RNA–Protein interactions for RNA: ENST00000309246.9

TPT1-201, Transcript of tumor protein, translationally-controlled 1, humanhuman

TSL 1 (best) BASIC

Gene TPT1, Length 1,008 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TPT1-201ENST00000309246 SLC27A1Q6PCB7 646 aa13.51□□□□□ -0.25
TPT1-201ENST00000309246 ELMSAN1Q6PJG2 1045 aa13.51□□□□□ -0.25
TPT1-201ENST00000309246 DIS3L2Q8IYB7 885 aaKnown RBP13.51□□□□□ -0.25
TPT1-201ENST00000309246 SIX5Q8N196 739 aa13.51□□□□□ -0.25
TPT1-201ENST00000309246 NSUN7Q8NE18 718 aaKnown RBP13.51□□□□□ -0.25
TPT1-201ENST00000309246 ZNF707Q96C28 371 aaPredicted RBP13.51□□□□□ -0.25
TPT1-201ENST00000309246 MYADMQ96S97 322 aa13.51□□□□□ -0.25
TPT1-201ENST00000309246 NFKBIZQ9BYH8 718 aa13.51□□□□□ -0.25
TPT1-201ENST00000309246 WDR6Q9NNW5 1121 aaKnown RBP13.51□□□□□ -0.25
TPT1-201ENST00000309246 CHST7Q9NS84 486 aa13.51□□□□□ -0.25
TPT1-201ENST00000309246 IGSF9Q9P2J2 1179 aa13.51□□□□□ -0.25
TPT1-201ENST00000309246 PARP2Q9UGN5 583 aa13.51□□□□□ -0.25
TPT1-201ENST00000309246 PRR23AA6NEV1 266 aa13.5□□□□□ -0.25
TPT1-201ENST00000309246 CFHP08603 1231 aa13.5□□□□□ -0.25
TPT1-201ENST00000309246 AOC1P19801 751 aa13.5□□□□□ -0.25
TPT1-201ENST00000309246 NBL1P41271 181 aa13.5□□□□□ -0.25
TPT1-201ENST00000309246 ANAPC15P60006 121 aa13.5□□□□□ -0.25
TPT1-201ENST00000309246 USP41Q3LFD5 358 aa13.5□□□□□ -0.25
TPT1-201ENST00000309246 FRMD5Q7Z6J6 570 aa13.5□□□□□ -0.25
TPT1-201ENST00000309246 RIN2Q8WYP3 895 aaPredicted RBP13.5□□□□□ -0.25
TPT1-201ENST00000309246 STAMQ92783 540 aa13.5□□□□□ -0.25
TPT1-201ENST00000309246 MTMR9Q96QG7 549 aa13.5□□□□□ -0.25
TPT1-201ENST00000309246 PAAF1Q9BRP4 392 aa13.5□□□□□ -0.25
TPT1-201ENST00000309246 TMEM60Q9H2L4 133 aa13.5□□□□□ -0.25
TPT1-201ENST00000309246 PIDD1Q9HB75 910 aa13.5□□□□□ -0.25
TPT1-201ENST00000309246 DPP7Q9UHL4 492 aa13.5□□□□□ -0.25
TPT1-201ENST00000309246 METRNQ9UJH8 293 aa13.5□□□□□ -0.25
TPT1-201ENST00000309246 ADAM28Q9UKQ2 775 aa13.5□□□□□ -0.25
TPT1-201ENST00000309246 MIA3Q5JRA6 1907 aa13.5□□□□□ -0.25
TPT1-201ENST00000309246 ZMYM2Q9UBW7 1377 aa13.49□□□□□ -0.25
TPT1-201ENST00000309246 A0A1B0GUA9 196 aa13.49□□□□□ -0.25
TPT1-201ENST00000309246 TGM5O43548 720 aa13.49□□□□□ -0.25
