RNA–Protein interactions for RNA: ENST00000325404.2

SOX2-201, Transcript of SRY-box 2, humanhuman

APPRIS P1 BASIC

Gene SOX2, Length 2,513 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SOX2-201ENST00000325404 SGPL1O95470 568 aa21.34■■□□□ 1.01
SOX2-201ENST00000325404 SHBGP04278 402 aa21.34■■□□□ 1.01
SOX2-201ENST00000325404 COILP38432 576 aaPredicted RBP21.34■■□□□ 1.01
SOX2-201ENST00000325404 TTC27Q6P3X3 843 aa21.34■■□□□ 1.01
SOX2-201ENST00000325404 CPLX4Q7Z7G2 160 aa21.34■■□□□ 1.01
SOX2-201ENST00000325404 MCF2L2Q86YR7 1114 aa21.34■■□□□ 1.01
SOX2-201ENST00000325404 PLEKHO2Q8TD55 490 aa21.34■■□□□ 1.01
SOX2-201ENST00000325404 ZNF341Q9BYN7 854 aa21.34■■□□□ 1.01
SOX2-201ENST00000325404 ROPN1BQ9BZX4 212 aaPredicted RBP21.34■■□□□ 1.01
SOX2-201ENST00000325404 KDM4CQ9H3R0 1056 aa21.34■■□□□ 1.01
SOX2-201ENST00000325404 ROPN1Q9HAT0 212 aaPredicted RBP21.34■■□□□ 1.01
SOX2-201ENST00000325404 AGO4Q9HCK5 861 aaKnown RBP21.34■■□□□ 1.01
SOX2-201ENST00000325404 TBC1D22BQ9NU19 505 aa21.34■■□□□ 1.01
SOX2-201ENST00000325404 GINM1Q9NU53 330 aa21.34■■□□□ 1.01
SOX2-201ENST00000325404 ASAP2O43150 1006 aa21.33■■□□□ 1.01
SOX2-201ENST00000325404 MESDQ14696 234 aa21.33■■□□□ 1.01
SOX2-201ENST00000325404 PCNX4Q63HM2 1172 aa21.33■■□□□ 1.01
SOX2-201ENST00000325404 C4orf19Q8IY42 314 aa21.33■■□□□ 1.01
SOX2-201ENST00000325404 ZDHHC14Q8IZN3 488 aa21.33■■□□□ 1.01
SOX2-201ENST00000325404 ZNF317Q96PQ6 595 aaPredicted RBP21.33■■□□□ 1.01
SOX2-201ENST00000325404 LRRC19Q9H756 370 aa21.33■■□□□ 1.01
SOX2-201ENST00000325404 PNMA2Q9UL42 364 aa21.33■■□□□ 1.01
SOX2-201ENST00000325404 PASKQ96RG2 1323 aa21.33■■□□□ 1.01
SOX2-201ENST00000325404 RGS16O15492 202 aaPredicted RBP21.33■■□□□ 1
SOX2-201ENST00000325404 GTF2H1P32780 548 aa21.33■■□□□ 1
SOX2-201ENST00000325404 MARCKSL1P49006 195 aa21.33■■□□□ 1
SOX2-201ENST00000325404 GPC3P51654 580 aa21.33■■□□□ 1
SOX2-201ENST00000325404 MFSD5Q6N075 450 aa21.33■■□□□ 1
SOX2-201ENST00000325404 ZNF564Q8TBZ8 553 aaPredicted RBP21.33■■□□□ 1
SOX2-201ENST00000325404 KREMEN1Q96MU8 473 aa21.33■■□□□ 1
SOX2-201ENST00000325404 PLVAPQ9BX97 442 aa21.33■■□□□ 1
SOX2-201ENST00000325404 OSBPL7Q9BZF2 842 aa21.33■■□□□ 1
SOX2-201ENST00000325404 PYGMP11217 842 aa21.32■■□□□ 1
SOX2-201ENST00000325404 FMO1Q01740 532 aa21.32■■□□□ 1
SOX2-201ENST00000325404 SLC29A2Q14542 456 aa21.32■■□□□ 1
SOX2-201ENST00000325404 SIX1Q15475 284 aaPredicted RBP21.32■■□□□ 1
SOX2-201ENST00000325404 TKFCQ3LXA3 575 aa21.32■■□□□ 1
SOX2-201ENST00000325404 ANKRD20A8PQ5CZ79 823 aa21.32■■□□□ 1
SOX2-201ENST00000325404 LRRC4CQ9HCJ2 640 aa21.32■■□□□ 1
SOX2-201ENST00000325404 CTNND1O60716 968 aaKnown RBP21.32■■□□□ 1
SOX2-201ENST00000325404 RWDD2BP57060 319 aa21.32■■□□□ 1
SOX2-201ENST00000325404 CDR2Q01850 454 aa21.32■■□□□ 1
SOX2-201ENST00000325404 KRT39Q6A163 491 aa21.32■■□□□ 1
SOX2-201ENST00000325404 AADACL2Q6P093 401 aa21.32■■□□□ 1
SOX2-201ENST00000325404 TRMT10CQ7L0Y3 403 aaKnown RBP21.32■■□□□ 1
SOX2-201ENST00000325404 TMC2Q8TDI7 906 aa21.32■■□□□ 1
SOX2-201ENST00000325404 ADAM7Q9H2U9 754 aa21.32■■□□□ 1
SOX2-201ENST00000325404 YY1AP1Q9H869 796 aa21.32■■□□□ 1
