RNA–Protein interactions for RNA: ENST00000315571.5

LDLRAD3-201, Transcript of low density lipoprotein receptor class A domain containing 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene LDLRAD3, Length 3,798 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LDLRAD3-201ENST00000315571 NEK9Q8TD19 979 aa12.46□□□□□ -0.41
LDLRAD3-201ENST00000315571 SPZ1Q9BXG8 430 aa12.46□□□□□ -0.41
LDLRAD3-201ENST00000315571 ZMYND12Q9H0C1 365 aa12.46□□□□□ -0.41
LDLRAD3-201ENST00000315571 SH2D4AQ9H788 454 aa12.46□□□□□ -0.41
LDLRAD3-201ENST00000315571 GINM1Q9NU53 330 aa12.46□□□□□ -0.41
LDLRAD3-201ENST00000315571 RABL2AQ9UBK7 228 aaPredicted RBP12.46□□□□□ -0.41
LDLRAD3-201ENST00000315571 DBR1Q9UK59 544 aaKnown RBP12.46□□□□□ -0.41
LDLRAD3-201ENST00000315571 HPSEQ9Y251 543 aa12.46□□□□□ -0.41
LDLRAD3-201ENST00000315571 SIPA1L1O43166 1804 aa12.46□□□□□ -0.41
LDLRAD3-201ENST00000315571 GSTTP1A0A1W2PQM5 241 aa12.46□□□□□ -0.41
LDLRAD3-201ENST00000315571 TRAF5O00463 557 aa12.46□□□□□ -0.41
LDLRAD3-201ENST00000315571 TPBGLP0DKB5 382 aa12.46□□□□□ -0.41
LDLRAD3-201ENST00000315571 RPL13P26373 211 aaKnown RBP12.46□□□□□ -0.41
LDLRAD3-201ENST00000315571 HOXD12P35452 270 aa12.46□□□□□ -0.41
LDLRAD3-201ENST00000315571 RCAN1P53805 252 aa12.46□□□□□ -0.41
LDLRAD3-201ENST00000315571 POTEEQ6S8J3 1075 aa12.46□□□□□ -0.41
LDLRAD3-201ENST00000315571 MIER3Q7Z3K6 550 aa12.46□□□□□ -0.41
LDLRAD3-201ENST00000315571 PTPRN2Q92932 1015 aa12.46□□□□□ -0.41
LDLRAD3-201ENST00000315571 KLRG1Q96E93 195 aa12.46□□□□□ -0.41
LDLRAD3-201ENST00000315571 RNF14Q9UBS8 474 aa12.46□□□□□ -0.41
LDLRAD3-201ENST00000315571 HPS5Q9UPZ3 1129 aa12.46□□□□□ -0.41
LDLRAD3-201ENST00000315571 IVNS1ABPQ9Y6Y0 642 aa12.46□□□□□ -0.41
LDLRAD3-201ENST00000315571 PASKQ96RG2 1323 aa12.46□□□□□ -0.42
LDLRAD3-201ENST00000315571 MAGEB3O15480 346 aa12.46□□□□□ -0.42
LDLRAD3-201ENST00000315571 GUCY1A2P33402 732 aa12.46□□□□□ -0.42
LDLRAD3-201ENST00000315571 HSP90AA5PQ58FG0 334 aa12.46□□□□□ -0.42
LDLRAD3-201ENST00000315571 SPATA16Q9BXB7 569 aa12.46□□□□□ -0.42
LDLRAD3-201ENST00000315571 CUEDC2Q9H467 287 aa12.46□□□□□ -0.42
LDLRAD3-201ENST00000315571 FRMD4AQ9P2Q2 1039 aaPredicted RBP12.46□□□□□ -0.42
LDLRAD3-201ENST00000315571 PRELID1Q9Y255 219 aa12.46□□□□□ -0.42
LDLRAD3-201ENST00000315571 TMEM247A6NEH6 219 aa12.45□□□□□ -0.42
