RNA–Protein interactions for RNA: ENST00000319406.8

LCLAT1-202, Transcript of lysocardiolipin acyltransferase 1, humanhuman

TSL 2 BASIC

Gene LCLAT1, Length 2,774 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LCLAT1-202ENST00000319406 SLC30A9Q6PML9 568 aa10.91□□□□□ -0.66
LCLAT1-202ENST00000319406 PADI6Q6TGC4 694 aa10.91□□□□□ -0.66
LCLAT1-202ENST00000319406 HS2ST1Q7LGA3 356 aa10.91□□□□□ -0.66
LCLAT1-202ENST00000319406 SYTL5Q8TDW5 730 aaPredicted RBP10.91□□□□□ -0.66
LCLAT1-202ENST00000319406 LPAR1Q92633 364 aa10.91□□□□□ -0.66
LCLAT1-202ENST00000319406 ITFG2Q969R8 447 aa10.91□□□□□ -0.66
LCLAT1-202ENST00000319406 KIAA1683Q9H0B3 1180 aa10.91□□□□□ -0.66
LCLAT1-202ENST00000319406 DAAM1Q9Y4D1 1078 aa10.91□□□□□ -0.66
LCLAT1-202ENST00000319406 NCANO14594 1321 aa10.91□□□□□ -0.66
LCLAT1-202ENST00000319406 ARHGEF35A5YM69 484 aa10.9□□□□□ -0.66
LCLAT1-202ENST00000319406 SPDYE5A6NIY4 337 aa10.9□□□□□ -0.66
LCLAT1-202ENST00000319406 TTI1O43156 1089 aa10.9□□□□□ -0.66
LCLAT1-202ENST00000319406 TRIM49P0CI25 452 aa10.9□□□□□ -0.66
LCLAT1-202ENST00000319406 TRIM49CP0CI26 452 aa10.9□□□□□ -0.66
LCLAT1-202ENST00000319406 CTCFP49711 727 aaPredicted RBP10.9□□□□□ -0.66
LCLAT1-202ENST00000319406 PAPOLAP51003 745 aaKnown RBP10.9□□□□□ -0.66
LCLAT1-202ENST00000319406 CCNG1P51959 295 aa10.9□□□□□ -0.66
LCLAT1-202ENST00000319406 NPEPPSP55786 919 aa10.9□□□□□ -0.66
LCLAT1-202ENST00000319406 C1orf220Q5T0J3 134 aa10.9□□□□□ -0.66
LCLAT1-202ENST00000319406 UBAP2Q5T6F2 1119 aaKnown RBP10.9□□□□□ -0.66
LCLAT1-202ENST00000319406 STXBP4Q6ZWJ1 553 aa10.9□□□□□ -0.66
LCLAT1-202ENST00000319406 ACTRT1Q8TDG2 376 aa10.9□□□□□ -0.66
LCLAT1-202ENST00000319406 SELENOSQ9BQE4 189 aa10.9□□□□□ -0.66
LCLAT1-202ENST00000319406 OSBPL1AQ9BXW6 950 aa10.9□□□□□ -0.66
LCLAT1-202ENST00000319406 TXLNGYQ9BZA5 131 aa10.9□□□□□ -0.66
LCLAT1-202ENST00000319406 MYOZ2Q9NPC6 264 aa10.9□□□□□ -0.66
LCLAT1-202ENST00000319406 STK38LQ9Y2H1 464 aa10.9□□□□□ -0.66
LCLAT1-202ENST00000319406 ATP8A1Q9Y2Q0 1164 aa10.9□□□□□ -0.66
LCLAT1-202ENST00000319406 RTN3O95197 1032 aaPredicted RBP10.9□□□□□ -0.66
LCLAT1-202ENST00000319406 GNAT1P11488 350 aa10.9□□□□□ -0.66
LCLAT1-202ENST00000319406 DGKZQ13574 1117 aa10.9□□□□□ -0.66
LCLAT1-202ENST00000319406 DRAP1Q14919 205 aaPredicted RBP10.9□□□□□ -0.66
