RNA–Protein interactions for RNA: ENST00000331433.4

CLCNKA-201, Transcript of chloride voltage-gated channel Ka, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene CLCNKA, Length 2,475 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLCNKA-201ENST00000331433 COMTP21964 271 aa15.99■□□□□ 0.15
CLCNKA-201ENST00000331433 GARTP22102 1010 aa15.99■□□□□ 0.15
CLCNKA-201ENST00000331433 LIG4P49917 911 aa15.99■□□□□ 0.15
CLCNKA-201ENST00000331433 PDE6CP51160 858 aa15.99■□□□□ 0.15
CLCNKA-201ENST00000331433 WNT7BP56706 349 aa15.99■□□□□ 0.15
CLCNKA-201ENST00000331433 POU5F1Q01860 360 aaKnown RBP15.99■□□□□ 0.15
CLCNKA-201ENST00000331433 STXBP2Q15833 593 aa15.99■□□□□ 0.15
CLCNKA-201ENST00000331433 NOL9Q5SY16 702 aaKnown RBP15.99■□□□□ 0.15
CLCNKA-201ENST00000331433 MAATS1Q7Z4T9 603 aa15.99■□□□□ 0.15
CLCNKA-201ENST00000331433 CCDC26Q8TAB7 109 aa15.99■□□□□ 0.15
CLCNKA-201ENST00000331433 SGIP1Q9BQI5 828 aa15.99■□□□□ 0.15
CLCNKA-201ENST00000331433 DPH5Q9H2P9 285 aa15.99■□□□□ 0.15
CLCNKA-201ENST00000331433 ZNF302Q9NR11 478 aa15.99■□□□□ 0.15
CLCNKA-201ENST00000331433 SYNGAP1Q96PV0 1343 aa15.99■□□□□ 0.15
CLCNKA-201ENST00000331433 USP2O75604 605 aaPredicted RBP15.99■□□□□ 0.15
CLCNKA-201ENST00000331433 KRT5P13647 590 aa15.99■□□□□ 0.15
CLCNKA-201ENST00000331433 FLT3P36888 993 aa15.99■□□□□ 0.15
CLCNKA-201ENST00000331433 HSPA9P38646 679 aaKnown RBP15.99■□□□□ 0.15
CLCNKA-201ENST00000331433 CDR2Q01850 454 aa15.99■□□□□ 0.15
CLCNKA-201ENST00000331433 VGLL4Q14135 290 aa15.99■□□□□ 0.15
CLCNKA-201ENST00000331433 USP37Q86T82 979 aa15.99■□□□□ 0.15
CLCNKA-201ENST00000331433 ASAP3Q8TDY4 903 aa15.99■□□□□ 0.15
CLCNKA-201ENST00000331433 ZNF516Q92618 1163 aa15.99■□□□□ 0.15
CLCNKA-201ENST00000331433 TRIM31Q9BZY9 425 aa15.99■□□□□ 0.15
CLCNKA-201ENST00000331433 DIS3Q9Y2L1 958 aaKnown RBP15.99■□□□□ 0.15
CLCNKA-201ENST00000331433 GTF2H1P32780 548 aa15.98■□□□□ 0.15
CLCNKA-201ENST00000331433 DDX1Q92499 740 aaKnown RBP15.98■□□□□ 0.15
CLCNKA-201ENST00000331433 ZNF653Q96CK0 615 aa15.98■□□□□ 0.15
CLCNKA-201ENST00000331433 ZSWIM1Q9BR11 485 aa15.98■□□□□ 0.15
CLCNKA-201ENST00000331433 NUP85Q9BW27 656 aa15.98■□□□□ 0.15
CLCNKA-201ENST00000331433 TRPC6Q9Y210 931 aa15.98■□□□□ 0.15
