RNA–Protein interactions for RNA: ENST00000324938.9

LIMS2-201, Transcript of LIM zinc finger domain containing 2, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene LIMS2, Length 2,111 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LIMS2-201ENST00000324938 MAFBQ9Y5Q3 323 aaPredicted RBP23.04■■□□□ 1.28
LIMS2-201ENST00000324938 LRRC37A2A6NM11 1700 aa23.04■■□□□ 1.28
LIMS2-201ENST00000324938 GOLGA6L10A0A0M3HER8 536 aa23.03■■□□□ 1.28
LIMS2-201ENST00000324938 KRT14P02533 472 aa23.03■■□□□ 1.28
LIMS2-201ENST00000324938 CYP1A2P05177 515 aa23.03■■□□□ 1.28
LIMS2-201ENST00000324938 POLGP54098 1239 aaPredicted RBP23.03■■□□□ 1.28
LIMS2-201ENST00000324938 GCNT1Q02742 428 aa23.03■■□□□ 1.28
LIMS2-201ENST00000324938 LRRC31Q6UY01 552 aa23.03■■□□□ 1.28
LIMS2-201ENST00000324938 ENOSF1Q7L5Y1 443 aa23.03■■□□□ 1.28
LIMS2-201ENST00000324938 DDX1Q92499 740 aaKnown RBP23.03■■□□□ 1.28
LIMS2-201ENST00000324938 LRRC45Q96CN5 670 aa23.03■■□□□ 1.28
LIMS2-201ENST00000324938 ZSWIM1Q9BR11 485 aa23.03■■□□□ 1.28
LIMS2-201ENST00000324938 NEUROG2Q9H2A3 272 aa23.03■■□□□ 1.28
LIMS2-201ENST00000324938 KIAA1586Q9HCI6 787 aa23.03■■□□□ 1.28
LIMS2-201ENST00000324938 GTF3C4Q9UKN8 822 aa23.03■■□□□ 1.28
LIMS2-201ENST00000324938 EXTL3O43909 919 aa23.03■■□□□ 1.28
LIMS2-201ENST00000324938 ATP4AP20648 1035 aa23.03■■□□□ 1.28
LIMS2-201ENST00000324938 SCP2P22307 547 aa23.03■■□□□ 1.28
LIMS2-201ENST00000324938 ZNF211Q13398 564 aaPredicted RBP23.03■■□□□ 1.28
LIMS2-201ENST00000324938 PROCA1Q8NCQ7 364 aaPredicted RBP23.03■■□□□ 1.28
LIMS2-201ENST00000324938 ZNF526Q8TF50 670 aaPredicted RBP23.03■■□□□ 1.28
LIMS2-201ENST00000324938 ZNF302Q9NR11 478 aa23.03■■□□□ 1.28
LIMS2-201ENST00000324938 FAM114A2Q9NRY5 505 aa23.03■■□□□ 1.28
LIMS2-201ENST00000324938 TULP1O00294 542 aaPredicted RBP23.02■■□□□ 1.28
LIMS2-201ENST00000324938 OATP04181 439 aa23.02■■□□□ 1.28
LIMS2-201ENST00000324938 LIG4P49917 911 aa23.02■■□□□ 1.28
LIMS2-201ENST00000324938 HIRAP54198 1017 aaPredicted RBP23.02■■□□□ 1.28
LIMS2-201ENST00000324938 CLDN10P78369 228 aa23.02■■□□□ 1.28
LIMS2-201ENST00000324938 NAA35Q5VZE5 725 aa23.02■■□□□ 1.28
LIMS2-201ENST00000324938 CYFIP1Q7L576 1253 aa23.02■■□□□ 1.28