LCLAT1-202ENST00000319406 RPS6KA1Q15418 735 aa10.9□□□□□ -0.66
LCLAT1-202ENST00000319406 ANO7Q6IWH7 933 aa10.9□□□□□ -0.66
LCLAT1-202ENST00000319406 MIER3Q7Z3K6 550 aa10.9□□□□□ -0.66
LCLAT1-202ENST00000319406 NIM1KQ8IY84 436 aa10.9□□□□□ -0.66
LCLAT1-202ENST00000319406 RASGEF1CQ8N431 466 aa10.9□□□□□ -0.66
LCLAT1-202ENST00000319406 NAF1Q96HR8 494 aaKnown RBP10.9□□□□□ -0.66
LCLAT1-202ENST00000319406 INTS2Q9H0H0 1204 aaKnown RBP10.9□□□□□ -0.66
LCLAT1-202ENST00000319406 DPH5Q9H2P9 285 aa10.9□□□□□ -0.66
LCLAT1-202ENST00000319406 ST6GALNAC4Q9H4F1 302 aa10.9□□□□□ -0.66
LCLAT1-202ENST00000319406 PAPOLBQ9NRJ5 636 aaKnown RBP10.9□□□□□ -0.66
LCLAT1-202ENST00000319406 MAP3K20Q9NYL2 800 aaKnown RBP10.9□□□□□ -0.66
LCLAT1-202ENST00000319406 APEX2Q9UBZ4 518 aa10.9□□□□□ -0.66
LCLAT1-202ENST00000319406 DNAJC12Q9UKB3 198 aa10.9□□□□□ -0.66
LCLAT1-202ENST00000319406 PNMA3Q9UL41 463 aa10.9□□□□□ -0.66
LCLAT1-202ENST00000319406 RLFQ13129 1914 aa10.89□□□□□ -0.67
LCLAT1-202ENST00000319406 ASTN2O75129 1339 aaPredicted RBP10.89□□□□□ -0.67
LCLAT1-202ENST00000319406 DDX39AO00148 427 aaKnown RBP10.89□□□□□ -0.67
LCLAT1-202ENST00000319406 EGFRP00533 1210 aa10.89□□□□□ -0.67
LCLAT1-202ENST00000319406 VIMP08670 466 aaKnown RBP10.89□□□□□ -0.67
LCLAT1-202ENST00000319406 H2AFZP0C0S5 128 aa10.89□□□□□ -0.67
LCLAT1-202ENST00000319406 CYP2J2P51589 502 aa10.89□□□□□ -0.67
LCLAT1-202ENST00000319406 ZNF280AP59817 542 aaPredicted RBP10.89□□□□□ -0.67
LCLAT1-202ENST00000319406 RASA3Q14644 834 aa10.89□□□□□ -0.67
LCLAT1-202ENST00000319406 PHLDB3Q6NSJ2 640 aa10.89□□□□□ -0.67
LCLAT1-202ENST00000319406 H2AFVQ71UI9 128 aa10.89□□□□□ -0.67
LCLAT1-202ENST00000319406 DHX30Q7L2E3 1194 aaKnown RBP eCLIP10.89□□□□□ -0.67
LCLAT1-202ENST00000319406 SAMD3Q8N6K7 520 aa10.89□□□□□ -0.67
LCLAT1-202ENST00000319406 METTL13Q8N6R0 699 aa10.89□□□□□ -0.67
LCLAT1-202ENST00000319406 SEC14L1Q92503 715 aa10.89□□□□□ -0.67
LCLAT1-202ENST00000319406 PBKQ96KB5 322 aa10.89□□□□□ -0.67
LCLAT1-202ENST00000319406 ZCWPW1Q9H0M4 648 aa10.89□□□□□ -0.67
LCLAT1-202ENST00000319406 ARHGEF3Q9NR81 526 aa10.89□□□□□ -0.67
LCLAT1-202ENST00000319406 SAMD15Q9P1V8 674 aa10.89□□□□□ -0.67
LCLAT1-202ENST00000319406 NKX1-2Q9UD57 310 aaPredicted RBP10.89□□□□□ -0.67