CLCNKA-201ENST00000331433 PLAAQ9Y263 795 aa15.98■□□□□ 0.15
CLCNKA-201ENST00000331433 SNCAIPQ9Y6H5 919 aa15.98■□□□□ 0.15
CLCNKA-201ENST00000331433 OATP04181 439 aa15.97■□□□□ 0.15
CLCNKA-201ENST00000331433 ACOT2P49753 483 aa15.97■□□□□ 0.15
CLCNKA-201ENST00000331433 NLRP11P59045 1033 aaKnown RBP15.97■□□□□ 0.15
CLCNKA-201ENST00000331433 PTENP60484 403 aa15.97■□□□□ 0.15
CLCNKA-201ENST00000331433 TCEAL1Q15170 157 aa15.97■□□□□ 0.15
CLCNKA-201ENST00000331433 EIF1ADQ8N9N8 165 aaKnown RBP15.97■□□□□ 0.15
CLCNKA-201ENST00000331433 ZNF564Q8TBZ8 553 aaPredicted RBP15.97■□□□□ 0.15
CLCNKA-201ENST00000331433 DGCR8Q8WYQ5 773 aaKnown RBP eCLIP15.97■□□□□ 0.15
CLCNKA-201ENST00000331433 ZBTB45Q96K62 511 aaPredicted RBP15.97■□□□□ 0.15
CLCNKA-201ENST00000331433 BTBD7Q9P203 1132 aa15.97■□□□□ 0.15
CLCNKA-201ENST00000331433 MAFBQ9Y5Q3 323 aaPredicted RBP15.97■□□□□ 0.15
CLCNKA-201ENST00000331433 WDR90Q96KV7 1748 aa15.97■□□□□ 0.15
CLCNKA-201ENST00000331433 LRRIQ4A6NIV6 560 aa15.97■□□□□ 0.15
CLCNKA-201ENST00000331433 RPS6KA5O75582 802 aa15.97■□□□□ 0.15
CLCNKA-201ENST00000331433 HSD17B3P37058 310 aa15.97■□□□□ 0.15
CLCNKA-201ENST00000331433 UAP1Q16222 522 aaPredicted RBP15.97■□□□□ 0.15
CLCNKA-201ENST00000331433 TTC19Q6DKK2 380 aaPredicted RBP15.97■□□□□ 0.15
CLCNKA-201ENST00000331433 GLG1Q92896 1179 aa15.97■□□□□ 0.15
CLCNKA-201ENST00000331433 HAPLN2Q9GZV7 340 aa15.97■□□□□ 0.15
CLCNKA-201ENST00000331433 MYPNQ86TC9 1320 aa15.97■□□□□ 0.15
CLCNKA-201ENST00000331433 EXTL3O43909 919 aa15.96■□□□□ 0.15
CLCNKA-201ENST00000331433 GRIN3BO60391 1043 aa15.96■□□□□ 0.15
CLCNKA-201ENST00000331433 GLRA2P23416 452 aa15.96■□□□□ 0.15
CLCNKA-201ENST00000331433 ALDH5A1P51649 535 aaPredicted RBP15.96■□□□□ 0.15
CLCNKA-201ENST00000331433 SH3D19Q5HYK7 790 aa15.96■□□□□ 0.15
CLCNKA-201ENST00000331433 UBL4BQ8N7F7 174 aa15.96■□□□□ 0.15
CLCNKA-201ENST00000331433 CHST13Q8NET6 341 aa15.96■□□□□ 0.15
CLCNKA-201ENST00000331433 DNERQ8NFT8 737 aa15.96■□□□□ 0.15
CLCNKA-201ENST00000331433 NAP1L3Q99457 506 aaPredicted RBP15.96■□□□□ 0.15
CLCNKA-201ENST00000331433 UTP11Q9Y3A2 253 aaKnown RBP15.96■□□□□ 0.15
CLCNKA-201ENST00000331433 PPP2R3BQ9Y5P8 575 aa15.96■□□□□ 0.15
CLCNKA-201ENST00000331433 PTPRJQ12913 1337 aa15.96■□□□□ 0.15
