RNA–Protein interactions for RNA: ENST00000330374.6

VMA21-201, Transcript of VMA21, vacuolar ATPase assembly factor, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene VMA21, Length 4,717 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VMA21-201ENST00000330374 FAM86B2P0C5J1 330 aa8.43□□□□□ -1.06
VMA21-201ENST00000330374 CETPP11597 493 aa8.43□□□□□ -1.06
VMA21-201ENST00000330374 ZNF16P17020 682 aaPredicted RBP8.43□□□□□ -1.06
VMA21-201ENST00000330374 CALRP27797 417 aaKnown RBP8.43□□□□□ -1.06
VMA21-201ENST00000330374 SCNN1DP51172 638 aa8.43□□□□□ -1.06
VMA21-201ENST00000330374 MXRA7P84157 204 aa8.43□□□□□ -1.06
VMA21-201ENST00000330374 EPC2Q52LR7 807 aa8.43□□□□□ -1.06
VMA21-201ENST00000330374 ZFYVE27Q5T4F4 411 aa8.43□□□□□ -1.06
VMA21-201ENST00000330374 TPTE2Q6XPS3 522 aa8.43□□□□□ -1.06
VMA21-201ENST00000330374 SLC13A5Q86YT5 568 aaPredicted RBP8.43□□□□□ -1.06
VMA21-201ENST00000330374 ARHGEF19Q8IW93 802 aa8.43□□□□□ -1.06
VMA21-201ENST00000330374 TTC8Q8TAM2 541 aa8.43□□□□□ -1.06
VMA21-201ENST00000330374 TBC1D16Q8TBP0 767 aa8.43□□□□□ -1.06
VMA21-201ENST00000330374 RXFP1Q9HBX9 757 aa8.43□□□□□ -1.06
VMA21-201ENST00000330374 CHST7Q9NS84 486 aa8.43□□□□□ -1.06
VMA21-201ENST00000330374 TTC7AQ9ULT0 858 aaPredicted RBP8.43□□□□□ -1.06
VMA21-201ENST00000330374 NCANO14594 1321 aa8.43□□□□□ -1.06
VMA21-201ENST00000330374 LAMB1P07942 1786 aa8.43□□□□□ -1.06
VMA21-201ENST00000330374 ROBO3Q96MS0 1386 aa8.43□□□□□ -1.06
VMA21-201ENST00000330374 WDR91A4D1P6 747 aa8.43□□□□□ -1.06
VMA21-201ENST00000330374 PIAS1O75925 651 aa8.43□□□□□ -1.06
VMA21-201ENST00000330374 SGPL1O95470 568 aa8.43□□□□□ -1.06
VMA21-201ENST00000330374 PPP4CP60510 307 aa8.43□□□□□ -1.06
VMA21-201ENST00000330374 GRIK3Q13003 919 aa8.43□□□□□ -1.06
VMA21-201ENST00000330374 OLIG1Q8TAK6 271 aa8.43□□□□□ -1.06
VMA21-201ENST00000330374 NUDCD1Q96RS6 583 aa8.43□□□□□ -1.06
VMA21-201ENST00000330374 NUP85Q9BW27 656 aa8.43□□□□□ -1.06
VMA21-201ENST00000330374 GPR88Q9GZN0 384 aa8.43□□□□□ -1.06
VMA21-201ENST00000330374 ZCWPW1Q9H0M4 648 aa8.43□□□□□ -1.06
VMA21-201ENST00000330374 DNAJC18Q9H819 358 aa8.43□□□□□ -1.06
VMA21-201ENST00000330374 ARHGEF3Q9NR81 526 aa8.43□□□□□ -1.06
VMA21-201ENST00000330374 CNOT7Q9UIV1 285 aaKnown RBP8.43□□□□□ -1.06
VMA21-201ENST00000330374 KCNG1Q9UIX4 513 aa8.43□□□□□ -1.06
VMA21-201ENST00000330374 PITPNM2Q9BZ72 1349 aa8.43□□□□□ -1.06
VMA21-201ENST00000330374 DDX39AO00148 427 aaKnown RBP8.42□□□□□ -1.06
VMA21-201ENST00000330374 ENTPD5O75356 428 aa8.42□□□□□ -1.06
VMA21-201ENST00000330374 ATP2B4P23634 1241 aa8.42□□□□□ -1.06
VMA21-201ENST00000330374 FOXN2P32314 431 aa8.42□□□□□ -1.06
VMA21-201ENST00000330374 ITGA8P53708 1063 aa8.42□□□□□ -1.06
VMA21-201ENST00000330374 CACNB3P54284 484 aa8.42□□□□□ -1.06
VMA21-201ENST00000330374 GPC5P78333 572 aa8.42□□□□□ -1.06
VMA21-201ENST00000330374 MTM1Q13496 603 aa8.42□□□□□ -1.06
VMA21-201ENST00000330374 SETDB1Q15047 1291 aa8.42□□□□□ -1.06
VMA21-201ENST00000330374 GALNTL6Q49A17 601 aa8.42□□□□□ -1.06
VMA21-201ENST00000330374 ODR4Q5SWX8 454 aa8.42□□□□□ -1.06
VMA21-201ENST00000330374 AP1ARQ63HQ0 302 aa8.42□□□□□ -1.06
VMA21-201ENST00000330374 CGB2Q6NT52 195 aa8.42□□□□□ -1.06
VMA21-201ENST00000330374 FAM178BQ8IXR5 827 aa8.42□□□□□ -1.06
VMA21-201ENST00000330374 PPM1KQ8N3J5 372 aa8.42□□□□□ -1.06