TPT1-201ENST00000309246 SPATA31C1P0DKV0 1188 aa13.49□□□□□ -0.25
TPT1-201ENST00000309246 ATP2B1P20020 1258 aa13.49□□□□□ -0.25
TPT1-201ENST00000309246 MCM7P33993 719 aa13.49□□□□□ -0.25
TPT1-201ENST00000309246 PRSS55Q6UWB4 352 aaPredicted RBP13.49□□□□□ -0.25
TPT1-201ENST00000309246 CYP26C1Q6V0L0 522 aa13.49□□□□□ -0.25
TPT1-201ENST00000309246 HS6ST3Q8IZP7 471 aa13.49□□□□□ -0.25
TPT1-201ENST00000309246 HASPINQ8TF76 798 aa13.49□□□□□ -0.25
TPT1-201ENST00000309246 RHOBTB2Q9BYZ6 727 aa13.49□□□□□ -0.25
TPT1-201ENST00000309246 NT5C3AQ9H0P0 336 aa13.49□□□□□ -0.25
TPT1-201ENST00000309246 APOBEC3CQ9NRW3 190 aaKnown RBP eCLIP13.49□□□□□ -0.25
TPT1-201ENST00000309246 EPS15L1Q9UBC2 864 aa13.49□□□□□ -0.25
TPT1-201ENST00000309246 CASTOR2A6NHX0 329 aa13.48□□□□□ -0.25
TPT1-201ENST00000309246 MED24O75448 989 aa13.48□□□□□ -0.25
TPT1-201ENST00000309246 TADA2AO75478 443 aa13.48□□□□□ -0.25
TPT1-201ENST00000309246 GUCY1B3Q02153 619 aa13.48□□□□□ -0.25
TPT1-201ENST00000309246 TRIM29Q14134 588 aa13.48□□□□□ -0.25
TPT1-201ENST00000309246 HSP90AA2PQ14568 343 aaPredicted RBP13.48□□□□□ -0.25
TPT1-201ENST00000309246 RTP2Q5QGT7 225 aa13.48□□□□□ -0.25
TPT1-201ENST00000309246 CDCA2Q69YH5 1023 aaPredicted RBP13.48□□□□□ -0.25
TPT1-201ENST00000309246 LILRA6Q6PI73 481 aa13.48□□□□□ -0.25
TPT1-201ENST00000309246 GET4Q7L5D6 327 aaPredicted RBP13.48□□□□□ -0.25
TPT1-201ENST00000309246 CATSPER3Q86XQ3 398 aa13.48□□□□□ -0.25
TPT1-201ENST00000309246 ZBTB8OSQ8IWT0 167 aa13.48□□□□□ -0.25
TPT1-201ENST00000309246 CCDC105Q8IYK2 499 aa13.48□□□□□ -0.25
TPT1-201ENST00000309246 ST13P5Q8NFI4 369 aaPredicted RBP13.48□□□□□ -0.25
TPT1-201ENST00000309246 HDAC7Q8WUI4 952 aa13.48□□□□□ -0.25
TPT1-201ENST00000309246 BSNDQ8WZ55 320 aa13.48□□□□□ -0.25
TPT1-201ENST00000309246 RTP3Q9BQQ7 232 aa13.48□□□□□ -0.25
TPT1-201ENST00000309246 PLEKHA4Q9H4M7 779 aa13.48□□□□□ -0.25
TPT1-201ENST00000309246 PRMT7Q9NVM4 692 aaPredicted RBP13.48□□□□□ -0.25
TPT1-201ENST00000309246 FNIP2Q9P278 1114 aa13.48□□□□□ -0.25
TPT1-201ENST00000309246 CA14Q9ULX7 337 aa13.48□□□□□ -0.25
TPT1-201ENST00000309246 NOTCH4Q99466 2003 aa13.47□□□□□ -0.25
TPT1-201ENST00000309246 SF3B1O75533 1304 aaKnown RBP eCLIP13.47□□□□□ -0.25
