPP51888 382 aa15.08■□□□□ 0
PCDH8-201ENST00000338862 BIRC2Q13490 618 aa15.08■□□□□ 0
PCDH8-201ENST00000338862 ANKRD20A3Q5VUR7 823 aa15.08■□□□□ 0
PCDH8-201ENST00000338862 CYFIP1Q7L576 1253 aa15.08■□□□□ 0
PCDH8-201ENST00000338862 ANKRD35Q8N283 1001 aa15.08■□□□□ 0
PCDH8-201ENST00000338862 TTC17Q96AE7 1141 aa15.08■□□□□ 0
PCDH8-201ENST00000338862 PRR12Q9ULL5 1215 aa15.08■□□□□ 0
PCDH8-201ENST00000338862 NAALADL1Q9UQQ1 740 aa15.08■□□□□ 0
PCDH8-201ENST00000338862 PCDHB4Q9Y5E5 795 aa15.08■□□□□ 0
PCDH8-201ENST00000338862 RPTORQ8N122 1335 aa15.08■□□□□ 0
PCDH8-201ENST00000338862 RTN2O75298 545 aa15.07■□□□□ 0
PCDH8-201ENST00000338862 BANF1O75531 89 aa15.07■□□□□ 0
PCDH8-201ENST00000338862 RARGP13631 454 aa15.07■□□□□ 0
PCDH8-201ENST00000338862 CD19P15391 556 aa15.07■□□□□ 0
PCDH8-201ENST00000338862 CCDC17Q96LX7 622 aa15.07■□□□□ 0
PCDH8-201ENST00000338862 ACCSQ96QU6 501 aa15.07■□□□□ 0
PCDH8-201ENST00000338862 PCDHB18PQ96TA0 734 aa15.07■□□□□ 0
PCDH8-201ENST00000338862 P2RX7Q99572 595 aaKnown RBP15.07■□□□□ 0
PCDH8-201ENST00000338862 EHMT1Q9H9B1 1298 aa15.07■□□□□ 0
PCDH8-201ENST00000338862 C1orf112Q9NSG2 853 aa15.07■□□□□ 0
PCDH8-201ENST00000338862 SUGT1Q9Y2Z0 365 aa15.07■□□□□ 0
PCDH8-201ENST00000338862 RRM1P23921 792 aa15.07■□□□□ 0
PCDH8-201ENST00000338862 PRKCIP41743 596 aa15.07■□□□□ 0
PCDH8-201ENST00000338862 AP3B2Q13367 1082 aa15.07■□□□□ 0
PCDH8-201ENST00000338862 ZDHHC24Q6UX98 284 aa15.07■□□□□ 0
PCDH8-201ENST00000338862 CROCCP2Q86T23 111 aa15.07■□□□□ 0
PCDH8-201ENST00000338862 CERS5Q8N5B7 392 aa15.07■□□□□ 0
PCDH8-201ENST00000338862 PPP1R14CQ8TAE6 165 aa15.07■□□□□ 0
PCDH8-201ENST00000338862 KCNMB3Q9NPA1 279 aa15.07■□□□□ 0
PCDH8-201ENST00000338862 CCPG1Q9ULG6 757 aa15.07■□□□□ 0
PCDH8-201ENST00000338862 C15orf41Q9Y2V0 281 aa15.07■□□□□ 0
PCDH8-201ENST00000338862 F5H423 210 aaPredicted RBP15.07■□□□□ 0
PCDH8-201ENST00000338862 ETS1P14921 441 aa15.07■□□□□ 0
PCDH8-201ENST00000338862 GSCP56915 257 aaPredicted RBP15.07■□□□□ 0
PCDH8-201ENST00000338862 ATP13A4Q4VNC1 1196 aa15.07■□□□□ 0
PCDH8-201ENST00000338862 FYB2Q5VWT5 728 aa15.07■□□□□ 0
PCDH8-201ENST00000338862 TMEM270Q6UE05 265 aa15.07■□□□□ 0
PCDH8-201ENST00000338862 FITM2Q8N6M3 262 aa15.07■□□□□ 0
PCDH8-201ENST00000338862 SNF8Q96H20 258 aa15.07■□□□□ 0
PCDH8-201ENST00000338862 ZWILCHQ9H900 591 aa15.07■□□□□ 0
