RNA–Protein interactions for RNA: ENST00000327554.2

CCDC60-201, Transcript of coiled-coil domain containing 60, humanhuman

APPRIS P2 TSL 1 (best) BASIC

Gene CCDC60, Length 2,450 nt, Biotype protein coding.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC60-201ENST00000327554 TJP3O95049 919 aa13.65□□□□□ -0.22
CCDC60-201ENST00000327554 ITIH2P19823 946 aa13.65□□□□□ -0.22
CCDC60-201ENST00000327554 KCNA3P22001 575 aa13.65□□□□□ -0.22
CCDC60-201ENST00000327554 STAT3P40763 770 aa13.65□□□□□ -0.22
CCDC60-201ENST00000327554 FMO5P49326 533 aa13.65□□□□□ -0.22
CCDC60-201ENST00000327554 RBM5P52756 815 aaKnown RBP eCLIP13.65□□□□□ -0.22
CCDC60-201ENST00000327554 PSMC6P62333 389 aa13.65□□□□□ -0.22
CCDC60-201ENST00000327554 DYNC1I2Q13409 638 aaKnown RBP13.65□□□□□ -0.22
CCDC60-201ENST00000327554 MESDQ14696 234 aa13.65□□□□□ -0.22
CCDC60-201ENST00000327554 DENND1AQ8TEH3 1009 aa13.65□□□□□ -0.22
CCDC60-201ENST00000327554 MAIP1Q8WWC4 291 aa13.65□□□□□ -0.22
CCDC60-201ENST00000327554 AZIN2Q96A70 460 aa13.65□□□□□ -0.22
CCDC60-201ENST00000327554 AGPAT1Q99943 283 aa13.65□□□□□ -0.22
CCDC60-201ENST00000327554 PAIP2Q9BPZ3 127 aaKnown RBP13.65□□□□□ -0.22
CCDC60-201ENST00000327554 WNT8AQ9H1J5 351 aa13.65□□□□□ -0.22
CCDC60-201ENST00000327554 LMCD1Q9NZU5 365 aa13.65□□□□□ -0.22
CCDC60-201ENST00000327554 GRID1Q9ULK0 1009 aa13.65□□□□□ -0.22
CCDC60-201ENST00000327554 FTLP02792 175 aaPredicted RBP13.65□□□□□ -0.22
CCDC60-201ENST00000327554 SKIP12755 728 aa13.65□□□□□ -0.22
CCDC60-201ENST00000327554 MUTP22033 750 aa13.65□□□□□ -0.22
CCDC60-201ENST00000327554 HIBADHP31937 336 aaKnown RBP13.65□□□□□ -0.22
CCDC60-201ENST00000327554 TAF1BQ53T94 588 aaPredicted RBP13.65□□□□□ -0.22
CCDC60-201ENST00000327554 DSTYKQ6XUX3 929 aa13.65□□□□□ -0.22
CCDC60-201ENST00000327554 PRUNE1Q86TP1 453 aa13.65□□□□□ -0.22
CCDC60-201ENST00000327554 ANKRD35Q8N283 1001 aa13.65□□□□□ -0.22
CCDC60-201ENST00000327554 TGFBRAP1Q8WUH2 860 aa13.65□□□□□ -0.22
CCDC60-201ENST00000327554 MAML1Q92585 1016 aa13.65□□□□□ -0.22
CCDC60-201ENST00000327554 CEP95Q96GE4 821 aa13.65□□□□□ -0.22
CCDC60-201ENST00000327554 SNF8Q96H20 258 aa13.65□□□□□ -0.22
CCDC60-201ENST00000327554 PWWP2AQ96N64 755 aa13.65□□□□□ -0.22
CCDC60-201ENST00000327554 IKZF4Q9H2S9 585 aa13.65□□□□□ -0.22