LDLRAD3-201ENST00000315571 SFI1A8K8P3 1242 aa12.45□□□□□ -0.42
LDLRAD3-201ENST00000315571 RASGRF2O14827 1237 aa12.45□□□□□ -0.42
LDLRAD3-201ENST00000315571 VAV1P15498 845 aa12.45□□□□□ -0.42
LDLRAD3-201ENST00000315571 PCYT1AP49585 367 aa12.45□□□□□ -0.42
LDLRAD3-201ENST00000315571 CHADLQ6NUI6 762 aa12.45□□□□□ -0.42
LDLRAD3-201ENST00000315571 CCDC84Q86UT8 332 aaPredicted RBP12.45□□□□□ -0.42
LDLRAD3-201ENST00000315571 SUPV3L1Q8IYB8 786 aaKnown RBP eCLIP12.45□□□□□ -0.42
LDLRAD3-201ENST00000315571 CYP4X1Q8N118 509 aa12.45□□□□□ -0.42
LDLRAD3-201ENST00000315571 UBA5Q9GZZ9 404 aa12.45□□□□□ -0.42
LDLRAD3-201ENST00000315571 GDF3Q9NR23 364 aa12.45□□□□□ -0.42
LDLRAD3-201ENST00000315571 TRIM75PA6NK02 468 aa12.45□□□□□ -0.42
LDLRAD3-201ENST00000315571 USP2O75604 605 aaPredicted RBP12.45□□□□□ -0.42
LDLRAD3-201ENST00000315571 FGFR1OPO95684 399 aaKnown RBP12.45□□□□□ -0.42
LDLRAD3-201ENST00000315571 ARPC4P59998 168 aa12.45□□□□□ -0.42
LDLRAD3-201ENST00000315571 CDR2Q01850 454 aa12.45□□□□□ -0.42
LDLRAD3-201ENST00000315571 TROAPQ12815 778 aa12.45□□□□□ -0.42
LDLRAD3-201ENST00000315571 PPP2R5BQ15173 497 aa12.45□□□□□ -0.42
LDLRAD3-201ENST00000315571 LIN52Q52LA3 116 aa12.45□□□□□ -0.42
LDLRAD3-201ENST00000315571 TGS1Q96RS0 853 aaKnown RBP12.45□□□□□ -0.42
LDLRAD3-201ENST00000315571 TUBGCP2Q9BSJ2 902 aa12.45□□□□□ -0.42
LDLRAD3-201ENST00000315571 MTRF1LQ9UGC7 380 aaKnown RBP12.45□□□□□ -0.42
LDLRAD3-201ENST00000315571 ZNF112Q9UJU3 913 aa12.45□□□□□ -0.42
LDLRAD3-201ENST00000315571 RBMX2Q9Y388 322 aaKnown RBP12.45□□□□□ -0.42
LDLRAD3-201ENST00000315571 USP17L5A8MUK1 530 aa12.45□□□□□ -0.42
LDLRAD3-201ENST00000315571 SPTLC1O15269 473 aa12.45□□□□□ -0.42
LDLRAD3-201ENST00000315571 PENKP01210 267 aaPredicted RBP12.45□□□□□ -0.42
LDLRAD3-201ENST00000315571 ZNF280DQ6N043 979 aa12.45□□□□□ -0.42
LDLRAD3-201ENST00000315571 GSDMAQ96QA5 445 aa12.45□□□□□ -0.42
LDLRAD3-201ENST00000315571 TUBA8Q9NY65 449 aaPredicted RBP12.45□□□□□ -0.42
LDLRAD3-201ENST00000315571 TBK1Q9UHD2 729 aa12.45□□□□□ -0.42
LDLRAD3-201ENST00000315571 SSC5DA1L4H1 1573 aa12.45□□□□□ -0.42
LDLRAD3-201ENST00000315571 E7ENQ6 273 aa12.44□□□□□ -0.42
LDLRAD3-201ENST00000315571 S100BP04271 92 aaPredicted RBP12.44□□□□□ -0.42
LDLRAD3-201ENST00000315571 KLK7P49862 253 aa12.44□□□□□ -0.42