VMA21-201ENST00000330374 ZNF653Q96CK0 615 aa8.42□□□□□ -1.06
VMA21-201ENST00000330374 RUNDC3BQ96NL0 473 aa8.42□□□□□ -1.06
VMA21-201ENST00000330374 EIF2AK1Q9BQI3 630 aaKnown RBP8.42□□□□□ -1.06
VMA21-201ENST00000330374 DPPA5A6NC42 116 aa8.42□□□□□ -1.06
VMA21-201ENST00000330374 RASA4BC9J798 803 aa8.42□□□□□ -1.06
VMA21-201ENST00000330374 CYP26A1O43174 497 aa8.42□□□□□ -1.06
VMA21-201ENST00000330374 RASA4O43374 803 aa8.42□□□□□ -1.06
VMA21-201ENST00000330374 LINGO3P0C6S8 592 aa8.42□□□□□ -1.06
VMA21-201ENST00000330374 CHRNB2P17787 502 aa8.42□□□□□ -1.06
VMA21-201ENST00000330374 EPHB2P29323 1055 aa8.42□□□□□ -1.06
VMA21-201ENST00000330374 TUBP50607 506 aa8.42□□□□□ -1.06
VMA21-201ENST00000330374 GTF2IP78347 998 aa8.42□□□□□ -1.06
VMA21-201ENST00000330374 TCP10Q12799 353 aa8.42□□□□□ -1.06
VMA21-201ENST00000330374 HYIQ5T013 277 aa8.42□□□□□ -1.06
VMA21-201ENST00000330374 MIGA2Q7L4E1 593 aa8.42□□□□□ -1.06
VMA21-201ENST00000330374 EPM2AIP1Q7L775 607 aaPredicted RBP8.42□□□□□ -1.06
VMA21-201ENST00000330374 C4orf33Q8N1A6 199 aa8.42□□□□□ -1.06
VMA21-201ENST00000330374 CKAP2Q8WWK9 683 aa8.42□□□□□ -1.06
VMA21-201ENST00000330374 ART4Q93070 314 aa8.42□□□□□ -1.06
VMA21-201ENST00000330374 TRIM63Q969Q1 353 aa8.42□□□□□ -1.06
VMA21-201ENST00000330374 UTP4Q969X6 686 aaKnown RBP8.42□□□□□ -1.06
VMA21-201ENST00000330374 ZFATQ9P243 1243 aa8.42□□□□□ -1.06
VMA21-201ENST00000330374 DYNC1LI1Q9Y6G9 523 aaKnown RBP8.42□□□□□ -1.06
VMA21-201ENST00000330374 EMSYQ7Z589 1322 aa8.42□□□□□ -1.06
VMA21-201ENST00000330374 GOLGA8IPA6NC78 632 aa8.42□□□□□ -1.06
VMA21-201ENST00000330374 GOLGA8JA6NMD2 632 aa8.42□□□□□ -1.06
VMA21-201ENST00000330374 GBP1P32455 592 aa8.42□□□□□ -1.06
VMA21-201ENST00000330374 RHBDL3P58872 404 aa8.42□□□□□ -1.06
VMA21-201ENST00000330374 RINT1Q6NUQ1 792 aa8.42□□□□□ -1.06
VMA21-201ENST00000330374 LLGL2Q6P1M3 1020 aa8.42□□□□□ -1.06
VMA21-201ENST00000330374 FOXR2Q6PJQ5 311 aa8.42□□□□□ -1.06
VMA21-201ENST00000330374 RFX8Q6ZV50 586 aa8.42□□□□□ -1.06
VMA21-201ENST00000330374 PTF1AQ7RTS3 328 aa8.42□□□□□ -1.06
VMA21-201ENST00000330374 RHOT2Q8IXI1 618 aa8.42□□□□□ -1.06
VMA21-201ENST00000330374 ZC3H3Q8IXZ2 948 aaKnown RBP8.42□□□□□ -1.06
VMA21-201ENST00000330374 SLFN12Q8IYM2 578 aa8.42□□□□□ -1.06
VMA21-201ENST00000330374 TAB3Q8N5C8 712 aaPredicted RBP8.42□□□□□ -1.06
VMA21-201ENST00000330374 GBP7Q8N8V2 638 aaPredicted RBP8.42□□□□□ -1.06
VMA21-201ENST00000330374 ZNF564Q8TBZ8 553 aaPredicted RBP8.42□□□□□ -1.06
VMA21-201ENST00000330374 FAM84AQ96KN4 292 aa8.42□□□□□ -1.06
VMA21-201ENST00000330374 CD209Q9NNX6 404 aa8.42□□□□□ -1.06
VMA21-201ENST00000330374 AAASQ9NRG9 546 aa8.42□□□□□ -1.06
VMA21-201ENST00000330374 DIS3Q9Y2L1 958 aaKnown RBP8.42□□□□□ -1.06
VMA21-201ENST00000330374 MYO3BQ8WXR4 1341 aa8.42□□□□□ -1.06
VMA21-201ENST00000330374 DCCP43146 1447 aa8.42□□□□□ -1.06
VMA21-201ENST00000330374 hCG_1984214I3L0E3 225 aa8.42□□□□□ -1.06
VMA21-201ENST00000330374 OAS1P00973 400 aaKnown RBP8.42□□□□□ -1.06
VMA21-201ENST00000330374 RPA1P27694 616 aa8.42□□□□□ -1.06
VMA21-201ENST00000330374 CLEC4GQ6UXB4 293 aa8.42□□□□□ -1.06
VMA21-201ENST00000330374 ZNF713Q8N859 430 aaPredicted RBP8.42□□□□□ -1.06
VMA21-201ENST00000330374 ZSWIM2Q8NEG5 633 aa8.42□□□□□ -1.06
Retrieved 100 of 20,778 RNA–protein pairs in 20.2 ms