RNA–Protein interactions for RNA: ENST00000334557.10

FMR1-202, Transcript of fragile X mental retardation 1, humanhuman

TSL 1 (best) BASIC

Gene FMR1, Length 1,295 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
FMR1-202ENST00000334557 NEK8Q86SG6 692 aa22.29■■□□□ 1.16
FMR1-202ENST00000334557 POTEDQ86YR6 584 aa22.29■■□□□ 1.16
FMR1-202ENST00000334557 TPH2Q8IWU9 490 aa22.29■■□□□ 1.16
FMR1-202ENST00000334557 GPR65Q8IYL9 337 aa22.29■■□□□ 1.16
FMR1-202ENST00000334557 ITFG1Q8TB96 612 aa22.29■■□□□ 1.16
FMR1-202ENST00000334557 FGF13Q92913 245 aa22.29■■□□□ 1.16
FMR1-202ENST00000334557 DDX23Q9BUQ8 820 aaKnown RBP22.29■■□□□ 1.16
FMR1-202ENST00000334557 TRIM6Q9C030 488 aaPredicted RBP22.29■■□□□ 1.16
FMR1-202ENST00000334557 ZSWIM4Q9H7M6 989 aa22.29■■□□□ 1.16
FMR1-202ENST00000334557 FBXW11Q9UKB1 542 aa22.29■■□□□ 1.16
FMR1-202ENST00000334557 CDH7Q9ULB5 785 aa22.29■■□□□ 1.16
FMR1-202ENST00000334557 MYH15Q9Y2K3 1946 aa22.28■■□□□ 1.16
FMR1-202ENST00000334557 KANSL1LA0AUZ9 987 aa22.28■■□□□ 1.16
FMR1-202ENST00000334557 CCNT1O60563 726 aaKnown RBP22.28■■□□□ 1.16
FMR1-202ENST00000334557 TADA2AO75478 443 aa22.28■■□□□ 1.16
FMR1-202ENST00000334557 ARL2P36404 184 aa22.28■■□□□ 1.16
FMR1-202ENST00000334557 MXD4Q14582 209 aaPredicted RBP22.28■■□□□ 1.16
FMR1-202ENST00000334557 SLC44A4Q53GD3 710 aa22.28■■□□□ 1.16
FMR1-202ENST00000334557 RUFY3Q7L099 469 aa22.28■■□□□ 1.16
FMR1-202ENST00000334557 PHF20Q9BVI0 1012 aa22.28■■□□□ 1.16
FMR1-202ENST00000334557 SPATA6Q9NWH7 488 aaPredicted RBP22.28■■□□□ 1.16
FMR1-202ENST00000334557 PARP2Q9UGN5 583 aa22.28■■□□□ 1.16
FMR1-202ENST00000334557 ARID2Q68CP9 1835 aa22.28■■□□□ 1.16
FMR1-202ENST00000334557 GPR179Q6PRD1 2367 aa22.27■■□□□ 1.16
FMR1-202ENST00000334557 FAM205CA6NFA0 338 aa22.27■■□□□ 1.16
FMR1-202ENST00000334557 CPLX1O14810 134 aa22.27■■□□□ 1.16
FMR1-202ENST00000334557 CCL16O15467 120 aa22.27■■□□□ 1.16
FMR1-202ENST00000334557 GLRA2P23416 452 aa22.27■■□□□ 1.16
FMR1-202ENST00000334557 IGFBP6P24592 240 aaPredicted RBP22.27■■□□□ 1.16
FMR1-202ENST00000334557 PSMA5P28066 241 aa22.27■■□□□ 1.16
FMR1-202ENST00000334557 NCBP1Q09161 790 aaKnown RBP22.27■■□□□ 1.16
