RNA–Protein interactions for RNA: ENST00000336216.8

HMG20A-201, Transcript of high mobility group 20A, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene HMG20A, Length 4,046 nt, Biotype protein coding, Subcellular localisation Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMG20A-201ENST00000336216 SLC18A3Q16572 532 aa6.91□□□□□ -1.3
HMG20A-201ENST00000336216 MEA1Q16626 185 aa6.91□□□□□ -1.3
HMG20A-201ENST00000336216 WDR72Q3MJ13 1102 aa6.91□□□□□ -1.3
HMG20A-201ENST00000336216 ZNF568Q3ZCX4 644 aa6.91□□□□□ -1.3
HMG20A-201ENST00000336216 DNAJC24Q6P3W2 148 aa6.91□□□□□ -1.3
HMG20A-201ENST00000336216 LRRC34Q8IZ02 419 aa6.91□□□□□ -1.3
HMG20A-201ENST00000336216 ANKS1AQ92625 1134 aa6.91□□□□□ -1.3
HMG20A-201ENST00000336216 SPATA33Q96N06 139 aa6.91□□□□□ -1.3
HMG20A-201ENST00000336216 XPO6Q96QU8 1125 aaKnown RBP6.91□□□□□ -1.3
HMG20A-201ENST00000336216 NUP85Q9BW27 656 aa6.91□□□□□ -1.3
HMG20A-201ENST00000336216 TEX13BQ9BXU2 312 aa6.91□□□□□ -1.3
HMG20A-201ENST00000336216 ATP6V0A4Q9HBG4 840 aa6.91□□□□□ -1.3
HMG20A-201ENST00000336216 RBAKQ9NYW8 714 aaPredicted RBP6.91□□□□□ -1.3
HMG20A-201ENST00000336216 NUP98P52948 1817 aa6.91□□□□□ -1.3
HMG20A-201ENST00000336216 FOXN3O00409 490 aaPredicted RBP6.91□□□□□ -1.3
HMG20A-201ENST00000336216 SMIM24O75264 130 aa6.91□□□□□ -1.3
HMG20A-201ENST00000336216 FSBPO95073 299 aa6.91□□□□□ -1.3
HMG20A-201ENST00000336216 CPP00450 1065 aa6.91□□□□□ -1.3
HMG20A-201ENST00000336216 CALCAP01258 141 aa6.91□□□□□ -1.3
HMG20A-201ENST00000336216 WEE2P0C1S8 567 aa6.91□□□□□ -1.3
HMG20A-201ENST00000336216 FLT3P36888 993 aa6.91□□□□□ -1.3
HMG20A-201ENST00000336216 STAT5BP51692 787 aa6.91□□□□□ -1.3
HMG20A-201ENST00000336216 SKOR1P84550 965 aa6.91□□□□□ -1.3
HMG20A-201ENST00000336216 GIT2Q14161 759 aa6.91□□□□□ -1.3
HMG20A-201ENST00000336216 SNRNP35Q16560 246 aaKnown RBP6.91□□□□□ -1.3
HMG20A-201ENST00000336216 ACCSLQ4AC99 568 aa6.91□□□□□ -1.3
HMG20A-201ENST00000336216 AP1ARQ63HQ0 302 aa6.91□□□□□ -1.3
HMG20A-201ENST00000336216 DLK2Q6UY11 383 aa6.91□□□□□ -1.3
HMG20A-201ENST00000336216 TAOK1Q7L7X3 1001 aa6.91□□□□□ -1.3
HMG20A-201ENST00000336216 CCNYQ8ND76 341 aa6.91□□□□□ -1.3
HMG20A-201ENST00000336216 SLC35G2Q8TBE7 412 aa6.91□□□□□ -1.3
