RNA–Protein interactions for RNA: ENST00000336904.7

SNCA-201, Transcript of synuclein alpha, humanhuman

APPRIS P1 TSL 2 BASIC

Gene SNCA, Length 3,041 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Synapse .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNCA-201ENST00000336904 RNF19AQ9NV58 838 aa9.52□□□□□ -0.89
SNCA-201ENST00000336904 USTQ9Y2C2 406 aa9.52□□□□□ -0.89
SNCA-201ENST00000336904 SNCAIPQ9Y6H5 919 aa9.52□□□□□ -0.89
SNCA-201ENST00000336904 UBE4BO95155 1302 aa9.52□□□□□ -0.89
SNCA-201ENST00000336904 ANKRD62A6NC57 917 aa9.52□□□□□ -0.89
SNCA-201ENST00000336904 FOXO6A8MYZ6 492 aa9.52□□□□□ -0.89
SNCA-201ENST00000336904 UBA1P22314 1058 aaKnown RBP9.52□□□□□ -0.89
SNCA-201ENST00000336904 GLRA2P23416 452 aa9.52□□□□□ -0.89
SNCA-201ENST00000336904 SFNP31947 248 aa9.52□□□□□ -0.89
SNCA-201ENST00000336904 ACTN2P35609 894 aa9.52□□□□□ -0.89
SNCA-201ENST00000336904 PIK3CAP42336 1068 aa9.52□□□□□ -0.89
SNCA-201ENST00000336904 PLTPP55058 493 aa9.52□□□□□ -0.89
SNCA-201ENST00000336904 IFI16Q16666 785 aaKnown RBP9.52□□□□□ -0.89
SNCA-201ENST00000336904 ABHD15Q6UXT9 468 aa9.52□□□□□ -0.89
SNCA-201ENST00000336904 OTUD6AQ7L8S5 288 aa9.52□□□□□ -0.89
SNCA-201ENST00000336904 NIPA1Q7RTP0 329 aa9.52□□□□□ -0.89
SNCA-201ENST00000336904 FBXL13Q8NEE6 735 aa9.52□□□□□ -0.89
SNCA-201ENST00000336904 C1orf54Q8WWF1 131 aa9.52□□□□□ -0.89
SNCA-201ENST00000336904 NT5C1BQ96P26 610 aa9.52□□□□□ -0.89
SNCA-201ENST00000336904 TXNRD2Q9NNW7 524 aa9.52□□□□□ -0.89
SNCA-201ENST00000336904 TMEM59LQ9UK28 342 aa9.52□□□□□ -0.89
SNCA-201ENST00000336904 TRPC6Q9Y210 931 aa9.52□□□□□ -0.89
SNCA-201ENST00000336904 MYH9P35579 1960 aaKnown RBP9.52□□□□□ -0.89
SNCA-201ENST00000336904 PHIPQ8WWQ0 1821 aa9.51□□□□□ -0.89
SNCA-201ENST00000336904 RPS12P25398 132 aaKnown RBP9.51□□□□□ -0.89
SNCA-201ENST00000336904 HOXA7P31268 230 aaPredicted RBP9.51□□□□□ -0.89
SNCA-201ENST00000336904 HSD17B3P37058 310 aa9.51□□□□□ -0.89
SNCA-201ENST00000336904 PDE6CP51160 858 aa9.51□□□□□ -0.89
SNCA-201ENST00000336904 HSDL1Q3SXM5 330 aa9.51□□□□□ -0.89
SNCA-201ENST00000336904 C10orf76Q5T2E6 689 aa9.51□□□□□ -0.89
SNCA-201ENST00000336904 TDRD10Q5VZ19 366 aaKnown RBP9.51□□□□□ -0.89
SNCA-201ENST00000336904 TTC27Q6P3X3 843 aa9.51□□□□□ -0.89
SNCA-201ENST00000336904 SLFN11Q7Z7L1 901 aa9.51□□□□□ -0.89
SNCA-201ENST00000336904 CCDC25Q86WR0 208 aa9.51□□□□□ -0.89
SNCA-201ENST00000336904 FBXO16Q8IX29 292 aaPredicted RBP9.51□□□□□ -0.89
SNCA-201ENST00000336904 GPD1LQ8N335 351 aa9.51□□□□□ -0.89
SNCA-201ENST00000336904 CEP120Q8N960 986 aa9.51□□□□□ -0.89
SNCA-201ENST00000336904 ZNF564Q8TBZ8 553 aaPredicted RBP9.51□□□□□ -0.89
SNCA-201ENST00000336904 IFT74Q96LB3 600 aa9.51□□□□□ -0.89
SNCA-201ENST00000336904 PWWP2AQ96N64 755 aa9.51□□□□□ -0.89
SNCA-201ENST00000336904 FNBP1Q96RU3 617 aa9.51□□□□□ -0.89
SNCA-201ENST00000336904 TAF1DQ9H5J8 278 aaPredicted RBP9.51□□□□□ -0.89
SNCA-201ENST00000336904 SUCLA2Q9P2R7 463 aaPredicted RBP9.51□□□□□ -0.89
SNCA-201ENST00000336904 SOWAHBA6NEL2 793 aa9.51□□□□□ -0.89
SNCA-201ENST00000336904 CLDN3O15551 220 aa9.51□□□□□ -0.89
SNCA-201ENST00000336904 GGPS1O95749 300 aa9.51□□□□□ -0.89
SNCA-201ENST00000336904 TUBBP07437 444 aa9.51□□□□□ -0.89
SNCA-201ENST00000336904 SUPT20HL2P0C7V6 817 aa9.51□□□□□ -0.89