FMR1-202ENST00000334557 GRIK3Q13003 919 aa22.27■■□□□ 1.16
FMR1-202ENST00000334557 HSP90AA2PQ14568 343 aaPredicted RBP22.27■■□□□ 1.16
FMR1-202ENST00000334557 PCBP1Q15365 356 aaKnown RBP eCLIP22.27■■□□□ 1.16
FMR1-202ENST00000334557 LNX1Q8TBB1 728 aaPredicted RBP22.27■■□□□ 1.16
FMR1-202ENST00000334557 SHDQ96IW2 340 aa22.27■■□□□ 1.16
FMR1-202ENST00000334557 HCFC1R1Q9NWW0 138 aa22.27■■□□□ 1.16
FMR1-202ENST00000334557 ZFP37Q9Y6Q3 630 aaPredicted RBP22.27■■□□□ 1.16
FMR1-202ENST00000334557 NCOR2Q9Y618 2525 aa22.27■■□□□ 1.16
FMR1-202ENST00000334557 CEP250Q9BV73 2442 aa22.26■■□□□ 1.15
FMR1-202ENST00000334557 A0A1B0GUA9 196 aa22.26■■□□□ 1.15
FMR1-202ENST00000334557 CCDC194A0A1B0GVG4 234 aa22.26■■□□□ 1.15
FMR1-202ENST00000334557 CASTOR2A6NHX0 329 aa22.26■■□□□ 1.15
FMR1-202ENST00000334557 FAM170BA6NMN3 283 aa22.26■■□□□ 1.15
FMR1-202ENST00000334557 KINO60870 393 aaKnown RBP22.26■■□□□ 1.15
FMR1-202ENST00000334557 POU5F1BQ06416 359 aa22.26■■□□□ 1.15
FMR1-202ENST00000334557 UBXN2BQ14CS0 331 aa22.26■■□□□ 1.15
FMR1-202ENST00000334557 MLF2Q15773 248 aaPredicted RBP22.26■■□□□ 1.15
FMR1-202ENST00000334557 FAM171A1Q5VUB5 890 aa22.26■■□□□ 1.15
FMR1-202ENST00000334557 POTEHQ6S545 545 aa22.26■■□□□ 1.15
FMR1-202ENST00000334557 PIK3AP1Q6ZUJ8 805 aa22.26■■□□□ 1.15
FMR1-202ENST00000334557 CEP57Q86XR8 500 aa22.26■■□□□ 1.15
FMR1-202ENST00000334557 KXD1Q9BQD3 176 aa22.26■■□□□ 1.15
FMR1-202ENST00000334557 ZSWIM6Q9HCJ5 1215 aa22.26■■□□□ 1.15
FMR1-202ENST00000334557 POLIQ9UNA4 740 aa22.26■■□□□ 1.15
FMR1-202ENST00000334557 TTLL13PA6NNM8 815 aa22.25■■□□□ 1.15
FMR1-202ENST00000334557 TBX3O15119 743 aa22.25■■□□□ 1.15
FMR1-202ENST00000334557 MARCH6O60337 910 aa22.25■■□□□ 1.15
FMR1-202ENST00000334557 KRT37O76014 449 aa22.25■■□□□ 1.15
FMR1-202ENST00000334557 KIF4AO95239 1232 aa22.25■■□□□ 1.15
FMR1-202ENST00000334557 C8AP07357 584 aa22.25■■□□□ 1.15
FMR1-202ENST00000334557 CSTF1Q05048 431 aaKnown RBP22.25■■□□□ 1.15
FMR1-202ENST00000334557 TFDP1Q14186 410 aa22.25■■□□□ 1.15
FMR1-202ENST00000334557 PPM1LQ5SGD2 360 aa22.25■■□□□ 1.15
FMR1-202ENST00000334557 VARS2Q5ST30 1063 aaKnown RBP22.25■■□□□ 1.15
FMR1-202ENST00000334557 SLC27A1Q6PCB7 646 aa22.25■■□□□ 1.15
