RNA–Protein interactions for RNA: ENST00000334895.9

TPM1-204, Transcript of tropomyosin 1, humanhuman

TSL 1 (best) BASIC

Gene TPM1, Length 1,637 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TPM1-204ENST00000334895 CHST12Q9NRB3 414 aa23.42■■□□□ 1.34
TPM1-204ENST00000334895 PCDH10Q9P2E7 1040 aa23.42■■□□□ 1.34
TPM1-204ENST00000334895 LTBP2Q14767 1821 aa23.42■■□□□ 1.34
TPM1-204ENST00000334895 KIAA0355O15063 1070 aa23.41■■□□□ 1.34
TPM1-204ENST00000334895 MEFVO15553 781 aaPredicted RBP23.41■■□□□ 1.34
TPM1-204ENST00000334895 MCCD1P59942 119 aaPredicted RBP23.41■■□□□ 1.34
TPM1-204ENST00000334895 OSTNP61366 133 aa23.41■■□□□ 1.34
TPM1-204ENST00000334895 PLCB2Q00722 1185 aa23.41■■□□□ 1.34
TPM1-204ENST00000334895 CYP24A1Q07973 514 aa23.41■■□□□ 1.34
TPM1-204ENST00000334895 MIIPQ5JXC2 388 aa23.41■■□□□ 1.34
TPM1-204ENST00000334895 IFIH1Q9BYX4 1025 aaKnown RBP23.41■■□□□ 1.34
TPM1-204ENST00000334895 METTL14Q9HCE5 456 aaKnown RBP23.41■■□□□ 1.34
TPM1-204ENST00000334895 INTS13Q9NVM9 706 aa23.41■■□□□ 1.34
TPM1-204ENST00000334895 ANK1P16157 1881 aa23.41■■□□□ 1.34
TPM1-204ENST00000334895 ZNF233A6NK53 670 aa23.41■■□□□ 1.34
TPM1-204ENST00000334895 VPS16Q9H269 839 aa23.41■■□□□ 1.34
TPM1-204ENST00000334895 IFNKQ9P0W0 207 aa23.41■■□□□ 1.34
TPM1-204ENST00000334895 SERPINC1P01008 464 aa23.4■■□□□ 1.34
TPM1-204ENST00000334895 STAG3L1P0CL83 205 aa23.4■■□□□ 1.34
TPM1-204ENST00000334895 DLG4P78352 724 aa23.4■■□□□ 1.34
TPM1-204ENST00000334895 BFSP1Q12934 665 aa23.4■■□□□ 1.34
TPM1-204ENST00000334895 MAN2A1Q16706 1144 aa23.4■■□□□ 1.34
TPM1-204ENST00000334895 TCTN1Q2MV58 587 aa23.4■■□□□ 1.34
TPM1-204ENST00000334895 PLEKHG4Q58EX7 1191 aa23.4■■□□□ 1.34
TPM1-204ENST00000334895 C1orf220Q5T0J3 134 aa23.4■■□□□ 1.34
TPM1-204ENST00000334895 TWF2Q6IBS0 349 aaKnown RBP23.4■■□□□ 1.34
TPM1-204ENST00000334895 INTS8Q75QN2 995 aaKnown RBP23.4■■□□□ 1.34
TPM1-204ENST00000334895 SLC35C1Q96A29 364 aa23.4■■□□□ 1.34
TPM1-204ENST00000334895 VWCEQ96DN2 955 aa23.4■■□□□ 1.34
TPM1-204ENST00000334895 PRDM5Q9NQX1 630 aaPredicted RBP23.4■■□□□ 1.34
TPM1-204ENST00000334895 RBAKQ9NYW8 714 aaPredicted RBP23.4■■□□□ 1.34
TPM1-204ENST00000334895 HES2Q9Y543 173 aa23.4■■□□□ 1.34
