RNA–Protein interactions for RNA: ENST00000322344.7

PNKP-201, Transcript of polynucleotide kinase 3'-phosphatase, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene PNKP, Length 2,041 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PNKP-201ENST00000322344 SWSAP1Q6NVH7 229 aa24.03■■□□□ 1.44
PNKP-201ENST00000322344 CD101Q93033 1021 aa24.03■■□□□ 1.44
PNKP-201ENST00000322344 ERVK-5Q9HDB9 667 aa24.03■■□□□ 1.44
PNKP-201ENST00000322344 ZNF214Q9UL59 606 aaPredicted RBP24.03■■□□□ 1.44
PNKP-201ENST00000322344 EBAG9O00559 213 aa24.02■■□□□ 1.44
PNKP-201ENST00000322344 HNRNPDLO14979 420 aaKnown RBP24.02■■□□□ 1.44
PNKP-201ENST00000322344 PPFIA2O75334 1257 aa24.02■■□□□ 1.44
PNKP-201ENST00000322344 DHX9Q08211 1270 aaKnown RBP24.02■■□□□ 1.44
PNKP-201ENST00000322344 SV2AQ7L0J3 742 aa24.02■■□□□ 1.44
PNKP-201ENST00000322344 JAMLQ86YT9 394 aa24.02■■□□□ 1.44
PNKP-201ENST00000322344 KRT35Q92764 455 aa24.02■■□□□ 1.44
PNKP-201ENST00000322344 ZNF653Q96CK0 615 aa24.02■■□□□ 1.44
PNKP-201ENST00000322344 NUP85Q9BW27 656 aa24.02■■□□□ 1.44
PNKP-201ENST00000322344 PCYOX1Q9UHG3 505 aa24.02■■□□□ 1.44
PNKP-201ENST00000322344 CNOT7Q9UIV1 285 aaKnown RBP24.02■■□□□ 1.44
PNKP-201ENST00000322344 FLT3P36888 993 aa24.01■■□□□ 1.43
PNKP-201ENST00000322344 EIF3BP55884 814 aaKnown RBP24.01■■□□□ 1.43
PNKP-201ENST00000322344 POP1Q99575 1024 aaKnown RBP24.01■■□□□ 1.43
PNKP-201ENST00000322344 ACAD9Q9H845 621 aa24.01■■□□□ 1.43
PNKP-201ENST00000322344 CYP26B1Q9NR63 512 aa24.01■■□□□ 1.43
PNKP-201ENST00000322344 ARHGAP28Q9P2N2 729 aa24.01■■□□□ 1.43
PNKP-201ENST00000322344 SEPT9Q9UHD8 586 aaPredicted RBP24.01■■□□□ 1.43
PNKP-201ENST00000322344 PHIPQ8WWQ0 1821 aa24.01■■□□□ 1.43
PNKP-201ENST00000322344 PODXLO00592 558 aa24.01■■□□□ 1.43
PNKP-201ENST00000322344 KIAA0391O15091 583 aaKnown RBP24.01■■□□□ 1.43
PNKP-201ENST00000322344 RGS20O76081 388 aa24.01■■□□□ 1.43
PNKP-201ENST00000322344 CCT5P48643 541 aa24.01■■□□□ 1.43
PNKP-201ENST00000322344 IRX5P78411 483 aaPredicted RBP24.01■■□□□ 1.43
PNKP-201ENST00000322344 PRKCEQ02156 737 aa24.01■■□□□ 1.43
PNKP-201ENST00000322344 ACAD10Q6JQN1 1059 aa24.01■■□□□ 1.43
PNKP-201ENST00000322344 MIS18BP1Q6P0N0 1132 aa24.01■■□□□ 1.43
PNKP-201ENST00000322344 ABHD15Q6UXT9 468 aa24.01■■□□□ 1.43
PNKP-201ENST00000322344 ADAT2Q7Z6V5 191 aaKnown RBP24.01■■□□□ 1.43
PNKP-201ENST00000322344 KCNN1Q92952 543 aa24.01■■□□□ 1.43
PNKP-201ENST00000322344 BICD1Q96G01 975 aa24.01■■□□□ 1.43
PNKP-201ENST00000322344 WRNIP1Q96S55 665 aa24.01■■□□□ 1.43
PNKP-201ENST00000322344 TEX13BQ9BXU2 312 aa24.01■■□□□ 1.43
PNKP-201ENST00000322344 TXLNGYQ9BZA5 131 aa24.01■■□□□ 1.43
PNKP-201ENST00000322344 XPNPEP1Q9NQW7 623 aa24.01■■□□□ 1.43
PNKP-201ENST00000322344 TOPORSQ9NS56 1045 aaPredicted RBP24.01■■□□□ 1.43
PNKP-201ENST00000322344 MTUS1Q9ULD2 1270 aa24.01■■□□□ 1.43
PNKP-201ENST00000322344 PCDHA3Q9Y5H8 950 aa24.01■■□□□ 1.43
PNKP-201ENST00000322344 SPATA31C2B4DYI2 1134 aa24■■□□□ 1.43
PNKP-201ENST00000322344 MDH1P40925 334 aaKnown RBP24■■□□□ 1.43
PNKP-201ENST00000322344 ACTR2P61160 394 aa24■■□□□ 1.43
PNKP-201ENST00000322344 XKR3Q5GH77 459 aa24■■□□□ 1.43
PNKP-201ENST00000322344 DDX1Q92499 740 aaKnown RBP24■■□□□ 1.43
PNKP-201ENST00000322344 UTP3Q9NQZ2 479 aaKnown RBP eCLIP24■■□□□ 1.432e-7■■■■■ 93.2
