RNA–Protein interactions for RNA: ENST00000314915.6

BDNF-201, Transcript of brain derived neurotrophic factor, humanhuman

TSL 1 (best) BASIC

Gene BDNF, Length 4,340 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
BDNF-201ENST00000314915 CPSF7Q8N684 471 aaKnown RBP9.88□□□□□ -0.83
BDNF-201ENST00000314915 RASSF5Q8WWW0 418 aa9.88□□□□□ -0.83
BDNF-201ENST00000314915 TSG101Q99816 390 aa9.88□□□□□ -0.83
BDNF-201ENST00000314915 PRMT1Q99873 361 aaKnown RBP9.88□□□□□ -0.83
BDNF-201ENST00000314915 RIMKLBQ9ULI2 386 aa9.88□□□□□ -0.83
BDNF-201ENST00000314915 DNM3Q9UQ16 869 aa9.88□□□□□ -0.83
BDNF-201ENST00000314915 ABCC6O95255 1503 aa9.88□□□□□ -0.83
BDNF-201ENST00000314915 ZW10O43264 779 aa9.88□□□□□ -0.83
BDNF-201ENST00000314915 GYPCP04921 128 aa9.88□□□□□ -0.83
BDNF-201ENST00000314915 PCNAP12004 261 aa9.88□□□□□ -0.83
BDNF-201ENST00000314915 CRABP2P29373 138 aa9.88□□□□□ -0.83
BDNF-201ENST00000314915 WEE1P30291 646 aa9.88□□□□□ -0.83
BDNF-201ENST00000314915 RUNX1T1Q06455 604 aa9.88□□□□□ -0.83
BDNF-201ENST00000314915 KHDC1Q4VXA5 237 aaKnown RBP9.88□□□□□ -0.83
BDNF-201ENST00000314915 IGSF11Q5DX21 431 aa9.88□□□□□ -0.83
BDNF-201ENST00000314915 IZUMO2Q6UXV1 221 aa9.88□□□□□ -0.83
BDNF-201ENST00000314915 TERB1Q8NA31 727 aa9.88□□□□□ -0.83
BDNF-201ENST00000314915 LINC00301Q8NCQ3 95 aa9.88□□□□□ -0.83
BDNF-201ENST00000314915 SLAIN1Q8ND83 568 aa9.88□□□□□ -0.83
BDNF-201ENST00000314915 DDX54Q8TDD1 881 aaKnown RBP9.88□□□□□ -0.83
BDNF-201ENST00000314915 EPS8L3Q8TE67 593 aaKnown RBP9.88□□□□□ -0.83
BDNF-201ENST00000314915 SNX29Q8TEQ0 813 aa9.88□□□□□ -0.83
BDNF-201ENST00000314915 CHPT1Q8WUD6 406 aa9.88□□□□□ -0.83
BDNF-201ENST00000314915 FBXL18Q96ME1 805 aa9.88□□□□□ -0.83
BDNF-201ENST00000314915 ABCG4Q9H172 646 aa9.88□□□□□ -0.83
BDNF-201ENST00000314915 CD209Q9NNX6 404 aa9.88□□□□□ -0.83
BDNF-201ENST00000314915 STMN3Q9NZ72 180 aa9.88□□□□□ -0.83
BDNF-201ENST00000314915 EMC3Q9P0I2 261 aa9.88□□□□□ -0.83
BDNF-201ENST00000314915 FBXL5Q9UKA1 691 aa9.88□□□□□ -0.83
BDNF-201ENST00000314915 TRAF3IP3Q9Y228 551 aa9.88□□□□□ -0.83
BDNF-201ENST00000314915 MYOM1P52179 1685 aa9.88□□□□□ -0.83
BDNF-201ENST00000314915 PBRM1Q86U86 1689 aa9.88□□□□□ -0.83
