RNA–Protein interactions for RNA: ENST00000333254.3

CCDC172-201, Transcript of coiled-coil domain containing 172, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CCDC172, Length 1,699 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC172-201ENST00000333254 MICALCLQ6ZW33 695 aa11.55□□□□□ -0.56
CCDC172-201ENST00000333254 CYFIP1Q7L576 1253 aa11.55□□□□□ -0.56
CCDC172-201ENST00000333254 ARMC9Q7Z3E5 817 aa11.55□□□□□ -0.56
CCDC172-201ENST00000333254 DDX42Q86XP3 938 aaKnown RBP eCLIP11.55□□□□□ -0.56
CCDC172-201ENST00000333254 CBWD2Q8IUF1 395 aa11.55□□□□□ -0.56
CCDC172-201ENST00000333254 PRELID2Q8N945 189 aa11.55□□□□□ -0.56
CCDC172-201ENST00000333254 ZNF564Q8TBZ8 553 aaPredicted RBP11.55□□□□□ -0.56
CCDC172-201ENST00000333254 MAIP1Q8WWC4 291 aa11.55□□□□□ -0.56
CCDC172-201ENST00000333254 DDX1Q92499 740 aaKnown RBP11.55□□□□□ -0.56
CCDC172-201ENST00000333254 CENPTQ96BT3 561 aa11.55□□□□□ -0.56
CCDC172-201ENST00000333254 TLCD1Q96CP7 247 aa11.55□□□□□ -0.56
CCDC172-201ENST00000333254 ERVK-5Q9HDB9 667 aa11.55□□□□□ -0.56
CCDC172-201ENST00000333254 RAB20Q9NX57 234 aa11.55□□□□□ -0.56
CCDC172-201ENST00000333254 MTUS1Q9ULD2 1270 aa11.55□□□□□ -0.56
CCDC172-201ENST00000333254 TRPC6Q9Y210 931 aa11.55□□□□□ -0.56
CCDC172-201ENST00000333254 STYXL1Q9Y6J8 313 aa11.55□□□□□ -0.56
CCDC172-201ENST00000333254 LRRC37A2A6NM11 1700 aa11.55□□□□□ -0.56
CCDC172-201ENST00000333254 LTBP3Q9NS15 1303 aa11.54□□□□□ -0.56
CCDC172-201ENST00000333254 C19orf81C9J6K1 198 aa11.54□□□□□ -0.56
CCDC172-201ENST00000333254 NDUFAB1O14561 156 aa11.54□□□□□ -0.56
CCDC172-201ENST00000333254 FAM107AO95990 144 aa11.54□□□□□ -0.56
CCDC172-201ENST00000333254 MYCLP12524 364 aaPredicted RBP11.54□□□□□ -0.56
CCDC172-201ENST00000333254 MAN1A1P33908 653 aa11.54□□□□□ -0.56
CCDC172-201ENST00000333254 CDR1P51861 262 aa11.54□□□□□ -0.56
CCDC172-201ENST00000333254 BPIFB4P59827 614 aa11.54□□□□□ -0.56
CCDC172-201ENST00000333254 PPP2R2AP63151 447 aa11.54□□□□□ -0.56
CCDC172-201ENST00000333254 PTP4A2Q12974 167 aa11.54□□□□□ -0.56
CCDC172-201ENST00000333254 KCTD16Q68DU8 428 aa11.54□□□□□ -0.56
CCDC172-201ENST00000333254 ACAD10Q6JQN1 1059 aa11.54□□□□□ -0.56
CCDC172-201ENST00000333254 MAEAQ7L5Y9 396 aa11.54□□□□□ -0.56
CCDC172-201ENST00000333254 SLC13A5Q86YT5 568 aaPredicted RBP11.54□□□□□ -0.56
