RNA–Protein interactions for RNA: ENST00000312912.9

KDM3A-201, Transcript of lysine demethylase 3A, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene KDM3A, Length 4,886 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
KDM3A-201ENST00000312912 SYDE1Q6ZW31 735 aaPredicted RBP16.26■□□□□ 0.19
KDM3A-201ENST00000312912 CCDC124Q96CT7 223 aaKnown RBP16.26■□□□□ 0.19
KDM3A-201ENST00000312912 TIPINQ9BVW5 301 aa16.26■□□□□ 0.19
KDM3A-201ENST00000312912 TBC1D23Q9NUY8 699 aa16.26■□□□□ 0.19
KDM3A-201ENST00000312912 DSTYKQ6XUX3 929 aa16.25■□□□□ 0.19
KDM3A-201ENST00000312912 ZC3H15Q8WU90 426 aaKnown RBP16.25■□□□□ 0.19
KDM3A-201ENST00000312912 SCG3Q8WXD2 468 aaKnown RBP16.25■□□□□ 0.19
KDM3A-201ENST00000312912 MTRQ99707 1265 aa16.25■□□□□ 0.19
KDM3A-201ENST00000312912 DLGAP2Q9P1A6 1054 aa16.25■□□□□ 0.19
KDM3A-201ENST00000312912 KIAA0391O15091 583 aaKnown RBP16.25■□□□□ 0.19
KDM3A-201ENST00000312912 CTDNEP1O95476 244 aa16.25■□□□□ 0.19
KDM3A-201ENST00000312912 UCHL3P15374 230 aa16.25■□□□□ 0.19
KDM3A-201ENST00000312912 XPAP23025 273 aaPredicted RBP16.25■□□□□ 0.19
KDM3A-201ENST00000312912 MAP3K14Q99558 947 aa16.25■□□□□ 0.19
KDM3A-201ENST00000312912 RGL1Q9NZL6 768 aa16.25■□□□□ 0.19
KDM3A-201ENST00000312912 ARHGEF40Q8TER5 1519 aa16.25■□□□□ 0.19
KDM3A-201ENST00000312912 GALCP54803 685 aa16.25■□□□□ 0.19
KDM3A-201ENST00000312912 TMTC4Q5T4D3 741 aa16.25■□□□□ 0.19
KDM3A-201ENST00000312912 MFSD4BQ5TF39 518 aa16.25■□□□□ 0.19
KDM3A-201ENST00000312912 GPD1LQ8N335 351 aa16.25■□□□□ 0.19
KDM3A-201ENST00000312912 ARHGEF1Q92888 912 aaKnown RBP16.25■□□□□ 0.19
KDM3A-201ENST00000312912 MOV10L1Q9BXT6 1211 aaKnown RBP16.25■□□□□ 0.19
KDM3A-201ENST00000312912 DCTN4Q9UJW0 460 aa16.25■□□□□ 0.19
KDM3A-201ENST00000312912 LZTS1Q9Y250 596 aa16.25■□□□□ 0.19
KDM3A-201ENST00000312912 PCDHA10Q9Y5I2 948 aa16.25■□□□□ 0.19
KDM3A-201ENST00000312912 PDS5AQ29RF7 1337 aaKnown RBP16.25■□□□□ 0.19
KDM3A-201ENST00000312912 SMARCA1P28370 1054 aa16.25■□□□□ 0.19
KDM3A-201ENST00000312912 GPC3P51654 580 aa16.25■□□□□ 0.19
KDM3A-201ENST00000312912 CDR2Q01850 454 aa16.25■□□□□ 0.19
KDM3A-201ENST00000312912 ACAD11Q709F0 780 aa16.25■□□□□ 0.19
KDM3A-201ENST00000312912 MFN1Q8IWA4 741 aa16.25■□□□□ 0.19
