RNA–Protein interactions for RNA: ENST00000320755.11

COL9A1-201, Transcript of collagen type IX alpha 1 chain, humanhuman

TSL 1 (best) BASIC

Gene COL9A1, Length 3,059 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL9A1-201ENST00000320755 RAB20Q9NX57 234 aa18.69■□□□□ 0.58
COL9A1-201ENST00000320755 NCKAP1LP55160 1127 aa18.69■□□□□ 0.58
COL9A1-201ENST00000320755 TRIP13Q15645 432 aaPredicted RBP18.69■□□□□ 0.58
COL9A1-201ENST00000320755 AGBL2Q5U5Z8 902 aa18.69■□□□□ 0.58
COL9A1-201ENST00000320755 PRAMEF18Q5VWM3 479 aa18.69■□□□□ 0.58
COL9A1-201ENST00000320755 C12orf56Q8IXR9 622 aa18.69■□□□□ 0.58
COL9A1-201ENST00000320755 HELQQ8TDG4 1101 aa18.69■□□□□ 0.58
COL9A1-201ENST00000320755 PABPC3Q9H361 631 aaKnown RBP18.69■□□□□ 0.58
COL9A1-201ENST00000320755 MYOZ2Q9NPC6 264 aa18.69■□□□□ 0.58
COL9A1-201ENST00000320755 DNAJC17Q9NVM6 304 aaKnown RBP18.69■□□□□ 0.58
COL9A1-201ENST00000320755 GRHL1Q9NZI5 618 aa18.69■□□□□ 0.58
COL9A1-201ENST00000320755 ZNF646O15015 1829 aaPredicted RBP18.68■□□□□ 0.58
COL9A1-201ENST00000320755 IFI35P80217 286 aaPredicted RBP18.68■□□□□ 0.58
COL9A1-201ENST00000320755 PPP1R7Q15435 360 aa18.68■□□□□ 0.58
COL9A1-201ENST00000320755 MICALCLQ6ZW33 695 aa18.68■□□□□ 0.58
COL9A1-201ENST00000320755 NIPA1Q7RTP0 329 aa18.68■□□□□ 0.58
COL9A1-201ENST00000320755 CPA5Q8WXQ8 436 aa18.68■□□□□ 0.58
COL9A1-201ENST00000320755 EPB41L4BQ9H329 900 aa18.68■□□□□ 0.58
COL9A1-201ENST00000320755 AZI2Q9H6S1 392 aa18.68■□□□□ 0.58
COL9A1-201ENST00000320755 MTUS1Q9ULD2 1270 aa18.68■□□□□ 0.58
COL9A1-201ENST00000320755 COL4A5P29400 1685 aa18.68■□□□□ 0.58
COL9A1-201ENST00000320755 ZBED4O75132 1171 aa18.68■□□□□ 0.58
COL9A1-201ENST00000320755 GZMAP12544 262 aa18.68■□□□□ 0.58
COL9A1-201ENST00000320755 SLC39A4Q6P5W5 647 aa18.68■□□□□ 0.58
COL9A1-201ENST00000320755 CYFIP1Q7L576 1253 aa18.68■□□□□ 0.58
COL9A1-201ENST00000320755 CPLX4Q7Z7G2 160 aa18.68■□□□□ 0.58
COL9A1-201ENST00000320755 SLC13A5Q86YT5 568 aaPredicted RBP18.68■□□□□ 0.58
COL9A1-201ENST00000320755 RPS6KC1Q96S38 1066 aa18.68■□□□□ 0.58
COL9A1-201ENST00000320755 WNT8AQ9H1J5 351 aa18.68■□□□□ 0.58
COL9A1-201ENST00000320755 STK32BQ9NY57 414 aa18.68■□□□□ 0.58
COL9A1-201ENST00000320755 ANAPC7Q9UJX3 599 aa18.68■□□□□ 0.58