CCDC172-201ENST00000333254 SCYL3Q8IZE3 742 aa11.54□□□□□ -0.56
CCDC172-201ENST00000333254 PPM1KQ8N3J5 372 aa11.54□□□□□ -0.56
CCDC172-201ENST00000333254 NSUN6Q8TEA1 469 aaKnown RBP11.54□□□□□ -0.56
CCDC172-201ENST00000333254 JDP2Q8WYK2 163 aa11.54□□□□□ -0.56
CCDC172-201ENST00000333254 SEMA4DQ92854 862 aa11.54□□□□□ -0.56
CCDC172-201ENST00000333254 ZBTB9Q96C00 473 aa11.54□□□□□ -0.56
CCDC172-201ENST00000333254 PGM2Q96G03 612 aa11.54□□□□□ -0.56
CCDC172-201ENST00000333254 CELF4Q9BZC1 486 aaKnown RBP11.54□□□□□ -0.56
CCDC172-201ENST00000333254 TAOK3Q9H2K8 898 aa11.54□□□□□ -0.56
CCDC172-201ENST00000333254 PABPC3Q9H361 631 aaKnown RBP11.54□□□□□ -0.56
CCDC172-201ENST00000333254 LRRC19Q9H756 370 aa11.54□□□□□ -0.56
CCDC172-201ENST00000333254 GPRC5CQ9NQ84 441 aa11.54□□□□□ -0.56
CCDC172-201ENST00000333254 GRHL1Q9NZI5 618 aa11.54□□□□□ -0.56
CCDC172-201ENST00000333254 MTRF1LQ9UGC7 380 aaKnown RBP11.54□□□□□ -0.56
CCDC172-201ENST00000333254 NR2E1Q9Y466 385 aa11.54□□□□□ -0.56
CCDC172-201ENST00000333254 PAPPA2Q9BXP8 1791 aa11.54□□□□□ -0.56
CCDC172-201ENST00000333254 CCDC169A6NNP5 214 aa11.53□□□□□ -0.56
CCDC172-201ENST00000333254 CYP26A1O43174 497 aa11.53□□□□□ -0.56
CCDC172-201ENST00000333254 ZNF862O60290 1169 aa11.53□□□□□ -0.56
CCDC172-201ENST00000333254 GRIN3BO60391 1043 aa11.53□□□□□ -0.56
CCDC172-201ENST00000333254 COMTP21964 271 aa11.53□□□□□ -0.56
CCDC172-201ENST00000333254 SLC1A1P43005 524 aa11.53□□□□□ -0.56
CCDC172-201ENST00000333254 RWDD2BP57060 319 aa11.53□□□□□ -0.56
CCDC172-201ENST00000333254 MAP2K1Q02750 393 aaPredicted RBP11.53□□□□□ -0.56
CCDC172-201ENST00000333254 MTMR2Q13614 643 aa11.53□□□□□ -0.56
CCDC172-201ENST00000333254 CLEC16AQ2KHT3 1053 aa11.53□□□□□ -0.56
CCDC172-201ENST00000333254 NAA35Q5VZE5 725 aa11.53□□□□□ -0.56
CCDC172-201ENST00000333254 PLA2G4FQ68DD2 849 aa11.53□□□□□ -0.56
CCDC172-201ENST00000333254 ZDHHC24Q6UX98 284 aa11.53□□□□□ -0.56
CCDC172-201ENST00000333254 TRIM72Q6ZMU5 477 aa11.53□□□□□ -0.56
CCDC172-201ENST00000333254 SYDE1Q6ZW31 735 aaPredicted RBP11.53□□□□□ -0.56
CCDC172-201ENST00000333254 UBLCP1Q8WVY7 318 aaPredicted RBP11.53□□□□□ -0.56
CCDC172-201ENST00000333254 KAT5Q92993 513 aa11.53□□□□□ -0.56
CCDC172-201ENST00000333254 ATG4CQ96DT6 458 aa11.53□□□□□ -0.56
CCDC172-201ENST00000333254 IFT74Q96LB3 600 aa11.53□□□□□ -0.56