PNKP-201ENST00000322344 ZDHHC18Q9NUE0 388 aa24■■□□□ 1.43
PNKP-201ENST00000322344 CYP39A1Q9NYL5 469 aa24■■□□□ 1.43
PNKP-201ENST00000322344 PARP2Q9UGN5 583 aa24■■□□□ 1.43
PNKP-201ENST00000322344 FEZ2Q9UHY8 353 aaPredicted RBP24■■□□□ 1.43
PNKP-201ENST00000322344 ADGRA3Q8IWK6 1321 aa24■■□□□ 1.43
PNKP-201ENST00000322344 ARID2Q68CP9 1835 aa24■■□□□ 1.43
PNKP-201ENST00000322344 SPOPO43791 374 aa24■■□□□ 1.43
PNKP-201ENST00000322344 PTGIRP43119 386 aa24■■□□□ 1.43
PNKP-201ENST00000322344 CORO7P57737 925 aa24■■□□□ 1.43
PNKP-201ENST00000322344 TMEM132BQ14DG7 1078 aa24■■□□□ 1.43
PNKP-201ENST00000322344 TTC19Q6DKK2 380 aaPredicted RBP24■■□□□ 1.43
PNKP-201ENST00000322344 PRELID2Q8N945 189 aa24■■□□□ 1.43
PNKP-201ENST00000322344 TRIM31Q9BZY9 425 aa24■■□□□ 1.43
PNKP-201ENST00000322344 POLR3FQ9H1D9 316 aaPredicted RBP24■■□□□ 1.43
PNKP-201ENST00000322344 EPN3Q9H201 632 aa24■■□□□ 1.43
PNKP-201ENST00000322344 FAM170AA1A519 330 aa23.99■■□□□ 1.43
PNKP-201ENST00000322344 MYO1FO00160 1098 aa23.99■■□□□ 1.43
PNKP-201ENST00000322344 EXTL3O43909 919 aa23.99■■□□□ 1.43
PNKP-201ENST00000322344 DLATP10515 647 aaKnown RBP23.99■■□□□ 1.43
PNKP-201ENST00000322344 LSP1P33241 339 aa23.99■■□□□ 1.43
PNKP-201ENST00000322344 MARCKSL1P49006 195 aa23.99■■□□□ 1.43
PNKP-201ENST00000322344 HMGCS2P54868 508 aa23.99■■□□□ 1.43
PNKP-201ENST00000322344 SOX10P56693 466 aa23.99■■□□□ 1.43
PNKP-201ENST00000322344 CYP1B1Q16678 543 aa23.99■■□□□ 1.43
PNKP-201ENST00000322344 CLEC16AQ2KHT3 1053 aa23.99■■□□□ 1.43
PNKP-201ENST00000322344 ZNF677Q86XU0 584 aa23.99■■□□□ 1.43
PNKP-201ENST00000322344 APOBEC3FQ8IUX4 373 aaKnown RBP23.99■■□□□ 1.43
PNKP-201ENST00000322344 CCDC60Q8IWA6 550 aaPredicted RBP23.99■■□□□ 1.43
PNKP-201ENST00000322344 OR2W6PQ8NHA6 318 aa23.99■■□□□ 1.43
PNKP-201ENST00000322344 ZKSCAN4Q969J2 545 aaPredicted RBP23.99■■□□□ 1.43
PNKP-201ENST00000322344 MAGOHBQ96A72 148 aaKnown RBP23.99■■□□□ 1.43
PNKP-201ENST00000322344 RASSF4Q9H2L5 321 aa23.99■■□□□ 1.43
PNKP-201ENST00000322344 C1orf112Q9NSG2 853 aa23.99■■□□□ 1.43
PNKP-201ENST00000322344 RLFQ13129 1914 aa23.98■■□□□ 1.43
PNKP-201ENST00000322344 ATMINO43313 823 aaPredicted RBP23.98■■□□□ 1.43
PNKP-201ENST00000322344 SUPT20HL2P0C7V6 817 aa23.98■■□□□ 1.43
PNKP-201ENST00000322344 SUPT20HL1Q3ZLR7 823 aa23.98■■□□□ 1.43
PNKP-201ENST00000322344 CATSPERGQ6ZRH7 1159 aa23.98■■□□□ 1.43
PNKP-201ENST00000322344 C15orf39Q6ZRI6 1047 aa23.98■■□□□ 1.43
PNKP-201ENST00000322344 FAM213AQ9BRX8 229 aa23.98■■□□□ 1.43
PNKP-201ENST00000322344 PLVAPQ9BX97 442 aa23.98■■□□□ 1.43
PNKP-201ENST00000322344 ACP6Q9NPH0 428 aa23.98■■□□□ 1.43
PNKP-201ENST00000322344 MYPNQ86TC9 1320 aa23.98■■□□□ 1.43
PNKP-201ENST00000322344 TULP1O00294 542 aaPredicted RBP23.98■■□□□ 1.43
PNKP-201ENST00000322344 NDUFAB1O14561 156 aa23.98■■□□□ 1.43
PNKP-201ENST00000322344 COPB2P35606 906 aa23.98■■□□□ 1.43
PNKP-201ENST00000322344 RWDD2BP57060 319 aa23.98■■□□□ 1.43
PNKP-201ENST00000322344 CLDN10P78369 228 aa23.98■■□□□ 1.43
PNKP-201ENST00000322344 SLC13A5Q86YT5 568 aaPredicted RBP23.98■■□□□ 1.43
PNKP-201ENST00000322344 GLG1Q92896 1179 aa23.98■■□□□ 1.43
PNKP-201ENST00000322344 TATDN2Q93075 761 aa23.98■■□□□ 1.43
PNKP-201ENST00000322344 CENPHQ9H3R5 247 aa23.98■■□□□ 1.43
Retrieved 100 of 20,778 RNA–protein pairs in 20 ms