COL9A1-201ENST00000320755 ZNF862O60290 1169 aa18.68■□□□□ 0.58
COL9A1-201ENST00000320755 CDR2Q01850 454 aa18.68■□□□□ 0.58
COL9A1-201ENST00000320755 CCDC38Q502W7 563 aa18.68■□□□□ 0.58
COL9A1-201ENST00000320755 DEFB129Q9H1M3 183 aa18.68■□□□□ 0.58
COL9A1-201ENST00000320755 TMEM8AQ9HCN3 771 aa18.68■□□□□ 0.58
COL9A1-201ENST00000320755 RNF146Q9NTX7 359 aa18.68■□□□□ 0.58
COL9A1-201ENST00000320755 TRAPPC3O43617 180 aa18.67■□□□□ 0.58
COL9A1-201ENST00000320755 VPS41P49754 854 aa18.67■□□□□ 0.58
COL9A1-201ENST00000320755 FKBP1CQ5VVH2 108 aa18.67■□□□□ 0.58
COL9A1-201ENST00000320755 ATG4AQ8WYN0 398 aa18.67■□□□□ 0.58
COL9A1-201ENST00000320755 FAM118BQ9BPY3 351 aa18.67■□□□□ 0.58
COL9A1-201ENST00000320755 TXLNGYQ9BZA5 131 aa18.67■□□□□ 0.58
COL9A1-201ENST00000320755 MTRF1LQ9UGC7 380 aaKnown RBP18.67■□□□□ 0.58
COL9A1-201ENST00000320755 SEPT9Q9UHD8 586 aaPredicted RBP18.67■□□□□ 0.58
COL9A1-201ENST00000320755 DDX20Q9UHI6 824 aaKnown RBP18.67■□□□□ 0.58
COL9A1-201ENST00000320755 PCDHA10Q9Y5I2 948 aa18.67■□□□□ 0.58
COL9A1-201ENST00000320755 ADGRA3Q8IWK6 1321 aa18.67■□□□□ 0.58
COL9A1-201ENST00000320755 LYPLA2O95372 231 aa18.67■□□□□ 0.58
COL9A1-201ENST00000320755 COILP38432 576 aaPredicted RBP18.67■□□□□ 0.58
COL9A1-201ENST00000320755 JAK3P52333 1124 aa18.67■□□□□ 0.58
COL9A1-201ENST00000320755 HADHBP55084 474 aaKnown RBP18.67■□□□□ 0.58
COL9A1-201ENST00000320755 KRT76Q01546 638 aa18.67■□□□□ 0.58
COL9A1-201ENST00000320755 EPS8L3Q8TE67 593 aaKnown RBP18.67■□□□□ 0.58
COL9A1-201ENST00000320755 LPAR1Q92633 364 aa18.67■□□□□ 0.58
COL9A1-201ENST00000320755 PGAP2Q9UHJ9 254 aa18.67■□□□□ 0.58
COL9A1-201ENST00000320755 RGS16O15492 202 aaPredicted RBP18.66■□□□□ 0.58
COL9A1-201ENST00000320755 CTNND1O60716 968 aaKnown RBP18.66■□□□□ 0.58
COL9A1-201ENST00000320755 NR3C2P08235 984 aa18.66■□□□□ 0.58
COL9A1-201ENST00000320755 GJC1P36383 396 aa18.66■□□□□ 0.58
COL9A1-201ENST00000320755 RWDD2BP57060 319 aa18.66■□□□□ 0.58
COL9A1-201ENST00000320755 HOOK3Q86VS8 718 aa18.66■□□□□ 0.58
COL9A1-201ENST00000320755 MAP4K3Q8IVH8 894 aa18.66■□□□□ 0.58
COL9A1-201ENST00000320755 CABS1Q96KC9 395 aa18.66■□□□□ 0.58
COL9A1-201ENST00000320755 MOV10L1Q9BXT6 1211 aaKnown RBP18.66■□□□□ 0.58