PCDH8-201ENST00000338862 NCALDP61601 193 aa15.06■□□□□ 0
PCDH8-201ENST00000338862 XRCC4Q13426 336 aa15.06■□□□□ 0
PCDH8-201ENST00000338862 SPOPLQ6IQ16 392 aa15.06■□□□□ 0
PCDH8-201ENST00000338862 SCARA5Q6ZMJ2 495 aa15.06■□□□□ 0
PCDH8-201ENST00000338862 ZC3H18Q86VM9 953 aaKnown RBP15.06■□□□□ 0
PCDH8-201ENST00000338862 PALM2Q8IXS6 379 aa15.06■□□□□ 0
PCDH8-201ENST00000338862 CYP4X1Q8N118 509 aa15.06■□□□□ 0
PCDH8-201ENST00000338862 TAS1R2Q8TE23 839 aa15.06■□□□□ 0
PCDH8-201ENST00000338862 RAB3IPQ96QF0 476 aaPredicted RBP15.06■□□□□ 0
PCDH8-201ENST00000338862 CICQ96RK0 1608 aaPredicted RBP15.06■□□□□ 0
PCDH8-201ENST00000338862 SLC16A3O15427 465 aaKnown RBP15.06■□□□□ 0
PCDH8-201ENST00000338862 MMP13P45452 471 aa15.06■□□□□ 0
PCDH8-201ENST00000338862 LRRC36Q1X8D7 754 aa15.06■□□□□ 0
PCDH8-201ENST00000338862 COL23A1Q86Y22 540 aaPredicted RBP15.06■□□□□ 0
PCDH8-201ENST00000338862 WNT8AQ9H1J5 351 aa15.06■□□□□ 0
PCDH8-201ENST00000338862 UNC45AQ9H3U1 944 aa15.06■□□□□ 0
PCDH8-201ENST00000338862 GINM1Q9NU53 330 aa15.06■□□□□ 0
PCDH8-201ENST00000338862 SIPA1L3O60292 1781 aaPredicted RBP15.06■□□□□ 0
PCDH8-201ENST00000338862 CFAP73A6NFT4 308 aa15.06■□□□□ 0
PCDH8-201ENST00000338862 PPIP5K2O43314 1243 aa15.06■□□□□ 0
PCDH8-201ENST00000338862 HSPA6P17066 643 aa15.06■□□□□ 0
PCDH8-201ENST00000338862 VCAM1P19320 739 aa15.06■□□□□ 0
PCDH8-201ENST00000338862 EPHB2P29323 1055 aa15.06■□□□□ 0
PCDH8-201ENST00000338862 CEP55Q53EZ4 464 aa15.06■□□□□ 0
PCDH8-201ENST00000338862 COBLL1Q53SF7 1204 aa15.06■□□□□ 0
PCDH8-201ENST00000338862 TRABDQ9H4I3 376 aa15.06■□□□□ 0
PCDH8-201ENST00000338862 PPP1R1BQ9UD71 204 aaPredicted RBP15.06■□□□□ 0
PCDH8-201ENST00000338862 MARCOQ9UEW3 520 aaPredicted RBP15.06■□□□□ 0
PCDH8-201ENST00000338862 KIF13AQ9H1H9 1805 aa15.06■□□□□ 0
PCDH8-201ENST00000338862 DENND3A2RUS2 1198 aa15.05■□□□□ 0
PCDH8-201ENST00000338862 KRT1P04264 644 aa15.05■□□□□ 0
PCDH8-201ENST00000338862 ACOT2P49753 483 aa15.05■□□□□ 0
PCDH8-201ENST00000338862 BASP1P80723 227 aaKnown RBP15.05■□□□□ 0
PCDH8-201ENST00000338862 PDIA2Q13087 525 aaKnown RBP15.05■□□□□ 0
PCDH8-201ENST00000338862 TSNAXIP1Q2TAA8 658 aa15.05■□□□□ 0
PCDH8-201ENST00000338862 ISLR2Q6UXK2 745 aa15.05■□□□□ 0
PCDH8-201ENST00000338862 PPP1R21Q6ZMI0 780 aa15.05■□□□□ 0
Retrieved 100 of 20,778 RNA–protein pairs in 40.3 ms