LIMS2-201ENST00000324938 C1orf131Q8NDD1 294 aaKnown RBP23.02■■□□□ 1.28
LIMS2-201ENST00000324938 TATDN2Q93075 761 aa23.02■■□□□ 1.28
LIMS2-201ENST00000324938 FAM81BQ96LP2 452 aa23.02■■□□□ 1.28
LIMS2-201ENST00000324938 CELF4Q9BZC1 486 aaKnown RBP23.02■■□□□ 1.28
LIMS2-201ENST00000324938 UTP11Q9Y3A2 253 aaKnown RBP23.02■■□□□ 1.28
LIMS2-201ENST00000324938 STYXL1Q9Y6J8 313 aa23.02■■□□□ 1.28
LIMS2-201ENST00000324938 KIAA0391O15091 583 aaKnown RBP23.02■■□□□ 1.28
LIMS2-201ENST00000324938 DAPK3O43293 454 aa23.02■■□□□ 1.28
LIMS2-201ENST00000324938 ATMINO43313 823 aaPredicted RBP23.02■■□□□ 1.28
LIMS2-201ENST00000324938 ZNF564Q8TBZ8 553 aaPredicted RBP23.02■■□□□ 1.28
LIMS2-201ENST00000324938 DHX38Q92620 1227 aaKnown RBP23.02■■□□□ 1.28
LIMS2-201ENST00000324938 KRT35Q92764 455 aa23.02■■□□□ 1.28
LIMS2-201ENST00000324938 WNT8AQ9H1J5 351 aa23.02■■□□□ 1.28
LIMS2-201ENST00000324938 DHX33Q9H6R0 707 aaKnown RBP23.02■■□□□ 1.28
LIMS2-201ENST00000324938 TRPC6Q9Y210 931 aa23.02■■□□□ 1.28
LIMS2-201ENST00000324938 TMEM110-MUSTN1A8MSY1 372 aa23.01■■□□□ 1.27
LIMS2-201ENST00000324938 USP2O75604 605 aaPredicted RBP23.01■■□□□ 1.27
LIMS2-201ENST00000324938 HSPA6P17066 643 aa23.01■■□□□ 1.27
LIMS2-201ENST00000324938 COMTP21964 271 aa23.01■■□□□ 1.27
LIMS2-201ENST00000324938 MESDQ14696 234 aa23.01■■□□□ 1.27
LIMS2-201ENST00000324938 PSMD6Q15008 389 aa23.01■■□□□ 1.27
LIMS2-201ENST00000324938 LRIG3Q6UXM1 1119 aa23.01■■□□□ 1.27
LIMS2-201ENST00000324938 CD101Q93033 1021 aa23.01■■□□□ 1.27
LIMS2-201ENST00000324938 ZNF653Q96CK0 615 aa23.01■■□□□ 1.27
LIMS2-201ENST00000324938 NUP85Q9BW27 656 aa23.01■■□□□ 1.27
LIMS2-201ENST00000324938 RAB17Q9H0T7 212 aa23.01■■□□□ 1.27
LIMS2-201ENST00000324938 PORCNQ9H237 461 aa23.01■■□□□ 1.27
LIMS2-201ENST00000324938 ERVK-5Q9HDB9 667 aa23.01■■□□□ 1.27
LIMS2-201ENST00000324938 UVRAGQ9P2Y5 699 aa23.01■■□□□ 1.27
LIMS2-201ENST00000324938 PLAAQ9Y263 795 aa23.01■■□□□ 1.27
LIMS2-201ENST00000324938 SNCAIPQ9Y6H5 919 aa23.01■■□□□ 1.27
LIMS2-201ENST00000324938 PIGRP01833 764 aa23■■□□□ 1.27
LIMS2-201ENST00000324938 HSD17B3P37058 310 aa23■■□□□ 1.27
LIMS2-201ENST00000324938 MARCKSL1P49006 195 aa23■■□□□ 1.27
LIMS2-201ENST00000324938 PEX5P50542 639 aa23■■□□□ 1.27