BDNF-201ENST00000314915 PLEKHG3A1L390 1219 aa9.88□□□□□ -0.83
BDNF-201ENST00000314915 ZNF862O60290 1169 aa9.88□□□□□ -0.83
BDNF-201ENST00000314915 PRLP01236 227 aa9.88□□□□□ -0.83
BDNF-201ENST00000314915 KRT20P35900 424 aa9.88□□□□□ -0.83
BDNF-201ENST00000314915 CLK3P49761 638 aaKnown RBP9.88□□□□□ -0.83
BDNF-201ENST00000314915 TNNC1P63316 161 aa9.88□□□□□ -0.83
BDNF-201ENST00000314915 ADCK5Q3MIX3 580 aa9.88□□□□□ -0.83
BDNF-201ENST00000314915 EFCAB2Q5VUJ9 269 aa9.88□□□□□ -0.83
BDNF-201ENST00000314915 CASKIN2Q8WXE0 1202 aa9.88□□□□□ -0.83
BDNF-201ENST00000314915 METTL2AQ96IZ6 378 aaKnown RBP9.88□□□□□ -0.83
BDNF-201ENST00000314915 TLE6Q9H808 572 aa9.88□□□□□ -0.83
BDNF-201ENST00000314915 DBF4Q9UBU7 674 aaPredicted RBP9.88□□□□□ -0.83
BDNF-201ENST00000314915 DNAJB4Q9UDY4 337 aa9.88□□□□□ -0.83
BDNF-201ENST00000314915 PCDHGA3Q9Y5H0 932 aa9.88□□□□□ -0.83
BDNF-201ENST00000314915 PTPRTO14522 1441 aa9.88□□□□□ -0.83
BDNF-201ENST00000314915 KNDC1Q76NI1 1749 aa9.87□□□□□ -0.83
BDNF-201ENST00000314915 SFI1A8K8P3 1242 aa9.87□□□□□ -0.83
BDNF-201ENST00000314915 EXTL3O43909 919 aa9.87□□□□□ -0.83
BDNF-201ENST00000314915 PFKFB1P16118 471 aa9.87□□□□□ -0.83
BDNF-201ENST00000314915 PTPN4P29074 926 aa9.87□□□□□ -0.83
BDNF-201ENST00000314915 MLLT6P55198 1093 aaPredicted RBP9.87□□□□□ -0.83
BDNF-201ENST00000314915 SF3B4Q15427 424 aaKnown RBP eCLIP9.87□□□□□ -0.83
BDNF-201ENST00000314915 GPR141Q7Z602 305 aa9.87□□□□□ -0.83
BDNF-201ENST00000314915 CENPSQ8N2Z9 138 aa9.87□□□□□ -0.83
BDNF-201ENST00000314915 AADATQ8N5Z0 425 aa9.87□□□□□ -0.83
BDNF-201ENST00000314915 C7orf57Q8NEG2 295 aa9.87□□□□□ -0.83
BDNF-201ENST00000314915 BCL7CQ8WUZ0 217 aaPredicted RBP9.87□□□□□ -0.83
BDNF-201ENST00000314915 MEIS3Q99687 375 aa9.87□□□□□ -0.83
BDNF-201ENST00000314915 FRMD4AQ9P2Q2 1039 aaPredicted RBP9.87□□□□□ -0.83
BDNF-201ENST00000314915 TBXAS1P24557 533 aaPredicted RBP9.87□□□□□ -0.83
BDNF-201ENST00000314915 FXR1P51114 621 aaKnown RBP eCLIP9.87□□□□□ -0.83
BDNF-201ENST00000314915 EVA1CP58658 441 aa9.87□□□□□ -0.83
BDNF-201ENST00000314915 TFAP4Q01664 338 aa9.87□□□□□ -0.83
BDNF-201ENST00000314915 HNRNPDQ14103 355 aaKnown RBP9.87□□□□□ -0.83