HMG20A-201ENST00000336216 HSPH1Q92598 858 aa6.91□□□□□ -1.3
HMG20A-201ENST00000336216 ACSF2Q96CM8 615 aaPredicted RBP6.91□□□□□ -1.3
HMG20A-201ENST00000336216 SHISA4Q96DD7 197 aa6.91□□□□□ -1.3
HMG20A-201ENST00000336216 MXRA8Q9BRK3 442 aa6.91□□□□□ -1.3
HMG20A-201ENST00000336216 TMBIM4Q9HC24 238 aa6.91□□□□□ -1.3
HMG20A-201ENST00000336216 HOMER3Q9NSC5 361 aa6.91□□□□□ -1.3
HMG20A-201ENST00000336216 KLHL14Q9P2G3 628 aa6.91□□□□□ -1.3
HMG20A-201ENST00000336216 AGO2Q9UKV8 859 aaKnown RBP6.91□□□□□ -1.3
HMG20A-201ENST00000336216 DNM1LO00429 736 aa6.91□□□□□ -1.3
HMG20A-201ENST00000336216 KIF1CO43896 1103 aaKnown RBP6.91□□□□□ -1.3
HMG20A-201ENST00000336216 SHOX2O60902 331 aaPredicted RBP6.91□□□□□ -1.3
HMG20A-201ENST00000336216 GRAP2O75791 330 aa6.91□□□□□ -1.3
HMG20A-201ENST00000336216 SUN1O94901 812 aa6.91□□□□□ -1.3
HMG20A-201ENST00000336216 TXNP10599 105 aaKnown RBP6.91□□□□□ -1.3
HMG20A-201ENST00000336216 IRX4P78413 519 aa6.91□□□□□ -1.3
HMG20A-201ENST00000336216 HHATQ5VTY9 493 aa6.91□□□□□ -1.3
HMG20A-201ENST00000336216 KRT39Q6A163 491 aa6.91□□□□□ -1.3
HMG20A-201ENST00000336216 CENPPQ6IPU0 288 aa6.91□□□□□ -1.3
HMG20A-201ENST00000336216 MSL3Q8N5Y2 521 aaKnown RBP6.91□□□□□ -1.3
HMG20A-201ENST00000336216 OR6B3Q8NGW1 331 aa6.91□□□□□ -1.3
HMG20A-201ENST00000336216 PRCCQ92733 491 aaPredicted RBP6.91□□□□□ -1.3
HMG20A-201ENST00000336216 PBKQ96KB5 322 aa6.91□□□□□ -1.3
HMG20A-201ENST00000336216 BUD13Q9BRD0 619 aaKnown RBP eCLIP6.91□□□□□ -1.3
HMG20A-201ENST00000336216 DDX23Q9BUQ8 820 aaKnown RBP6.91□□□□□ -1.3
HMG20A-201ENST00000336216 TRIM7Q9C029 511 aa6.91□□□□□ -1.3
HMG20A-201ENST00000336216 STMN4Q9H169 189 aaPredicted RBP6.91□□□□□ -1.3
HMG20A-201ENST00000336216 ECT2Q9H8V3 914 aa6.91□□□□□ -1.3
HMG20A-201ENST00000336216 KIF9Q9HAQ2 790 aa6.91□□□□□ -1.3
HMG20A-201ENST00000336216 FAM114A2Q9NRY5 505 aa6.91□□□□□ -1.3
HMG20A-201ENST00000336216 TOPORSQ9NS56 1045 aaPredicted RBP6.91□□□□□ -1.3
HMG20A-201ENST00000336216 FGFR1OP2Q9NVK5 253 aa6.91□□□□□ -1.3
HMG20A-201ENST00000336216 NOP53Q9NZM5 478 aaKnown RBP6.91□□□□□ -1.3
HMG20A-201ENST00000336216 INTUQ9ULD6 942 aa6.91□□□□□ -1.3
HMG20A-201ENST00000336216 FNDC3AQ9Y2H6 1198 aaKnown RBP6.91□□□□□ -1.3