CCDC172-201ENST00000333254 TRIM51Q9BSJ1 452 aa11.53□□□□□ -0.56
CCDC172-201ENST00000333254 NUP85Q9BW27 656 aa11.53□□□□□ -0.56
CCDC172-201ENST00000333254 PLEKHA4Q9H4M7 779 aa11.53□□□□□ -0.56
CCDC172-201ENST00000333254 ATP6V0A4Q9HBG4 840 aa11.53□□□□□ -0.56
CCDC172-201ENST00000333254 PIM2Q9P1W9 311 aa11.53□□□□□ -0.56
CCDC172-201ENST00000333254 FAM169AQ9Y6X4 670 aa11.53□□□□□ -0.56
CCDC172-201ENST00000333254 TESPA1A2RU30 521 aaPredicted RBP11.52□□□□□ -0.56
CCDC172-201ENST00000333254 C5orf60A6NFR6 353 aa11.52□□□□□ -0.56
CCDC172-201ENST00000333254 SPATA31C2B4DYI2 1134 aa11.52□□□□□ -0.56
CCDC172-201ENST00000333254 FSCN2O14926 492 aa11.52□□□□□ -0.56
CCDC172-201ENST00000333254 EXTL3O43909 919 aa11.52□□□□□ -0.56
CCDC172-201ENST00000333254 MMEP08473 750 aa11.52□□□□□ -0.56
CCDC172-201ENST00000333254 ICAM3P32942 547 aa11.52□□□□□ -0.56
CCDC172-201ENST00000333254 FLT3P36888 993 aa11.52□□□□□ -0.56
CCDC172-201ENST00000333254 ATP1A2P50993 1020 aa11.52□□□□□ -0.56
CCDC172-201ENST00000333254 EN1Q05925 392 aaPredicted RBP11.52□□□□□ -0.56
CCDC172-201ENST00000333254 BYSLQ13895 437 aaKnown RBP11.52□□□□□ -0.56
CCDC172-201ENST00000333254 BAATQ14032 418 aaPredicted RBP11.52□□□□□ -0.56
CCDC172-201ENST00000333254 SLMAPQ14BN4 828 aa11.52□□□□□ -0.56
CCDC172-201ENST00000333254 PSMD6Q15008 389 aa11.52□□□□□ -0.56
CCDC172-201ENST00000333254 SIX1Q15475 284 aaPredicted RBP11.52□□□□□ -0.56
CCDC172-201ENST00000333254 PTPROQ16827 1216 aa11.52□□□□□ -0.56
CCDC172-201ENST00000333254 GNPTABQ3T906 1256 aa11.52□□□□□ -0.56
CCDC172-201ENST00000333254 XKR3Q5GH77 459 aa11.52□□□□□ -0.56
CCDC172-201ENST00000333254 SAMD1Q6SPF0 538 aaPredicted RBP11.52□□□□□ -0.56
CCDC172-201ENST00000333254 ABHD15Q6UXT9 468 aa11.52□□□□□ -0.56
CCDC172-201ENST00000333254 NSMFQ6X4W1 530 aa11.52□□□□□ -0.56
CCDC172-201ENST00000333254 SV2AQ7L0J3 742 aa11.52□□□□□ -0.56
CCDC172-201ENST00000333254 TADA2BQ86TJ2 420 aa11.52□□□□□ -0.56
CCDC172-201ENST00000333254 SLC47A2Q86VL8 602 aa11.52□□□□□ -0.56
CCDC172-201ENST00000333254 C10orf67Q8IYJ2 551 aa11.52□□□□□ -0.56
CCDC172-201ENST00000333254 ZNF280CQ8ND82 737 aa11.52□□□□□ -0.56
CCDC172-201ENST00000333254 ZSWIM2Q8NEG5 633 aa11.52□□□□□ -0.56
CCDC172-201ENST00000333254 MYCBPAPQ8TBZ2 947 aa11.52□□□□□ -0.56
Retrieved 100 of 20,778 RNA–protein pairs in 58.9 ms