KDM3A-201ENST00000312912 ZFATQ9P243 1243 aa16.25■□□□□ 0.19
KDM3A-201ENST00000312912 PCSK1NQ9UHG2 260 aa16.25■□□□□ 0.19
KDM3A-201ENST00000312912 PTPRUQ92729 1446 aa16.24■□□□□ 0.19
KDM3A-201ENST00000312912 ZNF185O15231 689 aa16.24■□□□□ 0.19
KDM3A-201ENST00000312912 ZBTB24O43167 697 aaPredicted RBP16.24■□□□□ 0.19
KDM3A-201ENST00000312912 ARHGEF9O43307 516 aa16.24■□□□□ 0.19
KDM3A-201ENST00000312912 TPD52L2O43399 206 aaKnown RBP16.24■□□□□ 0.19
KDM3A-201ENST00000312912 GYPCP04921 128 aa16.24■□□□□ 0.19
KDM3A-201ENST00000312912 IL1RL1Q01638 556 aa16.24■□□□□ 0.19
KDM3A-201ENST00000312912 SNRNP48Q6IEG0 339 aaKnown RBP16.24■□□□□ 0.19
KDM3A-201ENST00000312912 SWSAP1Q6NVH7 229 aa16.24■□□□□ 0.19
KDM3A-201ENST00000312912 DNAJC9Q8WXX5 260 aa16.24■□□□□ 0.19
KDM3A-201ENST00000312912 MRPL40Q9NQ50 206 aaKnown RBP16.24■□□□□ 0.19
KDM3A-201ENST00000312912 PARVAQ9NVD7 372 aa16.24■□□□□ 0.19
KDM3A-201ENST00000312912 NDE1Q9NXR1 346 aa16.24■□□□□ 0.19
KDM3A-201ENST00000312912 BFARQ9NZS9 450 aa16.24■□□□□ 0.19
KDM3A-201ENST00000312912 A0A1W2PQJ5 194 aa16.24■□□□□ 0.19
KDM3A-201ENST00000312912 GOLGA8MH3BSY2 632 aa16.24■□□□□ 0.19
KDM3A-201ENST00000312912 HSPA9P38646 679 aaKnown RBP16.24■□□□□ 0.19
KDM3A-201ENST00000312912 ZBED8Q8IZ13 594 aa16.24■□□□□ 0.19
KDM3A-201ENST00000312912 C1orf54Q8WWF1 131 aa16.24■□□□□ 0.19
KDM3A-201ENST00000312912 HPS3Q969F9 1004 aa16.24■□□□□ 0.19
KDM3A-201ENST00000312912 IL25Q9H293 177 aa16.24■□□□□ 0.19
KDM3A-201ENST00000312912 SUN2Q9UH99 717 aa16.24■□□□□ 0.19
KDM3A-201ENST00000312912 ITGB1BP2Q9UKP3 347 aa16.24■□□□□ 0.19
KDM3A-201ENST00000312912 STAP1Q9ULZ2 295 aa16.24■□□□□ 0.19
KDM3A-201ENST00000312912 IQCA1LA6NCM1 817 aa16.24■□□□□ 0.19
KDM3A-201ENST00000312912 GSTA4O15217 222 aa16.24■□□□□ 0.19
KDM3A-201ENST00000312912 CDH16O75309 829 aa16.24■□□□□ 0.19
KDM3A-201ENST00000312912 DUOXA2Q1HG44 320 aa16.24■□□□□ 0.19
KDM3A-201ENST00000312912 Q3C1V9 767 aa16.24■□□□□ 0.19
KDM3A-201ENST00000312912 CCDC80Q76M96 950 aa16.24■□□□□ 0.19
KDM3A-201ENST00000312912 HNRNPLLQ8WVV9 542 aaKnown RBP16.24■□□□□ 0.19
KDM3A-201ENST00000312912 VPS11Q9H270 941 aa16.24■□□□□ 0.19
KDM3A-201ENST00000312912 APEX2Q9UBZ4 518 aa16.24■□□□□ 0.19
KDM3A-201ENST00000312912 CDC42BPBQ9Y5S2 1711 aa16.24■□□□□ 0.19