LDLRAD3-201ENST00000315571 IFI35P80217 286 aaPredicted RBP12.44□□□□□ -0.42
LDLRAD3-201ENST00000315571 ZYXQ15942 572 aaKnown RBP12.44□□□□□ -0.42
LDLRAD3-201ENST00000315571 ISCUQ9H1K1 167 aa12.44□□□□□ -0.42
LDLRAD3-201ENST00000315571 AS3MTQ9HBK9 375 aa12.44□□□□□ -0.42
LDLRAD3-201ENST00000315571 RXFP1Q9HBX9 757 aa12.44□□□□□ -0.42
LDLRAD3-201ENST00000315571 TMEM98Q9Y2Y6 226 aa12.44□□□□□ -0.42
LDLRAD3-201ENST00000315571 ERVK-9P63128 1117 aa12.44□□□□□ -0.42
LDLRAD3-201ENST00000315571 INAQ16352 499 aa12.44□□□□□ -0.42
LDLRAD3-201ENST00000315571 ZC2HC1CQ53FD0 456 aaPredicted RBP12.44□□□□□ -0.42
LDLRAD3-201ENST00000315571 RILPL1Q5EBL4 403 aa12.44□□□□□ -0.42
LDLRAD3-201ENST00000315571 NOSTRINQ8IVI9 506 aa12.44□□□□□ -0.42
LDLRAD3-201ENST00000315571 PIP4K2CQ8TBX8 421 aa12.44□□□□□ -0.42
LDLRAD3-201ENST00000315571 ACER1Q8TDN7 264 aa12.44□□□□□ -0.42
LDLRAD3-201ENST00000315571 ERLEC1Q96DZ1 483 aa12.44□□□□□ -0.42
LDLRAD3-201ENST00000315571 THAP9Q9H5L6 903 aa12.44□□□□□ -0.42
LDLRAD3-201ENST00000315571 FBXO9Q9UK97 447 aaPredicted RBP12.44□□□□□ -0.42
LDLRAD3-201ENST00000315571 CAPN11Q9UMQ6 739 aa12.44□□□□□ -0.42
LDLRAD3-201ENST00000315571 GDAQ9Y2T3 454 aa12.44□□□□□ -0.42
LDLRAD3-201ENST00000315571 MAPK13O15264 365 aa12.44□□□□□ -0.42
LDLRAD3-201ENST00000315571 NOVP48745 357 aa12.44□□□□□ -0.42
LDLRAD3-201ENST00000315571 OXCT1P55809 520 aa12.44□□□□□ -0.42
LDLRAD3-201ENST00000315571 PDE1BQ01064 536 aa12.44□□□□□ -0.42
LDLRAD3-201ENST00000315571 GFPT1Q06210 699 aaPredicted RBP12.44□□□□□ -0.42
LDLRAD3-201ENST00000315571 ZNF174Q15697 407 aa12.44□□□□□ -0.42
LDLRAD3-201ENST00000315571 SLFN13Q68D06 897 aa12.44□□□□□ -0.42
LDLRAD3-201ENST00000315571 FITM2Q8N6M3 262 aa12.44□□□□□ -0.42
LDLRAD3-201ENST00000315571 WASF1Q92558 559 aa12.44□□□□□ -0.42
LDLRAD3-201ENST00000315571 PAGE5Q96GU1 130 aa12.44□□□□□ -0.42
LDLRAD3-201ENST00000315571 EURLQ9NYK6 297 aa12.44□□□□□ -0.42
LDLRAD3-201ENST00000315571 GMEB1Q9Y692 573 aa12.44□□□□□ -0.42
LDLRAD3-201ENST00000315571 MYH8P13535 1937 aa12.44□□□□□ -0.42
LDLRAD3-201ENST00000315571 WDR91A4D1P6 747 aa12.43□□□□□ -0.42
LDLRAD3-201ENST00000315571 GYG2O15488 501 aa12.43□□□□□ -0.42
LDLRAD3-201ENST00000315571 ATP5HO75947 161 aa12.43□□□□□ -0.42
LDLRAD3-201ENST00000315571 LCA5LO95447 670 aa12.43□□□□□ -0.42
Retrieved 100 of 20,778 RNA–protein pairs in 36.3 ms