RNA–Protein interactions for RNA: ENST00000334504.11

COL4A6-201, Transcript of collagen type IV alpha 6 chain, humanhuman

APPRIS P1 TSL 5 BASIC

Gene COL4A6, Length 6,700 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL4A6-201ENST00000334504 POLE3Q9NRF9 147 aa10.34□□□□□ -0.75
COL4A6-201ENST00000334504 DDX56Q9NY93 547 aaKnown RBP10.34□□□□□ -0.75
COL4A6-201ENST00000334504 USE1Q9NZ43 259 aa10.34□□□□□ -0.75
COL4A6-201ENST00000334504 SMARCAL1Q9NZC9 954 aa10.34□□□□□ -0.75
COL4A6-201ENST00000334504 ZSWIM5Q9P217 1185 aa10.34□□□□□ -0.75
COL4A6-201ENST00000334504 MYO1DO94832 1006 aa10.34□□□□□ -0.75
COL4A6-201ENST00000334504 IMPDH2P12268 514 aa10.34□□□□□ -0.75
COL4A6-201ENST00000334504 CHRNDQ07001 517 aa10.34□□□□□ -0.75
COL4A6-201ENST00000334504 AARS2Q5JTZ9 985 aaKnown RBP10.34□□□□□ -0.75
COL4A6-201ENST00000334504 GPATCH4Q5T3I0 446 aaKnown RBP10.34□□□□□ -0.75
COL4A6-201ENST00000334504 CCDC60Q8IWA6 550 aaPredicted RBP10.34□□□□□ -0.75
COL4A6-201ENST00000334504 RHOT1Q8IXI2 618 aa10.34□□□□□ -0.75
COL4A6-201ENST00000334504 SYNDIG1Q9H7V2 258 aa10.34□□□□□ -0.75
COL4A6-201ENST00000334504 TMEM191CA6NGB0 347 aa10.34□□□□□ -0.75
COL4A6-201ENST00000334504 PHF2O75151 1096 aa10.34□□□□□ -0.75
COL4A6-201ENST00000334504 ADD2P35612 726 aa10.34□□□□□ -0.75
COL4A6-201ENST00000334504 SLC9A5Q14940 896 aa10.34□□□□□ -0.75
COL4A6-201ENST00000334504 SURF1Q15526 300 aa10.34□□□□□ -0.75
COL4A6-201ENST00000334504 CC2D2BQ6DHV5 1058 aa10.34□□□□□ -0.75
COL4A6-201ENST00000334504 TMEM270Q6UE05 265 aa10.34□□□□□ -0.75
COL4A6-201ENST00000334504 TMEM35BQ8NCS4 154 aa10.34□□□□□ -0.75
COL4A6-201ENST00000334504 MDM1Q8TC05 714 aa10.34□□□□□ -0.75
COL4A6-201ENST00000334504 MMTAG2Q9BU76 263 aaKnown RBP10.34□□□□□ -0.75
COL4A6-201ENST00000334504 PUS7LQ9H0K6 701 aaKnown RBP10.34□□□□□ -0.75
COL4A6-201ENST00000334504 ZSCAN32Q9NX65 697 aa10.34□□□□□ -0.75
COL4A6-201ENST00000334504 AP4S1Q9Y587 144 aa10.34□□□□□ -0.75
COL4A6-201ENST00000334504 V9GYQ6 96 aa10.34□□□□□ -0.75
COL4A6-201ENST00000334504 TOB2Q14106 344 aaPredicted RBP10.34□□□□□ -0.75
COL4A6-201ENST00000334504 NECTIN1Q15223 517 aa10.34□□□□□ -0.75
COL4A6-201ENST00000334504 P3H1Q32P28 736 aa10.34□□□□□ -0.75
COL4A6-201ENST00000334504 FAM180AQ6UWF9 173 aa10.34□□□□□ -0.75