LCLAT1-202ENST00000319406 RGS17Q9UGC6 210 aaPredicted RBP10.89□□□□□ -0.67
LCLAT1-202ENST00000319406 FRMD4BQ9Y2L6 1034 aa10.89□□□□□ -0.67
LCLAT1-202ENST00000319406 CD2APQ9Y5K6 639 aa10.89□□□□□ -0.67
LCLAT1-202ENST00000319406 IGSF9BQ9UPX0 1349 aa10.89□□□□□ -0.67
LCLAT1-202ENST00000319406 TISP43B9A030 160 aa10.89□□□□□ -0.67
LCLAT1-202ENST00000319406 SNX3O60493 162 aa10.89□□□□□ -0.67
LCLAT1-202ENST00000319406 ATP2A2P16615 1042 aaKnown RBP10.89□□□□□ -0.67
LCLAT1-202ENST00000319406 MSH2P43246 934 aa10.89□□□□□ -0.67
LCLAT1-202ENST00000319406 IFNAR2P48551 515 aa10.89□□□□□ -0.67
LCLAT1-202ENST00000319406 PPATQ06203 517 aa10.89□□□□□ -0.67
LCLAT1-202ENST00000319406 BNIP1Q12981 228 aa10.89□□□□□ -0.67
LCLAT1-202ENST00000319406 ALCAMQ13740 583 aa10.89□□□□□ -0.67
LCLAT1-202ENST00000319406 TAF11Q15544 211 aa10.89□□□□□ -0.67
LCLAT1-202ENST00000319406 IFI16Q16666 785 aaKnown RBP10.89□□□□□ -0.67
LCLAT1-202ENST00000319406 UGCGQ16739 394 aa10.89□□□□□ -0.67
LCLAT1-202ENST00000319406 NT5DC3Q86UY8 548 aa10.89□□□□□ -0.67
LCLAT1-202ENST00000319406 MCF2L2Q86YR7 1114 aa10.89□□□□□ -0.67
LCLAT1-202ENST00000319406 ATP8B4Q8TF62 1192 aa10.89□□□□□ -0.67
LCLAT1-202ENST00000319406 TRIM31Q9BZY9 425 aa10.89□□□□□ -0.67
LCLAT1-202ENST00000319406 ZMYND8Q9ULU4 1186 aaPredicted RBP10.89□□□□□ -0.67
LCLAT1-202ENST00000319406 SCAF8Q9UPN6 1271 aaKnown RBP10.89□□□□□ -0.67
LCLAT1-202ENST00000319406 NOC2LQ9Y3T9 749 aaKnown RBP10.89□□□□□ -0.67
LCLAT1-202ENST00000319406 BRCA1P38398 1863 aaKnown RBP10.89□□□□□ -0.67
LCLAT1-202ENST00000319406 A0A1B0GVG6 124 aa10.88□□□□□ -0.67
LCLAT1-202ENST00000319406 TLDC2A0PJX2 215 aa10.88□□□□□ -0.67
LCLAT1-202ENST00000319406 K7ENM7 598 aa10.88□□□□□ -0.67
LCLAT1-202ENST00000319406 PPFIA2O75334 1257 aa10.88□□□□□ -0.67
LCLAT1-202ENST00000319406 OAS1P00973 400 aaKnown RBP10.88□□□□□ -0.67
LCLAT1-202ENST00000319406 NEFHP12036 1026 aa10.88□□□□□ -0.67
LCLAT1-202ENST00000319406 PLS3P13797 630 aa10.88□□□□□ -0.67
LCLAT1-202ENST00000319406 GALCP54803 685 aa10.88□□□□□ -0.67
LCLAT1-202ENST00000319406 DLG4P78352 724 aa10.88□□□□□ -0.67
LCLAT1-202ENST00000319406 GTF2BQ00403 316 aa10.88□□□□□ -0.67
LCLAT1-202ENST00000319406 MYL7Q01449 175 aa10.88□□□□□ -0.67
Retrieved 100 of 20,778 RNA–protein pairs in 20.6 ms