BDNF-201ENST00000314915 FAM47EQ6ZV65 393 aa9.87□□□□□ -0.83
BDNF-201ENST00000314915 USP38Q8NB14 1042 aa9.87□□□□□ -0.83
BDNF-201ENST00000314915 ARHGEF2Q92974 986 aaKnown RBP9.87□□□□□ -0.83
BDNF-201ENST00000314915 PGM2Q96G03 612 aa9.87□□□□□ -0.83
BDNF-201ENST00000314915 POLR3EQ9NVU0 708 aa9.87□□□□□ -0.83
BDNF-201ENST00000314915 PRKAG3Q9UGI9 489 aa9.87□□□□□ -0.83
BDNF-201ENST00000314915 A8MXQ7 604 aa9.87□□□□□ -0.83
BDNF-201ENST00000314915 INO80B-WBP1J3KQ70 363 aa9.87□□□□□ -0.83
BDNF-201ENST00000314915 XPO1O14980 1071 aaKnown RBP9.87□□□□□ -0.83
BDNF-201ENST00000314915 FYB1O15117 783 aa9.87□□□□□ -0.83
BDNF-201ENST00000314915 GPC4O75487 556 aa9.87□□□□□ -0.83
BDNF-201ENST00000314915 CHN2P52757 468 aa9.87□□□□□ -0.83
BDNF-201ENST00000314915 SF3A3Q12874 501 aaKnown RBP eCLIP9.87□□□□□ -0.83
BDNF-201ENST00000314915 HSP90AA4PQ58FG1 418 aa9.87□□□□□ -0.83
BDNF-201ENST00000314915 METTL2BQ6P1Q9 378 aaKnown RBP9.87□□□□□ -0.83
BDNF-201ENST00000314915 FRA10AC1Q70Z53 315 aa9.87□□□□□ -0.83
BDNF-201ENST00000314915 PHF6Q8IWS0 365 aaKnown RBP eCLIP9.87□□□□□ -0.83
BDNF-201ENST00000314915 PCYOX1LQ8NBM8 494 aa9.87□□□□□ -0.83
BDNF-201ENST00000314915 APPL2Q8NEU8 664 aa9.87□□□□□ -0.83
BDNF-201ENST00000314915 OR2W6PQ8NHA6 318 aa9.87□□□□□ -0.83
BDNF-201ENST00000314915 NOX5Q96PH1 765 aa9.87□□□□□ -0.83
BDNF-201ENST00000314915 MTMR12Q9C0I1 747 aa9.87□□□□□ -0.83
BDNF-201ENST00000314915 MBIPQ9NS73 344 aa9.87□□□□□ -0.83
BDNF-201ENST00000314915 ADD3Q9UEY8 706 aaKnown RBP9.87□□□□□ -0.83
BDNF-201ENST00000314915 NUP153P49790 1475 aaKnown RBP9.86□□□□□ -0.83
BDNF-201ENST00000314915 TEX33O43247 280 aa9.86□□□□□ -0.83
BDNF-201ENST00000314915 TBX10O75333 385 aa9.86□□□□□ -0.83
BDNF-201ENST00000314915 DCTN3O75935 186 aa9.86□□□□□ -0.83
BDNF-201ENST00000314915 FUCA1P04066 466 aa9.86□□□□□ -0.83
BDNF-201ENST00000314915 LONP1P36776 959 aaKnown RBP9.86□□□□□ -0.83
BDNF-201ENST00000314915 XIAPP98170 497 aa9.86□□□□□ -0.83
BDNF-201ENST00000314915 RNASELQ05823 741 aaKnown RBP9.86□□□□□ -0.83
BDNF-201ENST00000314915 STK3Q13188 491 aa9.86□□□□□ -0.83
BDNF-201ENST00000314915 ZNF829Q3KNS6 432 aaPredicted RBP9.86□□□□□ -0.83
Retrieved 100 of 20,778 RNA–protein pairs in 39.1 ms