RNA–Protein interactions for RNA: ENST00000333090.4

TSKU-201, Transcript of tsukushi, small leucine rich proteoglycan, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene TSKU, Length 2,712 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TSKU-201ENST00000333090 O00370 1275 aa25.28■■□□□ 1.64
TSKU-201ENST00000333090 POLRMTO00411 1230 aaKnown RBP25.28■■□□□ 1.64
TSKU-201ENST00000333090 CHRNB2P17787 502 aa25.28■■□□□ 1.64
TSKU-201ENST00000333090 UBXN2AP68543 259 aa25.28■■□□□ 1.64
TSKU-201ENST00000333090 SYDE2Q5VT97 1194 aa25.28■■□□□ 1.64
TSKU-201ENST00000333090 SIAH1Q8IUQ4 282 aa25.28■■□□□ 1.64
TSKU-201ENST00000333090 KCTD17Q8N5Z5 321 aa25.28■■□□□ 1.64
TSKU-201ENST00000333090 SLC24A3Q9HC58 644 aa25.28■■□□□ 1.64
TSKU-201ENST00000333090 WHRNQ9P202 907 aa25.28■■□□□ 1.64
TSKU-201ENST00000333090 BBOX1O75936 387 aa25.27■■□□□ 1.64
TSKU-201ENST00000333090 VAMP7P51809 220 aa25.27■■□□□ 1.64
TSKU-201ENST00000333090 SEPT14Q6ZU15 432 aa25.27■■□□□ 1.64
TSKU-201ENST00000333090 BZW1Q7L1Q6 419 aaKnown RBP25.27■■□□□ 1.64
TSKU-201ENST00000333090 C12orf50Q8NA57 414 aaPredicted RBP25.27■■□□□ 1.64
TSKU-201ENST00000333090 ATG4AQ8WYN0 398 aa25.27■■□□□ 1.64
TSKU-201ENST00000333090 K7ENM7 598 aa25.27■■□□□ 1.64
TSKU-201ENST00000333090 CYP26A1O43174 497 aa25.27■■□□□ 1.64
TSKU-201ENST00000333090 TTC4O95801 387 aa25.27■■□□□ 1.64
TSKU-201ENST00000333090 INTS8Q75QN2 995 aaKnown RBP25.27■■□□□ 1.64
TSKU-201ENST00000333090 SLC47A2Q86VL8 602 aa25.27■■□□□ 1.64
TSKU-201ENST00000333090 PPEF1O14829 653 aaPredicted RBP25.26■■□□□ 1.63
TSKU-201ENST00000333090 THAP12O43422 761 aa25.26■■□□□ 1.63
TSKU-201ENST00000333090 PSMD10O75832 226 aa25.26■■□□□ 1.63
TSKU-201ENST00000333090 MTA2O94776 668 aa25.26■■□□□ 1.63
TSKU-201ENST00000333090 CYP3A4P08684 503 aa25.26■■□□□ 1.63
TSKU-201ENST00000333090 TNIP1Q15025 636 aa25.26■■□□□ 1.63
TSKU-201ENST00000333090 APOBEC3HQ6NTF7 200 aaKnown RBP25.26■■□□□ 1.63
TSKU-201ENST00000333090 SLC9A9Q8IVB4 645 aa25.26■■□□□ 1.63
TSKU-201ENST00000333090 NACC1Q96RE7 527 aa25.26■■□□□ 1.63
TSKU-201ENST00000333090 PLCD4Q9BRC7 762 aa25.26■■□□□ 1.63
TSKU-201ENST00000333090 KLHL14Q9P2G3 628 aa25.26■■□□□ 1.63
TSKU-201ENST00000333090 NOCTQ9UK39 431 aaKnown RBP25.26■■□□□ 1.63
TSKU-201ENST00000333090 GAS7O60861 476 aa25.26■■□□□ 1.63
TSKU-201ENST00000333090 HIP1RO75146 1068 aa25.26■■□□□ 1.63
TSKU-201ENST00000333090 NDUFB10O96000 172 aa25.26■■□□□ 1.63
TSKU-201ENST00000333090 PPM1KQ8N3J5 372 aa25.26■■□□□ 1.63
TSKU-201ENST00000333090 BATF3Q9NR55 127 aa25.26■■□□□ 1.63
TSKU-201ENST00000333090 GREB1LQ9C091 1923 aaPredicted RBP25.25■■□□□ 1.63
TSKU-201ENST00000333090 GDF11O95390 407 aa25.25■■□□□ 1.63
TSKU-201ENST00000333090 CFBP00751 764 aa25.25■■□□□ 1.63
TSKU-201ENST00000333090 GZMAP12544 262 aa25.25■■□□□ 1.63
TSKU-201ENST00000333090 VPS41P49754 854 aa25.25■■□□□ 1.63
TSKU-201ENST00000333090 LACTBP83111 547 aaPredicted RBP25.25■■□□□ 1.63
TSKU-201ENST00000333090 CYP4X1Q8N118 509 aa25.25■■□□□ 1.63
TSKU-201ENST00000333090 PWWP2AQ96N64 755 aa25.25■■□□□ 1.63
TSKU-201ENST00000333090 CHST7Q9NS84 486 aa25.25■■□□□ 1.63
TSKU-201ENST00000333090 PRKAG3Q9UGI9 489 aa25.25■■□□□ 1.63
TSKU-201ENST00000333090 CCDC189A1A4V9 331 aa25.25■■□□□ 1.63