SOX2-201ENST00000325404 SPON1Q9HCB6 807 aa21.32■■□□□ 1
SOX2-201ENST00000325404 ZNF568Q3ZCX4 644 aa21.31■■□□□ 1
SOX2-201ENST00000325404 ATXN2LQ8WWM7 1075 aaKnown RBP21.31■■□□□ 1
SOX2-201ENST00000325404 NUP85Q9BW27 656 aa21.31■■□□□ 1
SOX2-201ENST00000325404 TMEM8AQ9HCN3 771 aa21.31■■□□□ 1
SOX2-201ENST00000325404 ANKEF1Q9NU02 776 aa21.31■■□□□ 1
SOX2-201ENST00000325404 TISP43B9A030 160 aa21.31■■□□□ 1
SOX2-201ENST00000325404 YWHABP31946 246 aaKnown RBP21.31■■□□□ 1
SOX2-201ENST00000325404 SYDE1Q6ZW31 735 aaPredicted RBP21.31■■□□□ 1
SOX2-201ENST00000325404 KIFAP3Q92845 792 aa21.31■■□□□ 1
SOX2-201ENST00000325404 FAM81BQ96LP2 452 aa21.31■■□□□ 1
SOX2-201ENST00000325404 SEMA4AQ9H3S1 761 aa21.31■■□□□ 1
SOX2-201ENST00000325404 WHRNQ9P202 907 aa21.31■■□□□ 1
SOX2-201ENST00000325404 CCPG1Q9ULG6 757 aa21.31■■□□□ 1
SOX2-201ENST00000325404 FSCN2O14926 492 aa21.3■■□□□ 1
SOX2-201ENST00000325404 RIPK2O43353 540 aa21.3■■□□□ 1
SOX2-201ENST00000325404 CHN1P15882 459 aa21.3■■□□□ 1
SOX2-201ENST00000325404 ITIH4Q14624 930 aa21.3■■□□□ 1
SOX2-201ENST00000325404 DCAF15Q66K64 600 aa21.3■■□□□ 1
SOX2-201ENST00000325404 MAIP1Q8WWC4 291 aa21.3■■□□□ 1
SOX2-201ENST00000325404 CLEC4DQ8WXI8 215 aa21.3■■□□□ 1
SOX2-201ENST00000325404 CCT6BQ92526 530 aa21.3■■□□□ 1
SOX2-201ENST00000325404 CCDC114Q96M63 670 aa21.3■■□□□ 1
SOX2-201ENST00000325404 TMEM110-MUSTN1A8MSY1 372 aa21.3■■□□□ 1
SOX2-201ENST00000325404 DDX39AO00148 427 aaKnown RBP21.3■■□□□ 1
SOX2-201ENST00000325404 CYP26A1O43174 497 aa21.3■■□□□ 1
SOX2-201ENST00000325404 SPOPO43791 374 aa21.3■■□□□ 1
SOX2-201ENST00000325404 RARAP10276 462 aa21.3■■□□□ 1
SOX2-201ENST00000325404 CYP11B1P15538 503 aa21.3■■□□□ 1
SOX2-201ENST00000325404 NBPF12Q5TAG4 269 aaPredicted RBP21.3■■□□□ 1
SOX2-201ENST00000325404 ZNF746Q6NUN9 644 aaPredicted RBP21.3■■□□□ 1
SOX2-201ENST00000325404 SAMD1Q6SPF0 538 aaPredicted RBP21.3■■□□□ 1
SOX2-201ENST00000325404 PIGWQ7Z7B1 504 aa21.3■■□□□ 1
SOX2-201ENST00000325404 USP37Q86T82 979 aa21.3■■□□□ 1
SOX2-201ENST00000325404 APOBEC3FQ8IUX4 373 aaKnown RBP21.3■■□□□ 1
SOX2-201ENST00000325404 CCDC105Q8IYK2 499 aa21.3■■□□□ 1
SOX2-201ENST00000325404 HELQQ8TDG4 1101 aa21.3■■□□□ 1
SOX2-201ENST00000325404 KAT5Q92993 513 aa21.3■■□□□ 1
SOX2-201ENST00000325404 KLC4Q9NSK0 619 aa21.3■■□□□ 1
SOX2-201ENST00000325404 ADRB2P07550 413 aa21.29■■□□□ 1
SOX2-201ENST00000325404 MMEP08473 750 aa21.29■■□□□ 1
SOX2-201ENST00000325404 MAN1A1P33908 653 aa21.29■■□□□ 1
SOX2-201ENST00000325404 SNRNP35Q16560 246 aaKnown RBP21.29■■□□□ 1
SOX2-201ENST00000325404 ACAD10Q6JQN1 1059 aa21.29■■□□□ 1
SOX2-201ENST00000325404 ENOSF1Q7L5Y1 443 aa21.29■■□□□ 1
SOX2-201ENST00000325404 MAEAQ7L5Y9 396 aa21.29■■□□□ 1
SOX2-201ENST00000325404 SLC47A2Q86VL8 602 aa21.29■■□□□ 1
SOX2-201ENST00000325404 MAP4K3Q8IVH8 894 aa21.29■■□□□ 1
SOX2-201ENST00000325404 CCDC197Q8NCU1 140 aa21.29■■□□□ 1
SOX2-201ENST00000325404 MDM1Q8TC05 714 aa21.29■■□□□ 1
SOX2-201ENST00000325404 PARD3BQ8TEW8 1205 aa21.29■■□□□ 1
SOX2-201ENST00000325404 PSPC1Q8WXF1 523 aaKnown RBP21.29■■□□□ 1
Retrieved 100 of 20,778 RNA–protein pairs in 8 ms