FMR1-202ENST00000334557 ZNF274Q96GC6 653 aaPredicted RBP22.25■■□□□ 1.15
FMR1-202ENST00000334557 CNTNAP3BQ96NU0 1288 aa22.25■■□□□ 1.15
FMR1-202ENST00000334557 CNTNAP3Q9BZ76 1288 aa22.25■■□□□ 1.15
FMR1-202ENST00000334557 PTGESO14684 152 aa22.24■■□□□ 1.15
FMR1-202ENST00000334557 LAMTOR5O43504 91 aa22.24■■□□□ 1.15
FMR1-202ENST00000334557 GCFC2P16383 781 aaKnown RBP22.24■■□□□ 1.15
FMR1-202ENST00000334557 PSMD5Q16401 504 aa22.24■■□□□ 1.15
FMR1-202ENST00000334557 TSSK4Q6SA08 328 aa22.24■■□□□ 1.15
FMR1-202ENST00000334557 HACE1Q8IYU2 909 aa22.24■■□□□ 1.15
FMR1-202ENST00000334557 PIK3R5Q8WYR1 880 aa22.24■■□□□ 1.15
FMR1-202ENST00000334557 HSD17B14Q9BPX1 270 aa22.24■■□□□ 1.15
FMR1-202ENST00000334557 EIF2AK1Q9BQI3 630 aaKnown RBP22.24■■□□□ 1.15
FMR1-202ENST00000334557 TTPALQ9BTX7 342 aa22.24■■□□□ 1.15
FMR1-202ENST00000334557 BCO2Q9BYV7 579 aa22.24■■□□□ 1.15
FMR1-202ENST00000334557 USP20Q9Y2K6 914 aa22.24■■□□□ 1.15
FMR1-202ENST00000334557 SF3B1O75533 1304 aaKnown RBP eCLIP22.24■■□□□ 1.155e-10■■■■■ 55.1
FMR1-202ENST00000334557 HNRNPA1P09651 372 aaKnown RBP eCLIP22.23■■□□□ 1.15
FMR1-202ENST00000334557 CREMQ03060 361 aa22.23■■□□□ 1.15
FMR1-202ENST00000334557 TUSC3Q13454 348 aa22.23■■□□□ 1.15
FMR1-202ENST00000334557 ZNF528Q3MIS6 628 aa22.23■■□□□ 1.15
FMR1-202ENST00000334557 LIN9Q5TKA1 542 aa22.23■■□□□ 1.15
FMR1-202ENST00000334557 PIGOQ8TEQ8 1089 aa22.23■■□□□ 1.15
FMR1-202ENST00000334557 NFKBIZQ9BYH8 718 aa22.23■■□□□ 1.15
FMR1-202ENST00000334557 PLA2G2FQ9BZM2 168 aa22.23■■□□□ 1.15
FMR1-202ENST00000334557 LTB4R2Q9NPC1 389 aa22.23■■□□□ 1.15
FMR1-202ENST00000334557 GPRC5CQ9NQ84 441 aa22.23■■□□□ 1.15
FMR1-202ENST00000334557 DNMT3BQ9UBC3 853 aaKnown RBP22.23■■□□□ 1.15
FMR1-202ENST00000334557 FBXO4Q9UKT5 387 aa22.23■■□□□ 1.15
FMR1-202ENST00000334557 MIA3Q5JRA6 1907 aa22.23■■□□□ 1.15
FMR1-202ENST00000334557 SHISA7A6NL88 538 aa22.22■■□□□ 1.15
FMR1-202ENST00000334557 PRKCQQ04759 706 aa22.22■■□□□ 1.15
FMR1-202ENST00000334557 NAB2Q15742 525 aa22.22■■□□□ 1.15
FMR1-202ENST00000334557 MAEAQ7L5Y9 396 aa22.22■■□□□ 1.15
FMR1-202ENST00000334557 FAM177A1Q8N128 213 aaPredicted RBP22.22■■□□□ 1.15
Retrieved 100 of 20,778 RNA–protein pairs in 21.2 ms