TPT1-201ENST00000309246 KRBA1A5PL33 1030 aa13.47□□□□□ -0.25
TPT1-201ENST00000309246 PTGESO14684 152 aa13.47□□□□□ -0.25
TPT1-201ENST00000309246 KIF4AO95239 1232 aa13.47□□□□□ -0.25
TPT1-201ENST00000309246 PAPLNO95428 1278 aa13.47□□□□□ -0.25
TPT1-201ENST00000309246 SEC24BO95487 1268 aa13.47□□□□□ -0.25
TPT1-201ENST00000309246 XRCC6P12956 609 aaKnown RBP eCLIP13.47□□□□□ -0.25
TPT1-201ENST00000309246 LIG1P18858 919 aa13.47□□□□□ -0.25
TPT1-201ENST00000309246 RFX1P22670 979 aa13.47□□□□□ -0.25
TPT1-201ENST00000309246 CREMQ03060 361 aa13.47□□□□□ -0.25
TPT1-201ENST00000309246 ST3GAL1Q11201 340 aa13.47□□□□□ -0.25
TPT1-201ENST00000309246 TUSC3Q13454 348 aa13.47□□□□□ -0.25
TPT1-201ENST00000309246 TMEM132AQ24JP5 1023 aa13.47□□□□□ -0.25
TPT1-201ENST00000309246 POTEGQ6S5H5 508 aa13.47□□□□□ -0.25
TPT1-201ENST00000309246 SLC44A3Q8N4M1 653 aa13.47□□□□□ -0.25
TPT1-201ENST00000309246 DTWD2Q8NBA8 298 aa13.47□□□□□ -0.25
TPT1-201ENST00000309246 MCPH1Q8NEM0 835 aa13.47□□□□□ -0.25
TPT1-201ENST00000309246 NKD2Q969F2 451 aaPredicted RBP13.47□□□□□ -0.25
TPT1-201ENST00000309246 PRIMPOLQ96LW4 560 aa13.47□□□□□ -0.25
TPT1-201ENST00000309246 PRKD2Q9BZL6 878 aa13.47□□□□□ -0.25
TPT1-201ENST00000309246 CXCL16Q9H2A7 254 aa13.47□□□□□ -0.25
TPT1-201ENST00000309246 FZD8Q9H461 694 aa13.47□□□□□ -0.25
TPT1-201ENST00000309246 PDZD7Q9H5P4 517 aa13.47□□□□□ -0.25
TPT1-201ENST00000309246 TUFT1Q9NNX1 390 aa13.47□□□□□ -0.25
TPT1-201ENST00000309246 ZDHHC7Q9NXF8 308 aa13.47□□□□□ -0.25
TPT1-201ENST00000309246 SNTG2Q9NY99 539 aa13.47□□□□□ -0.25
TPT1-201ENST00000309246 WNT16Q9UBV4 365 aa13.47□□□□□ -0.25
TPT1-201ENST00000309246 USP20Q9Y2K6 914 aa13.47□□□□□ -0.25
TPT1-201ENST00000309246 FAM186AA6NE01 2351 aa13.47□□□□□ -0.25
TPT1-201ENST00000309246 CITO14578 2027 aa13.47□□□□□ -0.25
TPT1-201ENST00000309246 FANCMQ8IYD8 2048 aa13.47□□□□□ -0.25
TPT1-201ENST00000309246 MYH11P35749 1972 aa13.47□□□□□ -0.25
TPT1-201ENST00000309246 PTPRZ1P23471 2315 aaPredicted RBP13.46□□□□□ -0.25
TPT1-201ENST00000309246 N4BP3O15049 544 aa13.46□□□□□ -0.25
TPT1-201ENST00000309246 ZMYND10O75800 440 aa13.46□□□□□ -0.25
Retrieved 100 of 20,778 RNA–protein pairs in 16.6 ms