COL9A1-201ENST00000320755 CTNNA2P26232 953 aa18.66■□□□□ 0.58
COL9A1-201ENST00000320755 MAPK4P31152 587 aa18.66■□□□□ 0.58
COL9A1-201ENST00000320755 EIF3BP55884 814 aaKnown RBP18.66■□□□□ 0.58
COL9A1-201ENST00000320755 KIFAP3Q92845 792 aa18.66■□□□□ 0.58
COL9A1-201ENST00000320755 VTI1AQ96AJ9 217 aa18.66■□□□□ 0.58
COL9A1-201ENST00000320755 TNNI1P19237 187 aa18.65■□□□□ 0.58
COL9A1-201ENST00000320755 ACOT2P49753 483 aa18.65■□□□□ 0.58
COL9A1-201ENST00000320755 SPOPLQ6IQ16 392 aa18.65■□□□□ 0.58
COL9A1-201ENST00000320755 SAMD7Q7Z3H4 446 aa18.65■□□□□ 0.58
COL9A1-201ENST00000320755 PASD1Q8IV76 773 aa18.65■□□□□ 0.58
COL9A1-201ENST00000320755 HEMGNQ9BXL5 484 aa18.65■□□□□ 0.58
COL9A1-201ENST00000320755 KIAA1683Q9H0B3 1180 aa18.65■□□□□ 0.58
COL9A1-201ENST00000320755 GTF3C4Q9UKN8 822 aa18.65■□□□□ 0.58
COL9A1-201ENST00000320755 PODXLO00592 558 aa18.65■□□□□ 0.58
COL9A1-201ENST00000320755 CYP1A2P05177 515 aa18.65■□□□□ 0.58
COL9A1-201ENST00000320755 SSR1P43307 286 aaKnown RBP18.65■□□□□ 0.58
COL9A1-201ENST00000320755 CYP24A1Q07973 514 aa18.65■□□□□ 0.58
COL9A1-201ENST00000320755 SGO2Q562F6 1265 aa18.65■□□□□ 0.58
COL9A1-201ENST00000320755 AGBL3Q8NEM8 1001 aa18.65■□□□□ 0.58
COL9A1-201ENST00000320755 CD101Q93033 1021 aa18.65■□□□□ 0.58
COL9A1-201ENST00000320755 CEP89Q96ST8 783 aa18.65■□□□□ 0.58
COL9A1-201ENST00000320755 ST6GALNAC4Q9H4F1 302 aa18.65■□□□□ 0.58
COL9A1-201ENST00000320755 ANKEF1Q9NU02 776 aa18.65■□□□□ 0.58
COL9A1-201ENST00000320755 PCYOX1Q9UHG3 505 aa18.65■□□□□ 0.58
COL9A1-201ENST00000320755 PCDHA3Q9Y5H8 950 aa18.65■□□□□ 0.58
COL9A1-201ENST00000320755 ACSL3O95573 720 aa18.65■□□□□ 0.58
COL9A1-201ENST00000320755 CHN1P15882 459 aa18.65■□□□□ 0.58
COL9A1-201ENST00000320755 HSPA6P17066 643 aa18.65■□□□□ 0.58
COL9A1-201ENST00000320755 SFNP31947 248 aa18.65■□□□□ 0.58
COL9A1-201ENST00000320755 IFNAR2P48551 515 aa18.65■□□□□ 0.58
COL9A1-201ENST00000320755 MTERF2Q49AM1 385 aa18.65■□□□□ 0.58
COL9A1-201ENST00000320755 OTUD6AQ7L8S5 288 aa18.65■□□□□ 0.58
COL9A1-201ENST00000320755 ZKSCAN4Q969J2 545 aaPredicted RBP18.65■□□□□ 0.58
COL9A1-201ENST00000320755 ASIC3Q9UHC3 531 aa18.65■□□□□ 0.58
COL9A1-201ENST00000320755 VWA5AO00534 786 aa18.64■□□□□ 0.57
Retrieved 100 of 20,778 RNA–protein pairs in 29.8 ms