TPM1-204ENST00000334895 A0A1B0GTH6 734 aa23.39■■□□□ 1.33
TPM1-204ENST00000334895 CXCL10P02778 98 aa23.39■■□□□ 1.33
TPM1-204ENST00000334895 PRKCSHP14314 528 aaPredicted RBP23.39■■□□□ 1.33
TPM1-204ENST00000334895 GRM5P41594 1212 aa23.39■■□□□ 1.33
TPM1-204ENST00000334895 ENOX2Q16206 610 aaKnown RBP23.39■■□□□ 1.33
TPM1-204ENST00000334895 BRSK2Q8IWQ3 736 aa23.39■■□□□ 1.33
TPM1-204ENST00000334895 SMG8Q8ND04 991 aaKnown RBP23.39■■□□□ 1.33
TPM1-204ENST00000334895 ANKRD20A12PQ8NF67 263 aa23.39■■□□□ 1.33
TPM1-204ENST00000334895 LINC01599Q8WXQ3 324 aa23.39■■□□□ 1.33
TPM1-204ENST00000334895 XPO4Q9C0E2 1151 aaKnown RBP23.39■■□□□ 1.33
TPM1-204ENST00000334895 NXF3Q9H4D5 531 aaKnown RBP23.39■■□□□ 1.33
TPM1-204ENST00000334895 TIMP1P01033 207 aa23.38■■□□□ 1.33
TPM1-204ENST00000334895 TRIM49P0CI25 452 aa23.38■■□□□ 1.33
TPM1-204ENST00000334895 TRIM49CP0CI26 452 aa23.38■■□□□ 1.33
TPM1-204ENST00000334895 RTN4RL1Q86UN2 441 aaPredicted RBP23.38■■□□□ 1.33
TPM1-204ENST00000334895 DBF4BQ8NFT6 615 aa23.38■■□□□ 1.33
TPM1-204ENST00000334895 PARD3BQ8TEW8 1205 aa23.38■■□□□ 1.33
TPM1-204ENST00000334895 IPPQ9Y573 584 aa23.38■■□□□ 1.33
TPM1-204ENST00000334895 UTP18Q9Y5J1 556 aaKnown RBP eCLIP23.38■■□□□ 1.33
TPM1-204ENST00000334895 CLTAP09496 248 aa23.37■■□□□ 1.33
TPM1-204ENST00000334895 CXCL8P10145 99 aa23.37■■□□□ 1.33
TPM1-204ENST00000334895 VAMP7P51809 220 aa23.37■■□□□ 1.33
TPM1-204ENST00000334895 UBASH3AP57075 661 aa23.37■■□□□ 1.33
TPM1-204ENST00000334895 PSMD6Q15008 389 aa23.37■■□□□ 1.33
TPM1-204ENST00000334895 VWA3BQ502W6 1294 aa23.37■■□□□ 1.33
TPM1-204ENST00000334895 DCAF17Q5H9S7 520 aaPredicted RBP23.37■■□□□ 1.33
TPM1-204ENST00000334895 APBB1IPQ7Z5R6 666 aaPredicted RBP23.37■■□□□ 1.33
TPM1-204ENST00000334895 CCDC127Q96BQ5 260 aa23.37■■□□□ 1.33
TPM1-204ENST00000334895 ADAM2Q99965 735 aa23.37■■□□□ 1.33
TPM1-204ENST00000334895 TRAIPQ9BWF2 469 aa23.37■■□□□ 1.33
TPM1-204ENST00000334895 TRIM5Q9C035 493 aa23.37■■□□□ 1.33
TPM1-204ENST00000334895 PDE11AQ9HCR9 933 aa23.37■■□□□ 1.33
TPM1-204ENST00000334895 RTN4Q9NQC3 1192 aaKnown RBP23.37■■□□□ 1.33
TPM1-204ENST00000334895 FAM105AQ9NUU6 356 aa23.37■■□□□ 1.33