TSKU-201ENST00000333090 PRELPP51888 382 aa25.25■■□□□ 1.63
TSKU-201ENST00000333090 ITGA8P53708 1063 aa25.25■■□□□ 1.63
TSKU-201ENST00000333090 EPC2Q52LR7 807 aa25.25■■□□□ 1.63
TSKU-201ENST00000333090 RHBDF2Q6PJF5 856 aa25.25■■□□□ 1.63
TSKU-201ENST00000333090 ASRGL1Q7L266 308 aa25.25■■□□□ 1.63
TSKU-201ENST00000333090 SRRM1Q8IYB3 904 aaKnown RBP25.25■■□□□ 1.63
TSKU-201ENST00000333090 TEKT1Q969V4 418 aa25.25■■□□□ 1.63
TSKU-201ENST00000333090 CBWD1Q9BRT8 395 aa25.25■■□□□ 1.63
TSKU-201ENST00000333090 SUGT1Q9Y2Z0 365 aa25.25■■□□□ 1.63
TSKU-201ENST00000333090 ITIH2P19823 946 aa25.24■■□□□ 1.63
TSKU-201ENST00000333090 ATP11AP98196 1134 aa25.24■■□□□ 1.63
TSKU-201ENST00000333090 MGAT5Q09328 741 aa25.24■■□□□ 1.63
TSKU-201ENST00000333090 CGB2Q6NT52 195 aa25.24■■□□□ 1.63
TSKU-201ENST00000333090 SNF8Q96H20 258 aa25.24■■□□□ 1.63
TSKU-201ENST00000333090 ARHGEF35A5YM69 484 aa25.24■■□□□ 1.63
TSKU-201ENST00000333090 PPP2R5CQ13362 524 aa25.24■■□□□ 1.63
TSKU-201ENST00000333090 ZSWIM2Q8NEG5 633 aa25.24■■□□□ 1.63
TSKU-201ENST00000333090 COA1Q9GZY4 146 aa25.24■■□□□ 1.63
TSKU-201ENST00000333090 DBNDD1Q9H9R9 158 aa25.24■■□□□ 1.63
TSKU-201ENST00000333090 ADAM22Q9P0K1 906 aa25.24■■□□□ 1.63
TSKU-201ENST00000333090 MYH11P35749 1972 aa25.24■■□□□ 1.63
TSKU-201ENST00000333090 DDTLA6NHG4 134 aaPredicted RBP25.23■■□□□ 1.63
TSKU-201ENST00000333090 RASA3Q14644 834 aa25.23■■□□□ 1.63
TSKU-201ENST00000333090 NKIRAS1Q9NYS0 192 aa25.23■■□□□ 1.63
TSKU-201ENST00000333090 FMO1Q01740 532 aa25.23■■□□□ 1.63
TSKU-201ENST00000333090 FAM47EQ6ZV65 393 aa25.23■■□□□ 1.63
TSKU-201ENST00000333090 DAW1Q8N136 415 aa25.23■■□□□ 1.63
TSKU-201ENST00000333090 PSPC1Q8WXF1 523 aaKnown RBP25.23■■□□□ 1.63
TSKU-201ENST00000333090 VTI1AQ96AJ9 217 aa25.23■■□□□ 1.63
TSKU-201ENST00000333090 TRIM7Q9C029 511 aa25.23■■□□□ 1.63
TSKU-201ENST00000333090 ETNK1Q9HBU6 452 aa25.23■■□□□ 1.63
TSKU-201ENST00000333090 GTF3C4Q9UKN8 822 aa25.23■■□□□ 1.63
TSKU-201ENST00000333090 CYP1A2P05177 515 aa25.22■■□□□ 1.63
TSKU-201ENST00000333090 ATP2A2P16615 1042 aaKnown RBP25.22■■□□□ 1.63
TSKU-201ENST00000333090 PDE6BP35913 854 aa25.22■■□□□ 1.63
TSKU-201ENST00000333090 ARHGEF18Q6ZSZ5 1173 aa25.22■■□□□ 1.63
TSKU-201ENST00000333090 FAM71AQ8IYT1 594 aa25.22■■□□□ 1.63
TSKU-201ENST00000333090 SPDL1Q96EA4 605 aa25.22■■□□□ 1.63
TSKU-201ENST00000333090 LXNQ9BS40 222 aa25.22■■□□□ 1.63
TSKU-201ENST00000333090 PLVAPQ9BX97 442 aa25.22■■□□□ 1.63
TSKU-201ENST00000333090 SMCHD1A6NHR9 2005 aa25.22■■□□□ 1.63
TSKU-201ENST00000333090 FSCN2O14926 492 aa25.22■■□□□ 1.63
TSKU-201ENST00000333090 CETPP11597 493 aa25.22■■□□□ 1.63
TSKU-201ENST00000333090 MXI1P50539 228 aa25.22■■□□□ 1.63
TSKU-201ENST00000333090 KIAA0825Q8IV33 1275 aa25.22■■□□□ 1.63
TSKU-201ENST00000333090 SLCO2A1Q92959 643 aa25.22■■□□□ 1.63
TSKU-201ENST00000333090 KREMEN1Q96MU8 473 aa25.22■■□□□ 1.63
TSKU-201ENST00000333090 ZC3H12CQ9C0D7 883 aaKnown RBP25.22■■□□□ 1.63
TSKU-201ENST00000333090 SLC5A4Q9NY91 659 aa25.22■■□□□ 1.63
TSKU-201ENST00000333090 SPATA31A6Q5VVP1 1343 aa25.22■■□□□ 1.63
TSKU-201ENST00000333090 IVDP26440 423 aa25.21■■□□□ 1.63
TSKU-201ENST00000333090 MKRN3Q13064 507 aaKnown RBP25.21■■□□□ 1.63
Retrieved 100 of 20,778 RNA–protein pairs in 17.5 ms