RNA–Protein interactions for RNA: ENST00000332853.8

VSTM4-202, Transcript of V-set and transmembrane domain containing 4, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene VSTM4, Length 6,392 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VSTM4-202ENST00000332853 SART1O43290 800 aaKnown RBP13.82□□□□□ -0.2
VSTM4-202ENST00000332853 WEE2P0C1S8 567 aa13.82□□□□□ -0.2
VSTM4-202ENST00000332853 SREBF1P36956 1147 aa13.82□□□□□ -0.2
VSTM4-202ENST00000332853 NBPF12Q5TAG4 269 aaPredicted RBP13.82□□□□□ -0.2
VSTM4-202ENST00000332853 ZBED8Q8IZ13 594 aa13.82□□□□□ -0.2
VSTM4-202ENST00000332853 COG1Q8WTW3 980 aa13.82□□□□□ -0.2
VSTM4-202ENST00000332853 ERGIC2Q96RQ1 377 aa13.82□□□□□ -0.2
VSTM4-202ENST00000332853 DHX35Q9H5Z1 703 aaKnown RBP13.82□□□□□ -0.2
VSTM4-202ENST00000332853 TACC3Q9Y6A5 838 aa13.82□□□□□ -0.2
VSTM4-202ENST00000332853 HLA-DRAP01903 254 aa13.82□□□□□ -0.2
VSTM4-202ENST00000332853 RBBP8NLQ8NC74 664 aaPredicted RBP13.82□□□□□ -0.2
VSTM4-202ENST00000332853 RIN2Q8WYP3 895 aaPredicted RBP13.82□□□□□ -0.2
VSTM4-202ENST00000332853 MCEEQ96PE7 176 aa13.82□□□□□ -0.2
VSTM4-202ENST00000332853 PCDHAC2Q9Y5I4 1007 aa13.82□□□□□ -0.2
VSTM4-202ENST00000332853 PFASO15067 1338 aa13.82□□□□□ -0.2
VSTM4-202ENST00000332853 PEAK1Q9H792 1746 aa13.82□□□□□ -0.2
VSTM4-202ENST00000332853 IQANK1A0A1B0GTG1 560 aa13.82□□□□□ -0.2
VSTM4-202ENST00000332853 CYTH3O43739 400 aa13.82□□□□□ -0.2
VSTM4-202ENST00000332853 PDIA2Q13087 525 aaKnown RBP13.82□□□□□ -0.2
VSTM4-202ENST00000332853 SNCBQ16143 134 aa13.82□□□□□ -0.2
VSTM4-202ENST00000332853 SNF8Q96H20 258 aa13.82□□□□□ -0.2
VSTM4-202ENST00000332853 PON1P27169 355 aa13.82□□□□□ -0.2
VSTM4-202ENST00000332853 CDH6P55285 790 aa13.82□□□□□ -0.2
VSTM4-202ENST00000332853 ACTR2P61160 394 aa13.82□□□□□ -0.2
VSTM4-202ENST00000332853 AP1B1Q10567 949 aa13.82□□□□□ -0.2
VSTM4-202ENST00000332853 EFCAB12Q6NXP0 572 aa13.82□□□□□ -0.2
VSTM4-202ENST00000332853 TARS2Q9BW92 718 aaKnown RBP13.82□□□□□ -0.2
VSTM4-202ENST00000332853 TARSL2A2RTX5 802 aaKnown RBP13.82□□□□□ -0.2
VSTM4-202ENST00000332853 IZUMO3Q5VZ72 239 aa13.82□□□□□ -0.2
VSTM4-202ENST00000332853 TRIM72Q6ZMU5 477 aa13.82□□□□□ -0.2