SNCA-201ENST00000336904 Q3C1V9 767 aa9.51□□□□□ -0.89
SNCA-201ENST00000336904 SUPT20HL1Q3ZLR7 823 aa9.51□□□□□ -0.89
SNCA-201ENST00000336904 EMBQ6PCB8 327 aa9.51□□□□□ -0.89
SNCA-201ENST00000336904 TMEM270Q6UE05 265 aa9.51□□□□□ -0.89
SNCA-201ENST00000336904 DEPTORQ8TB45 409 aa9.51□□□□□ -0.89
SNCA-201ENST00000336904 BBXQ8WY36 941 aaPredicted RBP9.51□□□□□ -0.89
SNCA-201ENST00000336904 GPRASP2Q96D09 838 aa9.51□□□□□ -0.89
SNCA-201ENST00000336904 CYFIP2Q96F07 1278 aa9.51□□□□□ -0.89
SNCA-201ENST00000336904 PBKQ96KB5 322 aa9.51□□□□□ -0.89
SNCA-201ENST00000336904 PCYT2Q99447 389 aa9.51□□□□□ -0.89
SNCA-201ENST00000336904 C11orf70Q9BRQ4 267 aa9.51□□□□□ -0.89
SNCA-201ENST00000336904 HERPUD2Q9BSE4 406 aa9.51□□□□□ -0.89
SNCA-201ENST00000336904 VIPAS39Q9H9C1 493 aa9.51□□□□□ -0.89
SNCA-201ENST00000336904 ANKEF1Q9NU02 776 aa9.51□□□□□ -0.89
SNCA-201ENST00000336904 CNOT8Q9UFF9 292 aaKnown RBP9.51□□□□□ -0.89
SNCA-201ENST00000336904 ANAPC7Q9UJX3 599 aa9.51□□□□□ -0.89
SNCA-201ENST00000336904 RLFQ13129 1914 aa9.51□□□□□ -0.89
SNCA-201ENST00000336904 WDR81Q562E7 1941 aa9.51□□□□□ -0.89
SNCA-201ENST00000336904 TLDC2A0PJX2 215 aa9.5□□□□□ -0.89
SNCA-201ENST00000336904 CCDC66A2RUB6 948 aa9.5□□□□□ -0.89
SNCA-201ENST00000336904 HLA-DRAP01903 254 aa9.5□□□□□ -0.89
SNCA-201ENST00000336904 RRM1P23921 792 aa9.5□□□□□ -0.89
SNCA-201ENST00000336904 CTNNA1P35221 906 aaKnown RBP9.5□□□□□ -0.89
SNCA-201ENST00000336904 TCF7P36402 384 aaPredicted RBP9.5□□□□□ -0.89
SNCA-201ENST00000336904 SLCO1A2P46721 670 aa9.5□□□□□ -0.89
SNCA-201ENST00000336904 CCT5P48643 541 aa9.5□□□□□ -0.89
SNCA-201ENST00000336904 SEC24CP53992 1094 aa9.5□□□□□ -0.89
SNCA-201ENST00000336904 GPC5P78333 572 aa9.5□□□□□ -0.89
SNCA-201ENST00000336904 STXBP2Q15833 593 aa9.5□□□□□ -0.89
SNCA-201ENST00000336904 NFIL3Q16649 462 aa9.5□□□□□ -0.89
SNCA-201ENST00000336904 ZFYVE27Q5T4F4 411 aa9.5□□□□□ -0.89
SNCA-201ENST00000336904 C10orf67Q8IYJ2 551 aa9.5□□□□□ -0.89
SNCA-201ENST00000336904 FAM71AQ8IYT1 594 aa9.5□□□□□ -0.89
SNCA-201ENST00000336904 ACTRT1Q8TDG2 376 aa9.5□□□□□ -0.89
SNCA-201ENST00000336904 LMBR1Q8WVP7 490 aa9.5□□□□□ -0.89
SNCA-201ENST00000336904 NLRP4Q96MN2 994 aa9.5□□□□□ -0.89
SNCA-201ENST00000336904 APOBEC3GQ9HC16 384 aaKnown RBP9.5□□□□□ -0.89
SNCA-201ENST00000336904 PDGFCQ9NRA1 345 aa9.5□□□□□ -0.89
SNCA-201ENST00000336904 AGO2Q9UKV8 859 aaKnown RBP9.5□□□□□ -0.89
SNCA-201ENST00000336904 ZNFX1Q9P2E3 1918 aaKnown RBP9.5□□□□□ -0.89
SNCA-201ENST00000336904 SYNGAP1Q96PV0 1343 aa9.5□□□□□ -0.89
SNCA-201ENST00000336904 MCM3APO60318 1980 aa9.5□□□□□ -0.89
SNCA-201ENST00000336904 K7ERI5 159 aa9.5□□□□□ -0.89
SNCA-201ENST00000336904 DGAT1O75907 488 aa9.5□□□□□ -0.89
SNCA-201ENST00000336904 LYPLA2O95372 231 aa9.5□□□□□ -0.89
SNCA-201ENST00000336904 SHBGP04278 402 aa9.5□□□□□ -0.89
SNCA-201ENST00000336904 MUTP22033 750 aa9.5□□□□□ -0.89
SNCA-201ENST00000336904 TMOD1P28289 359 aa9.5□□□□□ -0.89
SNCA-201ENST00000336904 MFAP3P55082 362 aa9.5□□□□□ -0.89
SNCA-201ENST00000336904 DR1Q01658 176 aa9.5□□□□□ -0.89
SNCA-201ENST00000336904 ITIH3Q06033 890 aa9.5□□□□□ -0.89
SNCA-201ENST00000336904 TMEM132AQ24JP5 1023 aa9.5□□□□□ -0.89
Retrieved 100 of 20,778 RNA–protein pairs in 22.5 ms