CLCNKA-201ENST00000331433 GOLGA6L10A0A0M3HER8 536 aa15.96■□□□□ 0.15
CLCNKA-201ENST00000331433 MIF4GDA9UHW6 222 aaKnown RBP15.96■□□□□ 0.15
CLCNKA-201ENST00000331433 SHOX2O60902 331 aaPredicted RBP15.96■□□□□ 0.15
CLCNKA-201ENST00000331433 CYP1A2P05177 515 aa15.96■□□□□ 0.15
CLCNKA-201ENST00000331433 TNNI1P19237 187 aa15.96■□□□□ 0.15
CLCNKA-201ENST00000331433 UBA1P22314 1058 aaKnown RBP15.96■□□□□ 0.15
CLCNKA-201ENST00000331433 DR1Q01658 176 aa15.96■□□□□ 0.15
CLCNKA-201ENST00000331433 STRN3Q13033 797 aa15.96■□□□□ 0.15
CLCNKA-201ENST00000331433 ZBTB41Q5SVQ8 909 aa15.96■□□□□ 0.15
CLCNKA-201ENST00000331433 SPOPLQ6IQ16 392 aa15.96■□□□□ 0.15
CLCNKA-201ENST00000331433 C15orf39Q6ZRI6 1047 aa15.96■□□□□ 0.15
CLCNKA-201ENST00000331433 GPC2Q8N158 579 aa15.96■□□□□ 0.15
CLCNKA-201ENST00000331433 OR2W6PQ8NHA6 318 aa15.96■□□□□ 0.15
CLCNKA-201ENST00000331433 SEC14L1Q92503 715 aa15.96■□□□□ 0.15
CLCNKA-201ENST00000331433 PORCNQ9H237 461 aa15.96■□□□□ 0.15
CLCNKA-201ENST00000331433 DHX33Q9H6R0 707 aaKnown RBP15.96■□□□□ 0.15
CLCNKA-201ENST00000331433 AGO2Q9UKV8 859 aaKnown RBP15.96■□□□□ 0.15
CLCNKA-201ENST00000331433 H0YCG3 227 aa15.95■□□□□ 0.14
CLCNKA-201ENST00000331433 MTA2O94776 668 aa15.95■□□□□ 0.14
CLCNKA-201ENST00000331433 CLSTN1O94985 981 aa15.95■□□□□ 0.14
CLCNKA-201ENST00000331433 ATG7O95352 703 aa15.95■□□□□ 0.14
CLCNKA-201ENST00000331433 EDN1P05305 212 aa15.95■□□□□ 0.14
CLCNKA-201ENST00000331433 ICAM3P32942 547 aa15.95■□□□□ 0.14
CLCNKA-201ENST00000331433 PEX5P50542 639 aa15.95■□□□□ 0.14
CLCNKA-201ENST00000331433 GCNT1Q02742 428 aa15.95■□□□□ 0.14
CLCNKA-201ENST00000331433 CEP85LQ5SZL2 805 aa15.95■□□□□ 0.14
CLCNKA-201ENST00000331433 LBX2Q6XYB7 198 aa15.95■□□□□ 0.14
CLCNKA-201ENST00000331433 PSPC1Q8WXF1 523 aaKnown RBP15.95■□□□□ 0.14
CLCNKA-201ENST00000331433 FNBP1Q96RU3 617 aa15.95■□□□□ 0.14
CLCNKA-201ENST00000331433 RPS6KC1Q96S38 1066 aa15.95■□□□□ 0.14
CLCNKA-201ENST00000331433 CAPS2Q9BXY5 557 aa15.95■□□□□ 0.14
CLCNKA-201ENST00000331433 C1orf112Q9NSG2 853 aa15.95■□□□□ 0.14
CLCNKA-201ENST00000331433 ANKFY1Q9P2R3 1169 aa15.95■□□□□ 0.14
CLCNKA-201ENST00000331433 GTF3C4Q9UKN8 822 aa15.95■□□□□ 0.14
CLCNKA-201ENST00000331433 SPOPO43791 374 aa15.95■□□□□ 0.14
Retrieved 100 of 20,778 RNA–protein pairs in 43.7 ms