LIMS2-201ENST00000324938 ALDH5A1P51649 535 aaPredicted RBP23■■□□□ 1.27
LIMS2-201ENST00000324938 SKOR1P84550 965 aa23■■□□□ 1.27
LIMS2-201ENST00000324938 CNTN2Q02246 1040 aa23■■□□□ 1.27
LIMS2-201ENST00000324938 STRN3Q13033 797 aa23■■□□□ 1.27
LIMS2-201ENST00000324938 LBX2Q6XYB7 198 aa23■■□□□ 1.27
LIMS2-201ENST00000324938 GPC2Q8N158 579 aa23■■□□□ 1.27
LIMS2-201ENST00000324938 ANKRD35Q8N283 1001 aa23■■□□□ 1.27
LIMS2-201ENST00000324938 PSPC1Q8WXF1 523 aaKnown RBP23■■□□□ 1.27
LIMS2-201ENST00000324938 ZNF516Q92618 1163 aa23■■□□□ 1.27
LIMS2-201ENST00000324938 C1orf112Q9NSG2 853 aa23■■□□□ 1.27
LIMS2-201ENST00000324938 SLTMQ9NWH9 1034 aaKnown RBP eCLIP23■■□□□ 1.27
LIMS2-201ENST00000324938 IGKV6D-21A0A0A0MT36 114 aa23■■□□□ 1.27
LIMS2-201ENST00000324938 NAMPTP43490 491 aa23■■□□□ 1.27
LIMS2-201ENST00000324938 FSTL1Q12841 308 aa23■■□□□ 1.27
LIMS2-201ENST00000324938 ASAP3Q8TDY4 903 aa23■■□□□ 1.27
LIMS2-201ENST00000324938 GRIN3BO60391 1043 aa22.99■■□□□ 1.27
LIMS2-201ENST00000324938 GLRA2P23416 452 aa22.99■■□□□ 1.27
LIMS2-201ENST00000324938 DR1Q01658 176 aa22.99■■□□□ 1.27
LIMS2-201ENST00000324938 PRKG1Q13976 671 aa22.99■■□□□ 1.27
LIMS2-201ENST00000324938 VGLL4Q14135 290 aa22.99■■□□□ 1.27
LIMS2-201ENST00000324938 DHX34Q14147 1143 aaKnown RBP22.99■■□□□ 1.27
LIMS2-201ENST00000324938 UAP1Q16222 522 aaPredicted RBP22.99■■□□□ 1.27
LIMS2-201ENST00000324938 ACAD10Q6JQN1 1059 aa22.99■■□□□ 1.27
LIMS2-201ENST00000324938 TMEM143Q96AN5 459 aa22.99■■□□□ 1.27
LIMS2-201ENST00000324938 TRIM51Q9BSJ1 452 aa22.99■■□□□ 1.27
LIMS2-201ENST00000324938 PI4K2AQ9BTU6 479 aa22.99■■□□□ 1.27
LIMS2-201ENST00000324938 CAPS2Q9BXY5 557 aa22.99■■□□□ 1.27
LIMS2-201ENST00000324938 NIFKQ9BYG3 293 aaKnown RBP22.99■■□□□ 1.27
LIMS2-201ENST00000324938 FBXO40Q9UH90 709 aa22.99■■□□□ 1.27
LIMS2-201ENST00000324938 CHORDC1Q9UHD1 332 aaPredicted RBP22.99■■□□□ 1.27
LIMS2-201ENST00000324938 FAM187AA6NFU0 413 aa22.99■■□□□ 1.27
LIMS2-201ENST00000324938 GGPS1O95749 300 aa22.99■■□□□ 1.27
LIMS2-201ENST00000324938 ARL2P36404 184 aa22.99■■□□□ 1.27
LIMS2-201ENST00000324938 MTMR3Q13615 1198 aa22.99■■□□□ 1.27
LIMS2-201ENST00000324938 CLEC16AQ2KHT3 1053 aa22.99■■□□□ 1.27
Retrieved 100 of 20,778 RNA–protein pairs in 18.3 ms