VSTM4-202ENST00000332853 SMARCAD1Q9H4L7 1026 aa13.82□□□□□ -0.2
VSTM4-202ENST00000332853 TLK1Q9UKI8 766 aa13.82□□□□□ -0.2
VSTM4-202ENST00000332853 LTN1O94822 1766 aa13.81□□□□□ -0.2
VSTM4-202ENST00000332853 SLC26A4O43511 780 aa13.81□□□□□ -0.2
VSTM4-202ENST00000332853 TCF7P36402 384 aaPredicted RBP13.81□□□□□ -0.2
VSTM4-202ENST00000332853 SOX10P56693 466 aa13.81□□□□□ -0.2
VSTM4-202ENST00000332853 MMEL1Q495T6 779 aa13.81□□□□□ -0.2
VSTM4-202ENST00000332853 SH2D4BQ5SQS7 431 aa13.81□□□□□ -0.2
VSTM4-202ENST00000332853 KCNV1Q6PIU1 500 aa13.81□□□□□ -0.2
VSTM4-202ENST00000332853 THEM5Q8N1Q8 247 aa13.81□□□□□ -0.2
VSTM4-202ENST00000332853 GMCL1P1Q8NEA9 526 aa13.81□□□□□ -0.2
VSTM4-202ENST00000332853 BTBD6Q96KE9 485 aa13.81□□□□□ -0.2
VSTM4-202ENST00000332853 TBX20Q9UMR3 447 aa13.81□□□□□ -0.2
VSTM4-202ENST00000332853 BNIP3LO60238 219 aa13.81□□□□□ -0.2
VSTM4-202ENST00000332853 CTSHP09668 335 aa13.81□□□□□ -0.2
VSTM4-202ENST00000332853 ARSEP51690 589 aa13.81□□□□□ -0.2
VSTM4-202ENST00000332853 ASPHQ12797 758 aa13.81□□□□□ -0.2
VSTM4-202ENST00000332853 TSTA3Q13630 321 aaPredicted RBP13.81□□□□□ -0.2
VSTM4-202ENST00000332853 E2F5Q15329 346 aa13.81□□□□□ -0.2
VSTM4-202ENST00000332853 EPM2AIP1Q7L775 607 aaPredicted RBP13.81□□□□□ -0.2
VSTM4-202ENST00000332853 CELF4Q9BZC1 486 aaKnown RBP13.81□□□□□ -0.2
VSTM4-202ENST00000332853 EHD4Q9H223 541 aa13.81□□□□□ -0.2
VSTM4-202ENST00000332853 SLITRK6Q9H5Y7 841 aa13.81□□□□□ -0.2
VSTM4-202ENST00000332853 SNX9Q9Y5X1 595 aa13.81□□□□□ -0.2
VSTM4-202ENST00000332853 DLG5Q8TDM6 1919 aa13.81□□□□□ -0.2
VSTM4-202ENST00000332853 VGLL3A8MV65 326 aa13.81□□□□□ -0.2
VSTM4-202ENST00000332853 SPAG7O75391 227 aa13.81□□□□□ -0.2
VSTM4-202ENST00000332853 GRAP2O75791 330 aa13.81□□□□□ -0.2
VSTM4-202ENST00000332853 MXD4Q14582 209 aaPredicted RBP13.81□□□□□ -0.2
VSTM4-202ENST00000332853 ANKMY2Q8IV38 441 aa13.81□□□□□ -0.2
VSTM4-202ENST00000332853 SH2D3CQ8N5H7 860 aa13.81□□□□□ -0.2
VSTM4-202ENST00000332853 CALR3Q96L12 384 aaKnown RBP13.81□□□□□ -0.2
VSTM4-202ENST00000332853 POP1Q99575 1024 aaKnown RBP13.81□□□□□ -0.2
VSTM4-202ENST00000332853 TMX2Q9Y320 296 aa13.81□□□□□ -0.2
VSTM4-202ENST00000332853 SNAPC2Q13487 334 aa13.81□□□□□ -0.2