COL4A6-201ENST00000334504 CCDC149Q6ZUS6 474 aa10.34□□□□□ -0.75
COL4A6-201ENST00000334504 PODNQ7Z5L7 613 aa10.34□□□□□ -0.75
COL4A6-201ENST00000334504 ZNF579Q8NAF0 562 aaKnown RBP10.34□□□□□ -0.75
COL4A6-201ENST00000334504 BHMT2Q9H2M3 363 aa10.34□□□□□ -0.75
COL4A6-201ENST00000334504 PSMC3IPQ9P2W1 217 aaPredicted RBP10.34□□□□□ -0.75
COL4A6-201ENST00000334504 TRIM10Q9UDY6 481 aa10.34□□□□□ -0.75
COL4A6-201ENST00000334504 SOX13Q9UN79 622 aa10.34□□□□□ -0.75
COL4A6-201ENST00000334504 CAND2O75155 1236 aa10.34□□□□□ -0.75
COL4A6-201ENST00000334504 USP1O94782 785 aa10.34□□□□□ -0.75
COL4A6-201ENST00000334504 PLEKHA8P1O95397 391 aa10.34□□□□□ -0.75
COL4A6-201ENST00000334504 TTLL1O95922 423 aa10.34□□□□□ -0.75
COL4A6-201ENST00000334504 PEX3P56589 373 aa10.34□□□□□ -0.75
COL4A6-201ENST00000334504 COASYQ13057 564 aa10.34□□□□□ -0.75
COL4A6-201ENST00000334504 PLEKHA7Q6IQ23 1121 aa10.34□□□□□ -0.75
COL4A6-201ENST00000334504 ARMCX2Q7L311 632 aa10.34□□□□□ -0.75
COL4A6-201ENST00000334504 CDKL3Q8IVW4 592 aaPredicted RBP10.34□□□□□ -0.75
COL4A6-201ENST00000334504 RAD54LQ92698 747 aa10.34□□□□□ -0.75
COL4A6-201ENST00000334504 ZCWPW1Q9H0M4 648 aa10.34□□□□□ -0.75
COL4A6-201ENST00000334504 ZNF556Q9HAH1 456 aa10.34□□□□□ -0.75
COL4A6-201ENST00000334504 AFF4Q9UHB7 1163 aaKnown RBP10.34□□□□□ -0.75
COL4A6-201ENST00000334504 CDYLQ9Y232 598 aa10.34□□□□□ -0.75
COL4A6-201ENST00000334504 CTTNBP2Q8WZ74 1663 aa10.34□□□□□ -0.75
COL4A6-201ENST00000334504 ARHGEF10O15013 1369 aa10.34□□□□□ -0.75
COL4A6-201ENST00000334504 E7ENQ6 273 aa10.33□□□□□ -0.76
COL4A6-201ENST00000334504 HNRNPRO43390 633 aaKnown RBP10.33□□□□□ -0.76
COL4A6-201ENST00000334504 RHOBTB1O94844 696 aa10.33□□□□□ -0.76
COL4A6-201ENST00000334504 FAM200BP0CF97 657 aa10.33□□□□□ -0.76
COL4A6-201ENST00000334504 MYBL1P10243 752 aa10.33□□□□□ -0.76
COL4A6-201ENST00000334504 SCTRP47872 440 aa10.33□□□□□ -0.76
COL4A6-201ENST00000334504 RPS8P62241 208 aaKnown RBP10.33□□□□□ -0.76
COL4A6-201ENST00000334504 ATP1A4Q13733 1029 aa10.33□□□□□ -0.76
COL4A6-201ENST00000334504 KIAA0825Q8IV33 1275 aa10.33□□□□□ -0.76
COL4A6-201ENST00000334504 OR6B3Q8NGW1 331 aa10.33□□□□□ -0.76
COL4A6-201ENST00000334504 GLMNQ92990 594 aa10.33□□□□□ -0.76
COL4A6-201ENST00000334504 RBM12Q9NTZ6 932 aaKnown RBP10.33□□□□□ -0.76