TPM1-204ENST00000334895 SNTG2Q9NY99 539 aa23.37■■□□□ 1.33
TPM1-204ENST00000334895 PCDHB2Q9Y5E7 798 aa23.37■■□□□ 1.33
TPM1-204ENST00000334895 LRRIQ3A6PVS8 624 aaPredicted RBP23.37■■□□□ 1.33
TPM1-204ENST00000334895 TEX33O43247 280 aa23.37■■□□□ 1.33
TPM1-204ENST00000334895 PARNO95453 639 aaKnown RBP23.37■■□□□ 1.33
TPM1-204ENST00000334895 KRT13P13646 458 aa23.37■■□□□ 1.33
TPM1-204ENST00000334895 ZSCAN20P17040 1043 aaPredicted RBP23.37■■□□□ 1.33
TPM1-204ENST00000334895 SYN1P17600 705 aa23.37■■□□□ 1.33
TPM1-204ENST00000334895 ZNF75DP51815 510 aa23.37■■□□□ 1.33
TPM1-204ENST00000334895 NR1I3Q14994 352 aa23.37■■□□□ 1.33
TPM1-204ENST00000334895 TMC2Q8TDI7 906 aa23.37■■□□□ 1.33
TPM1-204ENST00000334895 FAM84AQ96KN4 292 aa23.37■■□□□ 1.33
TPM1-204ENST00000334895 POP1Q99575 1024 aaKnown RBP23.37■■□□□ 1.33
TPM1-204ENST00000334895 TRIM6Q9C030 488 aaPredicted RBP23.37■■□□□ 1.33
TPM1-204ENST00000334895 RNF39Q9H2S5 420 aa23.37■■□□□ 1.33
TPM1-204ENST00000334895 NDST4Q9H3R1 872 aa23.37■■□□□ 1.33
TPM1-204ENST00000334895 CITO14578 2027 aa23.36■■□□□ 1.33
TPM1-204ENST00000334895 PTPRJQ12913 1337 aa23.36■■□□□ 1.33
TPM1-204ENST00000334895 RALGAPA2Q2PPJ7 1873 aa23.36■■□□□ 1.33
TPM1-204ENST00000334895 LGALS16A8MUM7 142 aa23.36■■□□□ 1.33
TPM1-204ENST00000334895 KCNH2Q12809 1159 aa23.36■■□□□ 1.33
TPM1-204ENST00000334895 HSP90AA2PQ14568 343 aaPredicted RBP23.36■■□□□ 1.33
TPM1-204ENST00000334895 KYAT1Q16773 422 aa23.36■■□□□ 1.33
TPM1-204ENST00000334895 PTPN21Q16825 1174 aa23.36■■□□□ 1.33
TPM1-204ENST00000334895 SLC10A6Q3KNW5 377 aa23.36■■□□□ 1.33
TPM1-204ENST00000334895 TCERG1LQ5VWI1 586 aa23.36■■□□□ 1.33
TPM1-204ENST00000334895 CXCL16Q9H2A7 254 aa23.36■■□□□ 1.33
TPM1-204ENST00000334895 RPF1Q9H9Y2 349 aaKnown RBP23.36■■□□□ 1.33
TPM1-204ENST00000334895 TOPORSQ9NS56 1045 aaPredicted RBP23.36■■□□□ 1.33
TPM1-204ENST00000334895 ZMYND8Q9ULU4 1186 aaPredicted RBP23.36■■□□□ 1.33
TPM1-204ENST00000334895 CLDN10P78369 228 aa23.35■■□□□ 1.33
TPM1-204ENST00000334895 ENPEPQ07075 957 aa23.35■■□□□ 1.33
TPM1-204ENST00000334895 PPP3CAQ08209 521 aa23.35■■□□□ 1.33
TPM1-204ENST00000334895 DEFB128Q7Z7B8 93 aa23.35■■□□□ 1.33
Retrieved 100 of 20,778 RNA–protein pairs in 16.4 ms