HMG20A-201ENST00000336216 HEY1Q9Y5J3 304 aa6.91□□□□□ -1.3
HMG20A-201ENST00000336216 MAP1BP46821 2468 aaKnown RBP6.9□□□□□ -1.3
HMG20A-201ENST00000336216 TCP11X1B4DZS4 312 aa6.9□□□□□ -1.3
HMG20A-201ENST00000336216 KLRC4O43908 158 aa6.9□□□□□ -1.3
HMG20A-201ENST00000336216 MAP3K6O95382 1288 aa6.9□□□□□ -1.3
HMG20A-201ENST00000336216 ANP32DO95626 131 aa6.9□□□□□ -1.3
HMG20A-201ENST00000336216 KRT1P04264 644 aa6.9□□□□□ -1.3
HMG20A-201ENST00000336216 ATP2A2P16615 1042 aaKnown RBP6.9□□□□□ -1.3
HMG20A-201ENST00000336216 SOX5P35711 763 aa6.9□□□□□ -1.3
HMG20A-201ENST00000336216 YWHAGP61981 247 aaKnown RBP eCLIP6.9□□□□□ -1.3
HMG20A-201ENST00000336216 GPC5P78333 572 aa6.9□□□□□ -1.3
HMG20A-201ENST00000336216 ZNF844Q08AG5 666 aa6.9□□□□□ -1.3
HMG20A-201ENST00000336216 SLC29A2Q14542 456 aa6.9□□□□□ -1.3
HMG20A-201ENST00000336216 BBS9Q3SYG4 887 aa6.9□□□□□ -1.3
HMG20A-201ENST00000336216 ANKRD20A8PQ5CZ79 823 aa6.9□□□□□ -1.3
HMG20A-201ENST00000336216 MIIPQ5JXC2 388 aa6.9□□□□□ -1.3
HMG20A-201ENST00000336216 CAPRIN2Q6IMN6 1127 aaKnown RBP6.9□□□□□ -1.3
HMG20A-201ENST00000336216 CATSPER4Q7RTX7 472 aa6.9□□□□□ -1.3
HMG20A-201ENST00000336216 RFX6Q8HWS3 928 aa6.9□□□□□ -1.3
HMG20A-201ENST00000336216 IQCKQ8N0W5 287 aa6.9□□□□□ -1.3
HMG20A-201ENST00000336216 SYT2Q8N9I0 419 aaPredicted RBP6.9□□□□□ -1.3
HMG20A-201ENST00000336216 SLC17A8Q8NDX2 589 aa6.9□□□□□ -1.3
HMG20A-201ENST00000336216 FBXL13Q8NEE6 735 aa6.9□□□□□ -1.3
HMG20A-201ENST00000336216 MCPH1Q8NEM0 835 aa6.9□□□□□ -1.3
HMG20A-201ENST00000336216 PSPC1Q8WXF1 523 aaKnown RBP6.9□□□□□ -1.3
HMG20A-201ENST00000336216 HAS1Q92839 578 aa6.9□□□□□ -1.3
HMG20A-201ENST00000336216 CAVIN3Q969G5 261 aa6.9□□□□□ -1.3
HMG20A-201ENST00000336216 ZBTB10Q96DT7 871 aa6.9□□□□□ -1.3
HMG20A-201ENST00000336216 MIS12Q9H081 205 aa6.9□□□□□ -1.3
HMG20A-201ENST00000336216 OSGEPQ9NPF4 335 aa6.9□□□□□ -1.3
HMG20A-201ENST00000336216 ESYT2A0FGR8 921 aa6.9□□□□□ -1.3
HMG20A-201ENST00000336216 CCT8L1PA6NM43 557 aa6.9□□□□□ -1.3
HMG20A-201ENST00000336216 ECEL1O95672 775 aa6.9□□□□□ -1.3
HMG20A-201ENST00000336216 PMS2P54278 862 aa6.9□□□□□ -1.3
HMG20A-201ENST00000336216 ARPP19P56211 112 aa6.9□□□□□ -1.3
Retrieved 100 of 20,778 RNA–protein pairs in 20.2 ms