VSTM4-202ENST00000332853 SPOPLQ6IQ16 392 aa13.81□□□□□ -0.2
VSTM4-202ENST00000332853 NUDT12Q9BQG2 462 aa13.81□□□□□ -0.2
VSTM4-202ENST00000332853 TRIM56Q9BRZ2 755 aaKnown RBP13.81□□□□□ -0.2
VSTM4-202ENST00000332853 PACSIN1Q9BY11 444 aa13.81□□□□□ -0.2
VSTM4-202ENST00000332853 VCX3BQ9H321 246 aa13.81□□□□□ -0.2
VSTM4-202ENST00000332853 A0A1B0GUA9 196 aa13.81□□□□□ -0.2
VSTM4-202ENST00000332853 PDGFRBP09619 1106 aa13.81□□□□□ -0.2
VSTM4-202ENST00000332853 CXCL9Q07325 125 aa13.81□□□□□ -0.2
VSTM4-202ENST00000332853 TFDP2Q14188 446 aa13.81□□□□□ -0.2
VSTM4-202ENST00000332853 TTC13Q8NBP0 860 aa13.81□□□□□ -0.2
VSTM4-202ENST00000332853 GMCL1Q96IK5 515 aa13.81□□□□□ -0.2
VSTM4-202ENST00000332853 RAD51CO43502 376 aa13.8□□□□□ -0.2
VSTM4-202ENST00000332853 PGK2P07205 417 aa13.8□□□□□ -0.2
VSTM4-202ENST00000332853 RPS12P25398 132 aaKnown RBP13.8□□□□□ -0.2
VSTM4-202ENST00000332853 SERPINB6P35237 376 aa13.8□□□□□ -0.2
VSTM4-202ENST00000332853 ROR1Q01973 937 aa13.8□□□□□ -0.2
VSTM4-202ENST00000332853 APOBEC3HQ6NTF7 200 aaKnown RBP13.8□□□□□ -0.2
VSTM4-202ENST00000332853 BBS5Q8N3I7 341 aa13.8□□□□□ -0.2
VSTM4-202ENST00000332853 KIAA0895Q8NCT3 520 aa13.8□□□□□ -0.2
VSTM4-202ENST00000332853 OR2W6PQ8NHA6 318 aa13.8□□□□□ -0.2
VSTM4-202ENST00000332853 KLHL29Q96CT2 875 aa13.8□□□□□ -0.2
VSTM4-202ENST00000332853 TMEM8AQ9HCN3 771 aa13.8□□□□□ -0.2
VSTM4-202ENST00000332853 KRT7P08729 469 aa13.8□□□□□ -0.2
VSTM4-202ENST00000332853 KRT3P12035 628 aa13.8□□□□□ -0.2
VSTM4-202ENST00000332853 COMTP21964 271 aa13.8□□□□□ -0.2
VSTM4-202ENST00000332853 PPP2R2AP63151 447 aa13.8□□□□□ -0.2
VSTM4-202ENST00000332853 DDX42Q86XP3 938 aaKnown RBP eCLIP13.8□□□□□ -0.2
VSTM4-202ENST00000332853 ELMO3Q96BJ8 720 aa13.8□□□□□ -0.2
VSTM4-202ENST00000332853 CYP26B1Q9NR63 512 aa13.8□□□□□ -0.2
VSTM4-202ENST00000332853 CCDC195A0A1B0GUA6 201 aa13.8□□□□□ -0.2
VSTM4-202ENST00000332853 FAM187AA6NFU0 413 aa13.8□□□□□ -0.2
VSTM4-202ENST00000332853 VCAM1P19320 739 aa13.8□□□□□ -0.2
VSTM4-202ENST00000332853 C2CD6Q53TS8 623 aa13.8□□□□□ -0.2
VSTM4-202ENST00000332853 SCFD1Q8WVM8 642 aa13.8□□□□□ -0.2
VSTM4-202ENST00000332853 KITP10721 976 aa13.8□□□□□ -0.2
Retrieved 100 of 20,778 RNA–protein pairs in 27.3 ms