KDM3A-201ENST00000312912 NMT1P30419 496 aaKnown RBP16.24■□□□□ 0.19
KDM3A-201ENST00000312912 PPARGP37231 505 aaPredicted RBP16.24■□□□□ 0.19
KDM3A-201ENST00000312912 RFX5P48382 616 aaPredicted RBP16.24■□□□□ 0.19
KDM3A-201ENST00000312912 MAP3K7CLP57077 242 aa16.24■□□□□ 0.19
KDM3A-201ENST00000312912 AP2B1P63010 937 aa16.24■□□□□ 0.19
KDM3A-201ENST00000312912 NCAPHQ15003 741 aa16.24■□□□□ 0.19
KDM3A-201ENST00000312912 NAB2Q15742 525 aa16.24■□□□□ 0.19
KDM3A-201ENST00000312912 C2orf69Q8N8R5 385 aa16.24■□□□□ 0.19
KDM3A-201ENST00000312912 KCNB2Q92953 911 aa16.24■□□□□ 0.19
KDM3A-201ENST00000312912 MRPL4Q9BYD3 311 aaKnown RBP16.24■□□□□ 0.19
KDM3A-201ENST00000312912 GCOM2Q9BZD3 368 aaPredicted RBP16.24■□□□□ 0.19
KDM3A-201ENST00000312912 ZNF302Q9NR11 478 aa16.24■□□□□ 0.19
KDM3A-201ENST00000312912 PDP2Q9P2J9 529 aa16.24■□□□□ 0.19
KDM3A-201ENST00000312912 AGO2Q9UKV8 859 aaKnown RBP16.24■□□□□ 0.19
KDM3A-201ENST00000312912 COPS2P61201 443 aa16.23■□□□□ 0.19
KDM3A-201ENST00000312912 SWT1Q5T5J6 900 aaKnown RBP16.23■□□□□ 0.19
KDM3A-201ENST00000312912 TRMT10CQ7L0Y3 403 aaKnown RBP16.23■□□□□ 0.19
KDM3A-201ENST00000312912 HIPK4Q8NE63 616 aa16.23■□□□□ 0.19
KDM3A-201ENST00000312912 BTBD6Q96KE9 485 aa16.23■□□□□ 0.19
KDM3A-201ENST00000312912 RBAKQ9NYW8 714 aaPredicted RBP16.23■□□□□ 0.19
KDM3A-201ENST00000312912 PNMA3Q9UL41 463 aa16.23■□□□□ 0.19
KDM3A-201ENST00000312912 TRIM33Q9UPN9 1127 aa16.23■□□□□ 0.19
KDM3A-201ENST00000312912 DYNC1LI1Q9Y6G9 523 aaKnown RBP16.23■□□□□ 0.19
KDM3A-201ENST00000312912 CROCC2H7BZ55 1655 aa16.23■□□□□ 0.19
KDM3A-201ENST00000312912 MYMKA6NI61 221 aa16.23■□□□□ 0.19
KDM3A-201ENST00000312912 EEF1B2P24534 225 aaKnown RBP16.23■□□□□ 0.19
KDM3A-201ENST00000312912 LRRC14Q15048 493 aa16.23■□□□□ 0.19
KDM3A-201ENST00000312912 C1orf146Q5VVC0 180 aa16.23■□□□□ 0.19
KDM3A-201ENST00000312912 ZNF34Q8IZ26 560 aa16.23■□□□□ 0.19
KDM3A-201ENST00000312912 KCTD17Q8N5Z5 321 aa16.23■□□□□ 0.19
KDM3A-201ENST00000312912 GIPC2Q8TF65 315 aa16.23■□□□□ 0.19
KDM3A-201ENST00000312912 DACT3Q96B18 629 aaPredicted RBP16.23■□□□□ 0.19
KDM3A-201ENST00000312912 FAM49AQ9H0Q0 323 aaPredicted RBP16.23■□□□□ 0.19
Retrieved 100 of 20,778 RNA–protein pairs in 23.8 ms