CCDC60-201ENST00000327554 CHORDC1Q9UHD1 332 aaPredicted RBP13.65□□□□□ -0.22
CCDC60-201ENST00000327554 SAP30BPQ9UHR5 308 aaKnown RBP13.65□□□□□ -0.22
CCDC60-201ENST00000327554 NUMBLQ9Y6R0 609 aa13.65□□□□□ -0.22
CCDC60-201ENST00000327554 MYO3BQ8WXR4 1341 aa13.64□□□□□ -0.23
CCDC60-201ENST00000327554 RSPH10B2B2RC85 870 aa13.64□□□□□ -0.23
CCDC60-201ENST00000327554 TGFB1I1O43294 461 aa13.64□□□□□ -0.23
CCDC60-201ENST00000327554 SLC26A4O43511 780 aa13.64□□□□□ -0.23
CCDC60-201ENST00000327554 RSPH10BP0C881 870 aa13.64□□□□□ -0.23
CCDC60-201ENST00000327554 DLATP10515 647 aaKnown RBP13.64□□□□□ -0.23
CCDC60-201ENST00000327554 RANBP1P43487 201 aa13.64□□□□□ -0.23
CCDC60-201ENST00000327554 ITGA8P53708 1063 aa13.64□□□□□ -0.23
CCDC60-201ENST00000327554 RCN1Q15293 331 aa13.64□□□□□ -0.23
CCDC60-201ENST00000327554 CTC1Q2NKJ3 1217 aa13.64□□□□□ -0.23
CCDC60-201ENST00000327554 CBWD6Q4V339 395 aa13.64□□□□□ -0.23
CCDC60-201ENST00000327554 ZC2HC1CQ53FD0 456 aaPredicted RBP13.64□□□□□ -0.23
CCDC60-201ENST00000327554 CBWD3Q5JTY5 395 aa13.64□□□□□ -0.23
CCDC60-201ENST00000327554 CBWD5Q5RIA9 395 aa13.64□□□□□ -0.23
CCDC60-201ENST00000327554 INTS5Q6P9B9 1019 aaKnown RBP13.64□□□□□ -0.23
CCDC60-201ENST00000327554 CCNJLQ8IV13 435 aa13.64□□□□□ -0.23
CCDC60-201ENST00000327554 C1orf54Q8WWF1 131 aa13.64□□□□□ -0.23
CCDC60-201ENST00000327554 CADM1Q9BY67 442 aaKnown RBP13.64□□□□□ -0.23
CCDC60-201ENST00000327554 UBE2OQ9C0C9 1292 aaKnown RBP13.64□□□□□ -0.23
CCDC60-201ENST00000327554 INTS2Q9H0H0 1204 aaKnown RBP13.64□□□□□ -0.23
CCDC60-201ENST00000327554 ASIC3Q9UHC3 531 aa13.64□□□□□ -0.23
CCDC60-201ENST00000327554 ZMYM2Q9UBW7 1377 aa13.64□□□□□ -0.23
CCDC60-201ENST00000327554 RASA4BC9J798 803 aa13.64□□□□□ -0.23
CCDC60-201ENST00000327554 PDLIM1O00151 329 aa13.64□□□□□ -0.23
CCDC60-201ENST00000327554 RASA4O43374 803 aa13.64□□□□□ -0.23
CCDC60-201ENST00000327554 PPP1R11O60927 126 aaPredicted RBP13.64□□□□□ -0.23
CCDC60-201ENST00000327554 SPAG7O75391 227 aa13.64□□□□□ -0.23
CCDC60-201ENST00000327554 KRT36O76013 467 aa13.64□□□□□ -0.23
CCDC60-201ENST00000327554 CDK8P49336 464 aa13.64□□□□□ -0.23
CCDC60-201ENST00000327554 GPC5P78333 572 aa13.64□□□□□ -0.23
CCDC60-201ENST00000327554 PABPC4Q13310 644 aaKnown RBP eCLIP13.64□□□□□ -0.23
CCDC60-201ENST00000327554 CCDC6Q16204 474 aa13.64□□□□□ -0.23