COL4A6-201ENST00000334504 NDUFA13Q9P0J0 144 aa10.33□□□□□ -0.76
COL4A6-201ENST00000334504 KCNA6P17658 529 aa10.33□□□□□ -0.76
COL4A6-201ENST00000334504 PDAP1Q13442 181 aaKnown RBP10.33□□□□□ -0.76
COL4A6-201ENST00000334504 LCORLQ8N3X6 602 aa10.33□□□□□ -0.76
COL4A6-201ENST00000334504 RFFLQ8WZ73 363 aa10.33□□□□□ -0.76
COL4A6-201ENST00000334504 MPP4Q96JB8 637 aa10.33□□□□□ -0.76
COL4A6-201ENST00000334504 CNDP1Q96KN2 507 aa10.33□□□□□ -0.76
COL4A6-201ENST00000334504 PCMTD2Q9NV79 361 aa10.33□□□□□ -0.76
COL4A6-201ENST00000334504 HSPBP1Q9NZL4 362 aa10.33□□□□□ -0.76
COL4A6-201ENST00000334504 UBA6A0AVT1 1052 aaPredicted RBP10.33□□□□□ -0.76
COL4A6-201ENST00000334504 ZNF189O75820 626 aaPredicted RBP10.33□□□□□ -0.76
COL4A6-201ENST00000334504 CAPN1P07384 714 aa10.33□□□□□ -0.76
COL4A6-201ENST00000334504 ARHGAP17Q68EM7 881 aa10.33□□□□□ -0.76
COL4A6-201ENST00000334504 USP17L2Q6R6M4 530 aa10.33□□□□□ -0.76
COL4A6-201ENST00000334504 LRRC34Q8IZ02 419 aa10.33□□□□□ -0.76
COL4A6-201ENST00000334504 ABI1Q8IZP0 508 aa10.33□□□□□ -0.76
COL4A6-201ENST00000334504 DGCR8Q8WYQ5 773 aaKnown RBP eCLIP10.33□□□□□ -0.76
COL4A6-201ENST00000334504 OTUB1Q96FW1 271 aaPredicted RBP10.33□□□□□ -0.76
COL4A6-201ENST00000334504 TMEM51Q9NW97 253 aa10.33□□□□□ -0.76
COL4A6-201ENST00000334504 DAPK2Q9UIK4 370 aa10.33□□□□□ -0.76
COL4A6-201ENST00000334504 ZMYND8Q9ULU4 1186 aaPredicted RBP10.33□□□□□ -0.76
COL4A6-201ENST00000334504 EDC4Q6P2E9 1401 aaKnown RBP10.33□□□□□ -0.76
COL4A6-201ENST00000334504 IQCA1LA6NCM1 817 aa10.33□□□□□ -0.76
COL4A6-201ENST00000334504 SSTR3P32745 418 aaPredicted RBP10.33□□□□□ -0.76
COL4A6-201ENST00000334504 RIN3Q8TB24 985 aa10.33□□□□□ -0.76
COL4A6-201ENST00000334504 MAGEB5Q9BZ81 275 aa10.33□□□□□ -0.76
COL4A6-201ENST00000334504 IL1RL2Q9HB29 575 aa10.33□□□□□ -0.76
COL4A6-201ENST00000334504 SLC9A2Q9UBY0 812 aa10.33□□□□□ -0.76
COL4A6-201ENST00000334504 DUOX2Q9NRD8 1548 aa10.33□□□□□ -0.76
COL4A6-201ENST00000334504 ALBP02768 609 aa10.33□□□□□ -0.76
COL4A6-201ENST00000334504 CCND2P30279 289 aa10.33□□□□□ -0.76
COL4A6-201ENST00000334504 KRR1Q13601 381 aaKnown RBP10.33□□□□□ -0.76
COL4A6-201ENST00000334504 SYDE1Q6ZW31 735 aaPredicted RBP10.33□□□□□ -0.76
COL4A6-201ENST00000334504 GLYCTKQ8IVS8 523 aa10.33□□□□□ -0.76
Retrieved 100 of 20,778 RNA–protein pairs in 45.4 ms