CCDC60-201ENST00000327554 ARHGAP44Q17R89 818 aa13.64□□□□□ -0.23
CCDC60-201ENST00000327554 SESTD1Q86VW0 696 aa13.64□□□□□ -0.23
CCDC60-201ENST00000327554 FAM186BQ8IYM0 893 aa13.64□□□□□ -0.23
CCDC60-201ENST00000327554 CELF1Q92879 486 aaKnown RBP13.64□□□□□ -0.23
CCDC60-201ENST00000327554 CYLDQ9NQC7 956 aa13.64□□□□□ -0.23
CCDC60-201ENST00000327554 APEX2Q9UBZ4 518 aa13.64□□□□□ -0.23
CCDC60-201ENST00000327554 MAGEA13PA6NCF6 341 aa13.63□□□□□ -0.23
CCDC60-201ENST00000327554 FAM196BA6NMK8 535 aa13.63□□□□□ -0.23
CCDC60-201ENST00000327554 FOXN3O00409 490 aaPredicted RBP13.63□□□□□ -0.23
CCDC60-201ENST00000327554 MTA2O94776 668 aa13.63□□□□□ -0.23
CCDC60-201ENST00000327554 NOVP48745 357 aa13.63□□□□□ -0.23
CCDC60-201ENST00000327554 ACSBG2Q5FVE4 666 aa13.63□□□□□ -0.23
CCDC60-201ENST00000327554 RBM26Q5T8P6 1007 aaKnown RBP13.63□□□□□ -0.23
CCDC60-201ENST00000327554 LRRC74BQ6ZQY2 392 aa13.63□□□□□ -0.23
CCDC60-201ENST00000327554 ZC3H18Q86VM9 953 aaKnown RBP13.63□□□□□ -0.23
CCDC60-201ENST00000327554 CATSPER3Q86XQ3 398 aa13.63□□□□□ -0.23
CCDC60-201ENST00000327554 CCDC125Q86Z20 511 aa13.63□□□□□ -0.23
CCDC60-201ENST00000327554 MORC4Q8TE76 937 aa13.63□□□□□ -0.23
CCDC60-201ENST00000327554 PTPRN2Q92932 1015 aa13.63□□□□□ -0.23
CCDC60-201ENST00000327554 RUSC1Q9BVN2 902 aa13.63□□□□□ -0.23
CCDC60-201ENST00000327554 PPP1R12CQ9BZL4 782 aa13.63□□□□□ -0.23
CCDC60-201ENST00000327554 FAM192AQ9GZU8 254 aa13.63□□□□□ -0.23
CCDC60-201ENST00000327554 DMAP1Q9NPF5 467 aaPredicted RBP13.63□□□□□ -0.23
CCDC60-201ENST00000327554 SAR1AQ9NR31 198 aa13.63□□□□□ -0.23
CCDC60-201ENST00000327554 TULP1O00294 542 aaPredicted RBP13.63□□□□□ -0.23
CCDC60-201ENST00000327554 PLSCR1O15162 318 aa13.63□□□□□ -0.23
CCDC60-201ENST00000327554 LRRN2O75325 713 aa13.63□□□□□ -0.23
CCDC60-201ENST00000327554 CDR2Q01850 454 aa13.63□□□□□ -0.23
CCDC60-201ENST00000327554 PTK6Q13882 451 aa13.63□□□□□ -0.23
CCDC60-201ENST00000327554 TMED2Q15363 201 aa13.63□□□□□ -0.23
CCDC60-201ENST00000327554 PDK4Q16654 411 aa13.63□□□□□ -0.23
CCDC60-201ENST00000327554 SLC45A4Q5BKX6 768 aa13.63□□□□□ -0.23
CCDC60-201ENST00000327554 BICDL1Q6ZP65 573 aa13.63□□□□□ -0.23
CCDC60-201ENST00000327554 C16orf86Q6ZW13 317 aa13.63□□□□□ -0.23
Retrieved 100 of 20,778 RNA–protein pairs in 17.5 ms